| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 132,648 | G→A | P130S (CCT→TCT) | unknown ← | Type IV fimbrial assembly, ATPase PilB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 132,648 | 0 | G | A | 100.0% | 229.2 / NA | 84 | P130S (CCT→TCT) | unknown | Type IV fimbrial assembly, ATPase PilB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (39/45); total (39/45) | |||||||||||
AACGTTGGGCGATCACCAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGTGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGGGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTGCACGGGACGATTTT > 1/132402‑132893 | aaCGTTGGGCGATCACCAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGa < 1:422170/251‑1 (MQ=255) gCGATCACCAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACtt < 1:754870/250‑1 (MQ=255) cGATCACCAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAACCCAAGCCGATAGAGTGATTCACTTg < 1:374150/250‑1 (MQ=255) cAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGaa > 1:477096/1‑251 (MQ=255) gCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATCATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGaata > 1:452638/1‑251 (MQ=255) tCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTc < 1:317695/251‑1 (MQ=255) tCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAAGGGCGCGGTTGGCCTGTAGCGTCGAAAGCGCCAAATTCCCCCATTTCGCGGCGCGGAATCCCATGGCGGCCCTTTCTTTATCACGAATTTCACCTAACATAATAATGTTCGGATCTTTGCGTAAAAAGGGGCGCAGCAATCGGCTGAAATCCAAGCCCATAGAGTGATTTACTTCGCTTTGCATAATGCCTGGGAGCTGAAtttt > 1:634500/1‑250 (MQ=255) gCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCtttcg > 1:146891/1‑248 (MQ=255) ccGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTccgc < 1:610985/251‑1 (MQ=255) ccGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTccgc < 1:744180/251‑1 (MQ=255) gttgttGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCAc < 1:441395/199‑1 (MQ=255) gttgttGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGaat < 1:681405/211‑1 (MQ=255) ggCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAAtg > 1:541442/1‑238 (MQ=255) ggCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACg > 1:819340/1‑251 (MQ=255) gCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:103006/250‑1 (MQ=255) gCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:353227/250‑1 (MQ=255) gCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:289755/250‑1 (MQ=255) cgtcgtTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTAc < 1:770447/251‑1 (MQ=255) tcgtTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAAt < 1:157133/203‑1 (MQ=255) tcgtTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTa > 1:278424/1‑248 (MQ=255) cgtTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTg > 1:480235/1‑250 (MQ=255) ttGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTc > 1:124549/1‑162 (MQ=255) ttGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTcc < 1:45554/210‑1 (MQ=255) ttGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAAtg > 1:653316/1‑222 (MQ=255) ttGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCaa > 1:39636/1‑251 (MQ=255) ttGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCaa > 1:159659/1‑251 (MQ=255) ggTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:313255/242‑1 (MQ=255) ggTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACg > 1:592306/1‑251 (MQ=255) gTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACg > 1:107761/1‑250 (MQ=255) gTAGCGTCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTc > 1:324861/1‑155 (MQ=255) tCGAAAGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATaaa < 1:36307/251‑1 (MQ=255) aaaGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGa < 1:565730/250‑1 (MQ=255) aaaGCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGa < 1:248866/250‑1 (MQ=255) gCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt > 1:564348/1‑225 (MQ=255) gCACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTAc > 1:899389/1‑227 (MQ=255) cACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACg < 1:787335/215‑1 (MQ=255) cACCAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATa > 1:222354/1‑250 (MQ=255) ccAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACtt > 1:809688/1‑251 (MQ=255) ccAAATGCCCCGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACtt > 1:701163/1‑251 (MQ=255) cGTTTGCGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGc > 1:743845/1‑222 (MQ=255) gcgcGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:411764/202‑1 (MQ=255) aTGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCAc > 1:129205/1‑115 (MQ=255) tttCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTtgt > 1:615816/1‑251 (MQ=255) cttcATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGc > 1:836888/1‑210 (MQ=255) tcaCGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt > 1:608470/1‑172 (MQ=255) gAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTc < 1:376777/248‑1 (MQ=255) aTTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGc < 1:739395/251‑1 (MQ=255) aCCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTAc < 1:743308/163‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt < 1:317619/156‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGc < 1:298837/166‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATaaa < 1:840287/176‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAg > 1:401496/1‑177 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGa < 1:900570/178‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGc < 1:462160/241‑1 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGaaaa > 1:147794/1‑251 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGaaaa > 1:348714/1‑251 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGaaaa > 1:874217/1‑251 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGaaaa > 1:414705/1‑251 (MQ=255) aCATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGaaaa > 1:222826/1‑251 (MQ=255) ataataATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTAttt > 1:583186/1‑150 (MQ=255) tGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCaa < 1:714230/154‑1 (MQ=255) gTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGt > 1:626815/1‑146 (MQ=255) gTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTg > 1:494697/1‑249 (MQ=255) gATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACg < 1:843613/132‑1 (MQ=255) tCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTc < 1:594354/251‑1 (MQ=255) tCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTc < 1:839601/251‑1 (MQ=255) gCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGa > 1:140195/1‑156 (MQ=255) gCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGc < 1:543146/219‑1 (MQ=255) gCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTc < 1:100148/250‑1 (MQ=255) gCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTc < 1:433076/250‑1 (MQ=255) cGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAg > 1:664960/1‑154 (MQ=255) cGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCa < 1:300808/250‑1 (MQ=255) aaaaGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGccc < 1:783934/251‑1 (MQ=255) aaaaGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGccc < 1:843341/251‑1 (MQ=255) gTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTc < 1:409224/240‑1 (MQ=255) cGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCAcc < 1:824306/251‑1 (MQ=255) cGAAGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCAcc < 1:650252/251‑1 (MQ=255) aaGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGa < 1:138858/251‑1 (MQ=255) aaGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGa < 1:516150/251‑1 (MQ=255) aaGCAATCGGCTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGa < 1:605204/251‑1 (MQ=255) cTGAAATCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTg < 1:715482/251‑1 (MQ=255) aTCCAAGCCGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTGCACgg > 1:469522/1‑251 (MQ=255) ccGATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTGCACGGGACGAtt > 1:255583/1‑251 (MQ=255) gATAGAGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTGCACGGGACGAtttt > 1:141050/1‑251 (MQ=255) | AACGTTGGGCGATCACCAGCAACAAACTGCCGTCGATTTCATGGCGTTGAATGCCGAGTTGTTGCAGGCGGGAAATGGCGGAAGGGGCGTCGTTGGTATGTAGCGTCGAAAGCACCAAATGCCCCGTTTGTGCGGCGCGTAATGCCATGGCGGCACTTTCTTCATCACGAATTTCACCTAACATAATAATGTCCGGATCTTGGCGTAAAAAGGTGCGAAGCAATCGGCTGAAATCCAAGCCGATAGGGTGATTCACTTGGCTTTGAATAATGCCTGGGAGCTGAATTTCAATGGGATCTTCCGCCGTCATAATGTGTTTTTCAGACGTATTTAAGTACTGCAACGCCGTATATAAAGAAATACTTTTGCCGCTGCCTGTCGGACCGGTGACTAAAATCAAGCCTTGTGGTTGGCTCAAGGCACGACGAAAACGCTGTTGCTGTGATTCCGTCATGCCCAGTTCACCGAATGCCAGTTGCACGGGACGATTTT > 1/132402‑132893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |