| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,048,205 | T→C | L168P (CTG→CCG) | unknown → | Glycogen synthase, ADP‑glucose transglucosylase (EC 2.4.1.21) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,048,205 | 0 | T | C | 100.0% | 212.8 / NA | 77 | L168P (CTG→CCG) | unknown | Glycogen synthase, ADP‑glucose transglucosylase (EC 2.4.1.21) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/36); total (41/36) | |||||||||||
TTTGTACGCACGCGAAGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCTGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCTTGGTGGGTATCTTAAAC > 1/1047960‑1048440 | tttGTACGCACGCGAAGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTg > 1:514944/1‑251 (MQ=255)tttGTACGCACGCGAAGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAAC‑GGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGa < 1:54779/251‑1 (MQ=255) cgcgAAGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCa < 1:78112/251‑1 (MQ=255) aGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCatttat > 1:199117/1‑251 (MQ=255) tCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGAt > 1:392863/1‑226 (MQ=255) aTGCCAATTACAACGATTACGGCGACAATTATAAGCGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTTGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGcc < 1:190920/250‑1 (MQ=255) cAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAg > 1:192200/1‑251 (MQ=255) aaTTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGa > 1:41331/1‑251 (MQ=255) taAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAAt < 1:738076/251‑1 (MQ=255) cGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAAttctt > 1:78035/1‑251 (MQ=255) gCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACa > 1:36080/1‑251 (MQ=255) cccTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACa < 1:857195/250‑1 (MQ=255) cTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAAt > 1:109214/1‑251 (MQ=255) gttgggttggGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAAttt > 1:235198/1‑251 (MQ=255) gggttgggtCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCtt > 1:616851/1‑251 (MQ=255) gttgggtCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTa < 1:597904/250‑1 (MQ=255) ggtCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTg < 1:580421/164‑1 (MQ=255) gTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTc < 1:323008/203‑1 (MQ=255) gTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGc > 1:538749/1‑250 (MQ=255) gTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGc > 1:777639/1‑250 (MQ=255) ggCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTAtatt > 1:327043/1‑251 (MQ=255) aTCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTc < 1:71262/251‑1 (MQ=255) aTCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTc < 1:37018/251‑1 (MQ=255) ggTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTatat < 1:458622/243‑1 (MQ=255) ggTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGa > 1:756930/1‑251 (MQ=255) tttGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGAtg < 1:847736/251‑1 (MQ=255) gCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTc < 1:611257/238‑1 (MQ=255) tggtggCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCAcggc < 1:641685/251‑1 (MQ=255) gcgcAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAg > 1:75801/1‑250 (MQ=255) cgcAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCGCCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGcc < 1:97977/251‑1 (MQ=255) cgcAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGc > 1:615951/1‑213 (MQ=255) gAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTtat > 1:322100/1‑217 (MQ=255) gAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGa > 1:150637/1‑250 (MQ=255) gtgCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCAcggc > 1:279311/1‑233 (MQ=255) tGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCgaaag < 1:175758/251‑1 (MQ=255) gCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCgaaaga > 1:772797/1‑251 (MQ=255) cccACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCgaaagaa > 1:335535/1‑251 (MQ=255) cGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTa > 1:468045/1‑251 (MQ=255) aCGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCg > 1:710740/1‑251 (MQ=255) ggATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAACGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAAtt > 1:120819/1‑251 (MQ=255) gcgTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTatat > 1:314486/1‑177 (MQ=255) gcgTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTTCGTACGGttt > 1:107071/1‑251 (MQ=255) gTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTc < 1:261905/190‑1 (MQ=255) tATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTa < 1:668249/155‑1 (MQ=255) tATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGAcc < 1:598872/207‑1 (MQ=255) tATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGAcc < 1:557074/207‑1 (MQ=255) tATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACa > 1:653931/1‑251 (MQ=255) ttATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAgg < 1:51505/251‑1 (MQ=255) tataTCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGt < 1:749510/251‑1 (MQ=255) atatCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAAt < 1:602607/131‑1 (MQ=255) tCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGc < 1:738529/156‑1 (MQ=255) tCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTc > 1:558621/1‑171 (MQ=255) tCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGAcc < 1:200257/199‑1 (MQ=255) tCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGc > 1:473497/1‑221 (MQ=255) tCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTAt > 1:634556/1‑251 (MQ=255) cATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAAttctt < 1:898862/131‑1 (MQ=255) cATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTAtt > 1:528862/1‑251 (MQ=255) cGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCActct < 1:107526/251‑1 (MQ=255) gCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTatat < 1:890657/150‑1 (MQ=255) gTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAgg > 1:888410/1‑251 (MQ=255) cGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGt > 1:8644/1‑251 (MQ=255) gtgtTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGAcc < 1:67237/174‑1 (MQ=255) gtgtTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCg > 1:786708/1‑251 (MQ=255) gtgtTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCg > 1:828732/1‑251 (MQ=255) gtgtTCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCg > 1:655773/1‑251 (MQ=255) ttCACCATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCtt < 1:672292/251‑1 (MQ=255) ccATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCg > 1:279846/1‑173 (MQ=255) ccATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAgg < 1:493138/214‑1 (MQ=255) ccATTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCTtggtg < 1:786884/251‑1 (MQ=255) aTTCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTAtattat < 1:693196/135‑1 (MQ=255) ttCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTc > 1:359085/1‑74 (MQ=255) ttCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCAtgt > 1:591258/1‑79 (MQ=255) tCATAATCTGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCTTGGTGGGTa > 1:402137/1‑251 (MQ=255) tGGCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCTTGGTGGGTATCTTAAAc < 1:378242/251‑1 (MQ=255) ggcatATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGAtg < 1:325338/127‑1 (MQ=255) ggCGTATCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTc < 1:693902/230‑1 (MQ=255) aTCAAGGTCCGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGt > 1:469754/1‑224 (MQ=255) | TTTGTACGCACGCGAAGGTAATCCTTATCACGATGCCAATTACAACGATTACGGCGACAATTATAAACGCTTCGCCCTGTTGGGTTGGGTCGGTGCAGAACTGGCGATCGGTTTGGACAGCTGGTGGCGCGCAGAAGTGGTGCATGCCCACGACTGGCACGCCGGATTGACCGCCGCGTATTTATATCATAAAGGTCGCCCTGCCAAGTCGGTGTTCACCATTCATAATCTGGCGTATCAAGGTCTGTTTGATTATCGCCATTTATTTGAAATCGGTTTGCCGGCAGAAATGTTCCATGTGAACGGTTTGGAATTCTTCGGACAAATTTCTTATTTGAAAGCCGGTTTATATTATTCCGATGTGGTCACGGCGGTGAGCCCGACCTATGCGAAAGAAATTACCACGCCGGAATTTGCGTACGGTTTACAAGGTTTATTGTCCACTCTCGATCAAGAGGGTCGCTTGGTGGGTATCTTAAAC > 1/1047960‑1048440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |