| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,048,676 | T→C | V325A (GTG→GCG) | unknown → | Glycogen synthase, ADP‑glucose transglucosylase (EC 2.4.1.21) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,048,676 | 0 | T | C | 100.0% | 233.8 / NA | 83 | V325A (GTG→GCG) | unknown | Glycogen synthase, ADP‑glucose transglucosylase (EC 2.4.1.21) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/39); total (44/39) | |||||||||||
ATCTTAAACGGGGTCGATGAAAAAATCTGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGTGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGTTTGGCGGATACAGTGGTTA > 1/1048432‑1048921 | aTCTTAAACGGGGTCGATGAAAAAATCTGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGAtt > 1:630320/1‑249 (MQ=255) gggTCGATGAAAAAATCTGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAgg > 1:559811/1‑250 (MQ=255) aTGAAAAAATCTGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGcgcaccg < 1:17241/251‑1 (MQ=255) tGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGt < 1:885549/251‑1 (MQ=255) cccGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGaa > 1:655465/1‑251 (MQ=255) gAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAAtt > 1:567985/1‑250 (MQ=255) aTCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTa > 1:751181/1‑251 (MQ=255) tCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAg > 1:513279/1‑251 (MQ=255) tCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAg > 1:153156/1‑251 (MQ=255) cAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGcgcac < 1:687190/220‑1 (MQ=255) cAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAg > 1:567103/1‑250 (MQ=255) aTACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGa > 1:666781/1‑251 (MQ=255) cACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATcc < 1:160182/251‑1 (MQ=255) cgTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGa < 1:759724/241‑1 (MQ=255) aTTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTg > 1:793564/1‑251 (MQ=255) ttGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGcgcaccg > 1:97716/1‑198 (MQ=255) gAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGc < 1:498591/249‑1 (MQ=255) gggAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGt > 1:267662/1‑227 (MQ=255) ggAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATg < 1:367234/249‑1 (MQ=255) aaaaTAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAAc > 1:79359/1‑221 (MQ=255) aaGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATcc < 1:185441/251‑1 (MQ=255) aaGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATcc < 1:694773/251‑1 (MQ=255) aaGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATcc < 1:553237/251‑1 (MQ=255) gATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCAttt > 1:43530/1‑251 (MQ=255) aTCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCAttt < 1:776813/250‑1 (MQ=255) tCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTaa > 1:187402/1‑251 (MQ=255) tCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTaa > 1:147288/1‑251 (MQ=255) cTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGAtt > 1:181354/1‑141 (MQ=255) cTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAAt > 1:302152/1‑251 (MQ=255) ggCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATcc > 1:378148/1‑238 (MQ=255) gCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGc < 1:762758/247‑1 (MQ=255) gCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGc < 1:342974/247‑1 (MQ=255) gCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGc < 1:97111/247‑1 (MQ=255) tATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGa < 1:631633/158‑1 (MQ=255) tCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCggg > 1:117666/1‑251 (MQ=255) cAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCgggg < 1:497319/251‑1 (MQ=255) aCTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCgggggt > 1:861796/1‑249 (MQ=255) tACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGAtgtg > 1:189403/1‑251 (MQ=255) cGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGAtt < 1:737968/251‑1 (MQ=255) caATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAg < 1:84505/250‑1 (MQ=255) caATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGt < 1:902044/251‑1 (MQ=255) aTCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTg > 1:898174/1‑182 (MQ=255) aTCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATGCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTcc < 1:126402/251‑1 (MQ=255) ttgtttgtGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTg < 1:890473/250‑1 (MQ=255) tgtttgtGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATc < 1:573162/156‑1 (MQ=255) tgtctgcgATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGCAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGAAGTGGTTTTAGTTCCAAATCGCTTTGAg > 1:648652/8‑251 (MQ=255) gtttgtGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAggctggctcttt > 1:169668/1‑240 (MQ=255) gtttgtGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGtttttag > 1:225060/1‑247 (MQ=255) gtgATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCttt > 1:351110/1‑250 (MQ=255) tCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGttt < 1:534855/250‑1 (MQ=255) cACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTAAGATGAAGCGTTATccc > 1:428247/1‑188 (MQ=255) aCCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAAc < 1:99046/251‑1 (MQ=255) ccGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAAccc < 1:282699/251‑1 (MQ=255) tAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGcc < 1:514869/232‑1 (MQ=255) tAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATta < 1:549814/251‑1 (MQ=255) gAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAGGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGAtt < 1:467208/204‑1 (MQ=255) gAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGTGCCTT‑TCGGGTTAACCCAATTATACgg > 1:673405/1‑251 (MQ=255) ggCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAg > 1:169667/1‑91 (MQ=255) ggCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAATATCGGCTACGATGAAGCGTTATCCCATTTAATACTTGCCGTCGGGGATGTGATTTTTGTGCCAAGTCGATTTTAGCCTT‑GCGGTTTGATCCAATTATACCGCCTGAAATa > 1:261385/1‑251 (MQ=255) gCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAAt < 1:240513/249‑1 (MQ=255) gATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGc < 1:41303/128‑1 (MQ=255) gATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCCAGTCGTTTTTAGCCTT‑GCGGTTTAACCCCATTATACGGACTGAAATACGGca > 1:875124/1‑250 (MQ=255) cTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGcc > 1:560459/1‑168 (MQ=255) cTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGGTGGGATTTTAGTCCCAAGTCGTTTTGAGCCTTGGGGGTTTAA‑CCAATTTTACGGACTGAAATAAGGCACATTat > 1:867729/1‑249 (MQ=255) cTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTTAGCCTT‑GCGGTTTAACCCAATTATACgg > 1:605499/1‑230 (MQ=255) cTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGAAGTGATTTTAGTCCCAAGTCGGTTTGAGCCTT‑GCGGGTTTACCCCATTTTACGGACTGAAATAAGGCACAATAc > 1:505878/1‑250 (MQ=255) tGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCa < 1:696286/251‑1 (MQ=255) tGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCa < 1:149828/251‑1 (MQ=255) gTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAAccc < 1:842604/218‑1 (MQ=255) gTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCAt > 1:715110/1‑251 (MQ=255) gTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGGTTAACCCAATTATACGGACTGAAATACGGCACATTACCa > 1:731877/1‑250 (MQ=255) ggAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATAc < 1:719496/235‑1 (MQ=255) aaaGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTc < 1:473216/251‑1 (MQ=255) tCGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACgg < 1:584601/220‑1 (MQ=255) cGTTAAACAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGGTTAACCCAATTATACGGACTGAAATAc > 1:145236/1‑217 (MQ=255) aaaCAAGGCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAAccc < 1:585958/193‑1 (MQ=255) ggCGGGCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGTTTGGCGGATaa > 1:59668/1‑250 (MQ=255) gggCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGGTTGGCGGATACAgg > 1:682724/1‑250 (MQ=255) ggCAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCa < 1:687388/215‑1 (MQ=255) cAACTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGTTTGGCGGATACAGTgg < 1:405956/250‑1 (MQ=255) aCTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGTTTGGCGGATACAGTGGTTa > 1:528555/1‑251 (MQ=255) aCTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGGGGCTTTGCGGAGACAGTgggta > 1:256705/1‑248 (MQ=255) cTTGCGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGGTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTc > 1:124331/1‑216 (MQ=255) | ATCTTAAACGGGGTCGATGAAAAAATCTGGCACCCGAATTGCGATCAATACATTCAGCACGCGTATAAATTGAAATACATGGGCGGAAAAGGGAAAAATAAAGCGGATCTACAGGCTTATTTCAACTTACCGCAGCAATCTGATGCGCTGTTGTTTGTGATGGTCACCCGCTTAACGGAACAAAAAGGCGTGGATTTACTGTTGGAAAGCGCCGATGAAATCGTTAAACAAGGCGGGCAACTTGTGATTCTTGGCTCAGGCGCACCGCACTTGGAAGTGGGAATTCGCAAATTAGCGAAAGATTATCCGCAGAACGTTGCCGTGAAAATCGGCTACGATGAAGCGTTATCCCATTTAATGCTTGCCGGCGGGGATGTGATTTTAGTCCCAAGTCGTTTTGAGCCTT‑GCGGTTTAACCCAATTATACGGACTGAAATACGGCACATTACCATTAGTCCGCGCAACCGGTGGTTTGGCGGATACAGTGGTTA > 1/1048432‑1048921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |