| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,133,849 | A→T | V77D (GTT→GAT) | unknown ← | 3‑hydroxy‑5‑phosphonooxypentane‑2,4‑dione thiolase (EC 2.3.1.245) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,133,849 | 0 | A | T | 100.0% | 207.5 / NA | 77 | V77D (GTT→GAT) | unknown | 3‑hydroxy‑5‑phosphonooxypentane‑2,4‑dione thiolase (EC 2.3.1.245) |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (46/31); total (46/31) | |||||||||||
ACGTCGAGAAATTCCAGCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGAACAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAAGGATCGTTGTA > 1/1133607‑1134091 | aCGTCGAGAAATTCCAGCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGc < 1:315984/250‑1 (MQ=255) aaaaTTCCAGCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGc < 1:467122/250‑1 (MQ=255) ttCCAGCTCTTTACTTTCCTTGATATTAATTTCTCCCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCTTGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACat < 1:901461/251‑1 (MQ=255) gCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCa > 1:658099/1‑251 (MQ=255) gCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATA‑TACCCCCCATTTCCACCCCCGAAGCCCCTTGATCAATTGCttttgaacacatattccg > 1:525176/1‑236 (MQ=255) ctctTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATcc < 1:651317/249‑1 (MQ=255) ctctTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAg > 1:69430/1‑251 (MQ=255) ctctTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAg > 1:297464/1‑251 (MQ=255) tctTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAg > 1:726/1‑250 (MQ=255) tctTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAg > 1:247114/1‑250 (MQ=255) tttACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAgcgc < 1:261620/251‑1 (MQ=255) tccttGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATcc < 1:724105/239‑1 (MQ=255) cttGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCAGGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTc < 1:438430/251‑1 (MQ=255) atatTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAgcgc > 1:184836/1‑238 (MQ=255) cTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTa > 1:653086/1‑250 (MQ=255) cATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACat < 1:554880/212‑1 (MQ=255) aTTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCa > 1:825462/1‑251 (MQ=255) aTTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCa > 1:837450/1‑251 (MQ=255) cATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAgcgc > 1:360785/1‑212 (MQ=255) cATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAAt > 1:832845/1‑251 (MQ=255) aaaCAGACTCTTTATTGAAAAAAATGAAAAATACTACGCATTTTTTTCAGGCAGATATAATTGATAGGCTTTTTCTGCATTCTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCg < 1:448564/250‑1 (MQ=255) aGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTa > 1:347333/1‑250 (MQ=255) aGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTa > 1:455215/1‑250 (MQ=255) cccctttATTGCAAAAAATGAGAAATACTACGATTTTTTTTCATGCAAATATAATTGATAGGTTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTAc < 1:77690/244‑1 (MQ=255) ccTCCTTATTGCAAAAAATGAGAAATACTCCGCATTTTTTTCAGGCAGATATAATTGATAGGTTTTTTCCGCTTTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTAc < 1:134159/248‑1 (MQ=255) ccTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATATTTGATGGGTTTTTTCTGCTTTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGc < 1:687589/251‑1 (MQ=255) ccTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCggg > 1:249962/1‑250 (MQ=255) ataaaaaatcctccGCATTTTTTTCATGAAGATATAATTGTTAGGTTTTTTCTGAATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTaca < 1:560947/238‑1 (MQ=255) gagaAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTCGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACg > 1:430973/1‑251 (MQ=255) gagaAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACg > 1:745865/1‑251 (MQ=255) aatcctacGCTTTTTTTTCAGGCAGATATAATTGATAGCTTTTTTCTGCATTTCCCCCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCa < 1:861363/247‑1 (MQ=255) tttttttCGTGCAGATATAATTGATGGGCTTTTTCTGCTTTTCCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATc < 1:339775/251‑1 (MQ=255) gATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGcac < 1:383418/146‑1 (MQ=255) gATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGc > 1:851517/1‑207 (MQ=255) gATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATc < 1:658442/238‑1 (MQ=255) gATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGtt > 1:376991/1‑251 (MQ=255) gATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGtt > 1:578235/1‑251 (MQ=255) atatAATTGATAGTCTTTTTCTGCTTTTCCCCCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAgg < 1:344494/248‑1 (MQ=255) atatAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGcc > 1:474262/1‑231 (MQ=255) atatAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGttt > 1:557186/1‑251 (MQ=255) atatAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGttt > 1:734142/1‑251 (MQ=255) ataaaaTTGATAGGTTTTTTCTCCTTTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAgg < 1:774849/244‑1 (MQ=255) aTTGATAGGCTTTTTCTGCTTTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTtgatg < 1:249306/251‑1 (MQ=255) tgggttttttCTGCTTTTTCCCCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACGCCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATg < 1:760160/246‑1 (MQ=255) ccgTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATAc < 1:275178/250‑1 (MQ=255) ccgTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACg < 1:493595/251‑1 (MQ=255) gAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTacac < 1:627108/183‑1 (MQ=255) aaCGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATcc < 1:105610/112‑1 (MQ=255) aCGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTtgatg > 1:460113/1‑216 (MQ=255) aTGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCaa > 1:621483/1‑251 (MQ=255) ggCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTccgc > 1:166020/1‑231 (MQ=255) gCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATcc > 1:735248/1‑96 (MQ=255) gCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACataat > 1:324321/1‑190 (MQ=255) cTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAgcg > 1:384607/1‑250 (MQ=255) tttAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTg < 1:105738/251‑1 (MQ=255) tAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATc > 1:883985/1‑177 (MQ=255) tGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGcc < 1:192983/251‑1 (MQ=255) gAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCg > 1:472451/1‑251 (MQ=255) aGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGAc > 1:52923/1‑103 (MQ=255) aGATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGtt > 1:734054/1‑251 (MQ=255) gATATTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTAcc > 1:782415/1‑240 (MQ=255) tatTACGCCCCATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACataat > 1:899624/1‑153 (MQ=255) cccATATCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTccgc > 1:86127/1‑176 (MQ=255) tatCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATc > 1:889093/1‑220 (MQ=255) tatCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCgg > 1:491176/1‑250 (MQ=255) atCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCa > 1:746811/1‑251 (MQ=255) atCCACACCGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCACCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCa > 1:429403/1‑251 (MQ=255) cccgGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgt < 1:710553‑M1/250‑5 (MQ=255) cccgGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgt < 1:39037‑M1/250‑5 (MQ=255) ccGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgta > 1:556107‑M1/1‑246 (MQ=255) cGGAAGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgtaa < 1:871892‑M1/251‑7 (MQ=255) aaGCCCCTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgtaacgc < 1:734255‑M1/251‑10 (MQ=255) ccccTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGtt > 1:30516/1‑131 (MQ=255) ccccTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTAcc > 1:41279/1‑211 (MQ=255) ccccTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgtaacgcgt > 1:465528‑M1/1‑239 (MQ=255) cccTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgtaacgcgtc > 1:60543‑M1/1‑238 (MQ=255) cccTTGATCAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGGTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAccgtaacgcg > 1:538015‑M1/1‑238 (MQ=255) | ACGTCGAGAAATTCCAGCTCTTTACCTTCCTTGATATTAATTTCTACCAACATTGCAAACATAACAGACTCCTTATTGCAAAAAATGAGAAATACTACGCATTTTTTTCATGCAGATATAATTGATAGGCTTTTTCTGCATTTTCACCGCCGTGAACGATGGCATGTACCGCTTTTAACATGGCAATCGGCGCGTCGGATTGGAAGATATTACGCCCCATATCCACACCGGAAGCCCCTTGAACAATGGCTTTGTAGCACATATCCAGCGCCTCTTGTTCCGGGAGTTTTTTACCGCCGGCAATGACAATCGGTACCGGGCAACCGGCAGTTACACGTTCAAAGCCTTTATCCACATAATAGGTTTTGATGATATGCGCACCCATTTCCGCCGCGATACGGGTTGCCAAGGAAAAATAGCGCTGATCCCGCGCCATATCTTTACCTACGCCCGTTACCGCCATGGTCGGCATAAGGATCGTTGTA > 1/1133607‑1134091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |