Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,137,435 T→C N139D (AAT→GAT)  unknown ← Inner membrane protein of type IV secretion of T‑DNA complex, TonB‑like, VirB10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,137,4350TC100.0% 211.7 / NA 73N139D (AAT→GAT) unknownInner membrane protein of type IV secretion of T‑DNA complex, TonB‑like, VirB10
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/40);  total (33/40)

CGTTTGCACTATATACATCGTTTGCCACAACGCAGCCGAGATTGCCGGCCACGGTGGAAACAAGTTTTGTGCGTAAGGAACACTGAATAAAAGTGCCTTTTGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGCGCTTTACCCGCTTTAAACGTACTGACGTTATCTTCAAACATATCGCCTTTTGCCGGTTCCGGTGGTTGATTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATTTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGGGGGGCGGATGGAATATCTAACGCCTCTGTCGTACTATGATTTTCTACTGGAGCGGTTGCGGTAGGAATTGGTTGTGGCTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTA  >  1/1137192‑1137679
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
ccggcttgtaccgtatcagtcggattaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGaaa                                                                                                                                                                                                                                                 <  1:564717‑M2/148‑1 (MQ=255)
  ggcttgtaccgtatcagtcggattaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAAc                                                                                                                                                                                                                                                <  1:199476‑M2/149‑1 (MQ=255)
  ggcttgtaccgtatcagtcggattaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACgg                                                                                                                                                                                                                                              >  1:846658‑M2/100‑250 (MQ=255)
  ggcttgtaccgtatcagtcggattaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACgg                                                                                                                                                                                                                                              >  1:669835‑M2/100‑250 (MQ=255)
   gcttgtaccgtatcagtcggattaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACgg                                                                                                                                                                                                                                              >  1:14698‑M2/99‑249 (MQ=255)
                       attaaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGAt                                                                                                                                                                                                                        <  1:461564‑M2/173‑1 (MQ=255)
                          aaatgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGt                                                                                                                                                                                                                     >  1:312825‑M2/76‑251 (MQ=255)
                            atgtcccccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAATGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTAc                                                                                                                                                                                                                   <  1:204564‑M2/178‑1 (MQ=255)
                                  cccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGgag                                                                                                                                                                                                             <  1:443178‑M2/184‑1 (MQ=255)
                                   ccgtttggctaattgagtagataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGgaga                                                                                                                                                                                                            >  1:31311‑M2/67‑251 (MQ=255)
                                                     agataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTAc                                                                                                                                                                                                                   >  1:95516‑M2/49‑226 (MQ=255)
                                                      gataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGAc                                                                                                                                                                                                           <  1:317537‑M2/186‑1 (MQ=255)
                                                       ataatgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGt                                                                                                                                                                                                                     <  1:628103‑M2/176‑1 (MQ=255)
                                                           tgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGc                                                                                                                                                                                    <  1:421122‑M2/209‑1 (MQ=255)
                                                                 ggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACg                                                                                                                                                                                          <  1:221399‑M2/203‑1 (MQ=255)
                                                                       atcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATc                                                                                                                                                                        <  1:465065‑M2/221‑1 (MQ=255)
                                                                       atcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATc                                                                                                                                                                        <  1:762157‑M2/221‑1 (MQ=255)
                                                                           gtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTaa                                                                                                                                                                     >  1:53515‑M2/27‑250 (MQ=255)
                                                                                  tgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTaa                                                                                                                                                                     <  1:340545‑M2/224‑1 (MQ=255)
                                                                                  tgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCct                                                                                                                                                                >  1:735888‑M2/20‑248 (MQ=255)
                                                                                   gcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACg                                                                                                                                                                                          <  1:226926‑M2/203‑1 (MQ=255)
                                                                                   gcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCCTTGATTAAACg                                                                                                                                                                                          >  1:851247‑M2/19‑221 (MQ=255)
                                                                                        acatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCgtt                                                                                                                                                        >  1:824851‑M2/14‑249 (MQ=255)
                                                                                        acatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGGTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGt                                                                                                                                                            <  1:438377‑M2/233‑1 (MQ=255)
                                                                                         catgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGgag                                                                                                                                                                                                             <  1:119367‑M2/184‑1 (MQ=255)
                                                                                              tggcaatGCCAACAGTAAAGTGGAATTGACCGGGGGTTTATGGGCTTTACCTGCTTTAAACCTACTGGCGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGGATTCTGAACATCTGAAACGGCTTGTAACGTTTCGGCATCGGTAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAt                                                                                                                                                 <  1:711814/245‑1 (MQ=255)
                                                                                                 cattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAttt                                                                                                                                               <  1:572534‑M2/246‑1 (MQ=255)
                                                                                                  attGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAtttt                                                                                                                                              >  1:436239‑M2/4‑250 (MQ=255)
                                                                                                      ccAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTACAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTAc                                                                                                                                          <  1:93970/250‑1 (MQ=255)
                                                                                                          cAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACg                                                                                                                                                                                          <  1:118425/198‑1 (MQ=255)
                                                                                                            gTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGGACCGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGGTTCGCCATCGATAGTACCCGGAGACAATCCATTGATTAAACGTGGGGCGGATGGCATATCTAACGcc                                                                                                                                                                 <  1:427208/221‑1 (MQ=255)
                                                                                                             tAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAg                                                                                                                                     <  1:850764/248‑1 (MQ=255)
                                                                                                              aaaTTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGa                                                                                                                                                  <  1:60336/234‑1 (MQ=255)
                                                                                                                     cATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGt                                                                                                                           <  1:875313/250‑1 (MQ=255)
                                                                                                                                 gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtgt                                                                                                              >  1:726828/1‑251 (MQ=255)
                                                                                                                                 gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtgg                                                                                                              >  1:565268/1‑250 (MQ=255)
                                                                                                                                 gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAAAGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTTCGGTAggc                                                                                                                       >  1:46284/1‑241 (MQ=255)
                                                                                                                                         gcTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTAcc                                                                                                                                                                                                                  <  1:833901/143‑1 (MQ=255)
                                                                                                                                                  gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtg                                                                                                               <  1:642938/233‑1 (MQ=255)
                                                                                                                                                  gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAAt                                                                                             >  1:762/1‑251 (MQ=255)
                                                                                                                                                  gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAAt                                                                                             >  1:399249/1‑251 (MQ=255)
                                                                                                                                                                      aTCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTa                                                                                                                          <  1:826641/202‑1 (MQ=255)
                                                                                                                                                                        cTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAttt                                                                                                                                               >  1:398173/1‑179 (MQ=255)
                                                                                                                                                                        cTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCggtggg                                                                       >  1:186330/1‑250 (MQ=255)
                                                                                                                                                                           cAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCCTCGATAGTAccc                                                                                                                                                                                                                 >  1:552084/1‑110 (MQ=255)
                                                                                                                                                                               tatatCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGt                                                                                                                 >  1:593475/2‑202 (MQ=255)
                                                                                                                                                                               tatatCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTaa                                                                >  1:264328/2‑251 (MQ=255)
                                                                                                                                                                                  atCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATg                                                             <  1:484210/251‑1 (MQ=255)
                                                                                                                                                                                          ttGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGaa                                                     <  1:848378/251‑1 (MQ=255)
                                                                                                                                                                                                      gtggtTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACcgtcgt                                          <  1:395665/250‑1 (MQ=255)
                                                                                                                                                                                                       tggttggtTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTAc                                        <  1:50322/251‑1 (MQ=255)
                                                                                                                                                                                                          ttggttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCg                                      <  1:892278/246‑1 (MQ=255)
                                                                                                                                                                                                           tggttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAggc                                                                                                                       <  1:858321/165‑2 (MQ=255)
                                                                                                                                                                                                             gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGATACAATCCTTTGATTAAACGTGGGGCGGTTGGCATATCTAACGCCTCTGTCGTTCTATGCTTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGTGATTTCTTCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGCAtt                                  >  1:592228/2‑251 (MQ=255)
                                                                                                                                                                                                             gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCg                                                                                                                                                          >  1:245266/2‑131 (MQ=255)
                                                                                                                                                                                                             gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAAtt                                  >  1:132038/2‑251 (MQ=255)
                                                                                                                                                                                                             gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGGGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAAt                                   >  1:537108/2‑250 (MQ=255)
                                                                                                                                                                                                                        tgtCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTc                        >  1:117191/1‑250 (MQ=255)
                                                                                                                                                                                                                             gTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTaa                   >  1:48056/1‑250 (MQ=255)
                                                                                                                                                                                                                              ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                 <  1:519502/251‑1 (MQ=255)
                                                                                                                                                                                                                              ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                 <  1:712206/251‑1 (MQ=255)
                                                                                                                                                                                                                              ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                 <  1:366638/251‑1 (MQ=255)
                                                                                                                                                                                                                              ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                 <  1:537536/251‑1 (MQ=255)
                                                                                                                                                                                                                                 tATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGc                                                                                                                                                                  <  1:622623/103‑1 (MQ=255)
                                                                                                                                                                                                                                 tATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGttttgaa                                                      >  1:605665/1‑208 (MQ=255)
                                                                                                                                                                                                                                  aTCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGAt                                                                                                                                                                                                                        <  1:722007/48‑1 (MQ=255)
                                                                                                                                                                                                                                   tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGAt                                                                                                                                                                                                                        <  1:65046/47‑1 (MQ=255)
                                                                                                                                                                                                                                   tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                 >  1:829485/1‑246 (MQ=255)
                                                                                                                                                                                                                                   tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCtgtg             >  1:467966/1‑250 (MQ=255)
                                                                                                                                                                                                                                   tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCtgtg             >  1:88770/1‑250 (MQ=255)
                                                                                                                                                                                                                                        aTTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGtt       >  1:494765/1‑251 (MQ=255)
                                                                                                                                                                                                                                             gAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTg      <  1:106446/247‑1 (MQ=255)
                                                                                                                                                                                                                                             gAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTa  >  1:477622/1‑251 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
CGTTTGCACTATATACATCGTTTGCCACAACGCAGCCGAGATTGCCGGCCACGGTGGAAACAAGTTTTGTGCGTAAGGAACACTGAATAAAAGTGCCTTTTGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGCGCTTTACCCGCTTTAAACGTACTGACGTTATCTTCAAACATATCGCCTTTTGCCGGTTCCGGTGGTTGATTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATTTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGGGGGGCGGATGGAATATCTAACGCCTCTGTCGTACTATGATTTTCTACTGGAGCGGTTGCGGTAGGAATTGGTTGTGGCTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTA  >  1/1137192‑1137679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑