| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 134,784 | G→A | intergenic (+53/+421) | unknown → / ← unknown | 1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase/Putative sugar isomerase involved in processing of exogenous sialic acid |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 134,784 | 0 | G | A | 100.0% | 242.9 / NA | 89 | intergenic (+53/+421) | unknown/unknown | 1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase/Putative sugar isomerase involved in processing of exogenous sialic acid |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (49/40); total (49/40) | |||||||||||
GCAATGAACAGCCGTTTACCACACAGCAATATGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATGCCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCAAAAAATATTAAGGAAAATGAATGGAGTGG > 1/134550‑135026 | gCAATGAACAGCCGTTTACCACACAGCAATATGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTag > 1:830277/1‑250 (MQ=255) aTGAACAGCCGTTTACCACACAGCAATATGACACGCTACAACGCATAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTagcag > 1:267674/1‑250 (MQ=255) gCCGTTTACCACACAGCAATATGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCtgattga > 1:734985/1‑251 (MQ=255) caGCAATATGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGaaa > 1:607174/1‑251 (MQ=255) atGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAAttttt > 1:591648/1‑249 (MQ=255) cTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAGCAGAAAAATACCGTTGTTTTTTTagc > 1:470021/1‑213 (MQ=255) aaCCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGCGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAgg < 1:161374/251‑1 (MQ=255) aCCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAggg < 1:183721/251‑1 (MQ=255) ccGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAg < 1:333225/251‑1 (MQ=255) aTGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGat > 1:266931/1‑251 (MQ=255) aTGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTCGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGat > 1:609646/1‑251 (MQ=255) ggCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGa > 1:788633/1‑235 (MQ=255) gATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAc < 1:585722/250‑1 (MQ=255) aTTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAccc < 1:572817/251‑1 (MQ=255) gCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAAcaca > 1:270579/1‑251 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAgg < 1:135124/175‑1 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTttcttc > 1:694324/1‑187 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAggg < 1:470721/205‑1 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAg > 1:790262/1‑207 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAAtt > 1:210715/1‑251 (MQ=255) ttGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAAtt > 1:77056/1‑251 (MQ=255) ttGTAGGGCAATGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAAtt > 1:388329/1‑251 (MQ=255) gCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATcc < 1:398843/250‑1 (MQ=255) ttGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATggg > 1:343523/1‑205 (MQ=255) gtgtCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGa > 1:22651/1‑245 (MQ=255) tgtCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTg < 1:388881/251‑1 (MQ=255) tgtCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTg < 1:90996/251‑1 (MQ=255) ggCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTc < 1:172593/250‑1 (MQ=255) gAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACaa > 1:543672/1‑251 (MQ=255) tCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaa < 1:36465/251‑1 (MQ=255) tCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaa < 1:802629/251‑1 (MQ=255) ccGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaaa > 1:837988/1‑251 (MQ=255) aCAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaaaa < 1:837348/247‑1 (MQ=255) tGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTg < 1:144247/251‑1 (MQ=255) gTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGa < 1:727268/140‑1 (MQ=255) aTTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAgg > 1:522984/1‑106 (MQ=255) aTTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAcccc > 1:614024/1‑167 (MQ=255) aTTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAAt > 1:853994/1‑251 (MQ=255) aCATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTgg > 1:50933/1‑251 (MQ=255) cATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAccc > 1:533533/1‑158 (MQ=255) tttATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAg > 1:880430/1‑128 (MQ=255) tttATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAcc < 1:884919/155‑1 (MQ=255) gAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAgg > 1:200822/1‑199 (MQ=255) aGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGTCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGc < 1:60840/250‑1 (MQ=255) gAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATaa < 1:872822/185‑1 (MQ=255) cAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTg > 1:274664/1‑177 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAcc < 1:688647/140‑1 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTc > 1:252837/1‑183 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAgg < 1:710746/189‑1 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTAtt < 1:325445/238‑1 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGAt < 1:540817/251‑1 (MQ=255) ataaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGAt > 1:774462/1‑251 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTcac < 1:123022/184‑1 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTc < 1:865266/182‑1 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTc < 1:756605/182‑1 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTc > 1:38855/1‑182 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaa < 1:588110/196‑1 (MQ=255) taaataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTg < 1:49215/215‑1 (MQ=255) aataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATcc < 1:893669/160‑1 (MQ=255) aataTACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTtg > 1:538001/1‑251 (MQ=255) atatACAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTtgt > 1:727358/1‑251 (MQ=255) ataCAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTtgtg > 1:490064/1‑250 (MQ=255) ataCAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGc < 1:296352/251‑1 (MQ=255) cAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTg < 1:673173/207‑1 (MQ=255) cAGTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCaaa > 1:147212/1‑251 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAAtt > 1:82663/1‑75 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAggg < 1:767503/179‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaa < 1:253003/186‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAAt < 1:87503/203‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTg > 1:126993/1‑205 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTg < 1:858017/205‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGtt > 1:735072/1‑220 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAAc > 1:269002/1‑235 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAg < 1:533276/237‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTtgtg < 1:366353/245‑1 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCaaaaa > 1:194172/1‑251 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCaaaaa > 1:116859/1‑251 (MQ=255) gTATAAAACGGCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAA‑TTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTaaaaa > 1:514013/1‑187 (MQ=255) gCATTTTTCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCAAAAAATATTAAgg < 1:23317/250‑1 (MQ=255) tttCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGc > 1:305697/1‑147 (MQ=255) tttCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAAtt < 1:252188/201‑1 (MQ=255) ttCATTAACAGAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCaa > 1:790630/1‑180 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATggg < 1:154782/84‑1 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATAc > 1:573902/1‑102 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGaa > 1:851908/1‑140 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGaa > 1:668634/1‑140 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAg > 1:582260/1‑211 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCAAAAAATATTAAGGAAAATGAATgg > 1:667807/1‑245 (MQ=255) gAAAAATACCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCAAAAAATATTAAGGAAAATGAATGGAgcgg > 1:356613/1‑247 (MQ=255) | GCAATGAACAGCCGTTTACCACACAGCAATATGACACGCTACAACGCTTAACCCGACAAATTATGCAGGCGTATCCGCGGATTACCAAAGAACGCATTGTAGGGCATTGTGATGTGTCGCCGGGGCGAAAAATCGATCCGGGACAATATTTCGATTGGCAGCGTTATTTGCAACATTTATGAGTTGAACAATAAATATACAGTATAAAACGGCATTTTTCATTAACAGAAAAATGCCGTTGTTTTTTTAGCAGCTGATTGATGAATAAAGGAAATTTTTCTTCTGATTTCACTCCATAGGGAGTTTATGGGATTTATTTCAAGTTATACCCCCGCTAAAACACAATTTTATCCACAGAAATGCTGAATAACTCACAAGGGGGTTAAAAATGTGGCAAGTCAAATTGAGTGAAAAATTCGTTGGTTATTTGCTAAACAGGATTTGTGCAAAAAATATTAAGGAAAATGAATGGAGTGG > 1/134550‑135026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |