Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,038,477 A→G T144T (ACT→ACC)  unknown ← Macrolide‑specific efflux protein MacA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,038,4770AG100.0% 158.0 / NA 58T144T (ACT→ACC) unknownMacrolide‑specific efflux protein MacA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (28/30);  total (28/30)

TTCCGGCTTAATGCGCATTTTGCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCAGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACATAAAGTTTGGTGACTTTCCCTGACAC  >  1/1038237‑1038719
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                  
ttCCGGCTTAATGCGCATTTTGCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAAtg                                                                                                                                                                                                                                          <  1:490533/251‑1 (MQ=255)
          aTGCGCATTTTGCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGa                                                                                                                                                                                                                                <  1:68747/251‑1 (MQ=255)
          aTGCGCATTTTGCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGa                                                                                                                                                                                                                                <  1:428709/251‑1 (MQ=255)
                     gCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAAtg                                                                                                                                                                                                                                          >  1:673990/1‑230 (MQ=255)
                        tAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACTGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGcc                                                                                                                                                                                                                  <  1:436784/251‑1 (MQ=255)
                                   cTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGt                                                                                                                                                                                                                             >  1:349023/1‑229 (MQ=255)
                                   cTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTg                                                                                                                                                                                                       >  1:752218/1‑251 (MQ=255)
                                        aTGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACaa                                                                                                                                                                                                  >  1:586632/1‑251 (MQ=255)
                                            tAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGcc                                                                                                                                                                                                                  <  1:587142/231‑1 (MQ=255)
                                                          tGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAg                                                                                                                                                                                <  1:746737/251‑1 (MQ=255)
                                                          tGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAg                                                                                                                                                                                <  1:634626/251‑1 (MQ=255)
                                                                   tttACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTTTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACAt                                                                                                                                                                        <  1:36200/250‑1 (MQ=255)
                                                                   tttACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACAt                                                                                                                                                                        <  1:580067/250‑1 (MQ=255)
                                                                    ttACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGCTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCg                                                                                                                                                                      <  1:431944/251‑1 (MQ=255)
                                                                       ccGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCg                                                                                                                                                                                               >  1:857498/1‑223 (MQ=255)
                                                                        cGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAg                                                                                                                                                                  <  1:526344/251‑1 (MQ=255)
                                                                          tttGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCg                                                                                                                                                                <  1:785386/251‑1 (MQ=255)
                                                                                 ttCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTg                                                                                                                                                          >  1:88113/1‑250 (MQ=255)
                                                                                 ttCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTg                                                                                                                                                          >  1:493678/1‑250 (MQ=255)
                                                                                  tCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCg                                                                                                                                                        >  1:151948/1‑251 (MQ=255)
                                                                                            gtgtGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCg                                                                                                                                                        >  1:602518/1‑241 (MQ=255)
                                                                                             tgtgGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAGGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAAtt                                                                                                                                             <  1:814256/251‑1 (MQ=255)
                                                                                              gtgGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTg                                                                                                                                            >  1:572268/1‑251 (MQ=255)
                                                                                               tgGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTgg                                                                                                                                           <  1:821602/251‑1 (MQ=255)
                                                                                                ggAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGcc                                                                                                                                                                                                                  >  1:760447/1‑179 (MQ=255)
                                                                                                ggAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTggg                                                                                                                                          >  1:626712/1‑251 (MQ=255)
                                                                                                  aaaTGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATCGGGc                                                                                                                                         <  1:485668/250‑1 (MQ=255)
                                                                                                               gTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTGCCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAAtg                                                                                                                                                                                                                                          <  1:578730/140‑1 (MQ=255)
                                                                                                                           ggTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCcac                                                                                                                                                                          <  1:793080/192‑1 (MQ=255)
                                                                                                                           ggTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTg                                                                                                                >  1:499212/1‑250 (MQ=255)
                                                                                                                                ttttGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGgtg                                                                                                          >  1:602220/1‑251 (MQ=255)
                                                                                                                                    ggTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTa                                                                                                      >  1:68558/1‑251 (MQ=255)
                                                                                                                                      tgtAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAAc                                                                                                    <  1:802090/251‑1 (MQ=255)
                                                                                                                                          gCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTAt                                                                                                >  1:157074/1‑251 (MQ=255)
                                                                                                                                               cGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCgg                                                                                                                                                               <  1:635844/183‑1 (MQ=255)
                                                                                                                                               cGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAAtt                                                                                           <  1:418673/251‑1 (MQ=255)
                                                                                                                                               cGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAAtt                                                                                           >  1:644985/1‑251 (MQ=255)
                                                                                                                                                                 tCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGGTAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGaatcaatc                                                                         <  1:195724/251‑1 (MQ=255)
                                                                                                                                                                 tCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGaatcaatc                                                                         <  1:860113/251‑1 (MQ=255)
                                                                                                                                                                    cTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGt                                                                                                                                                                                          <  1:844995/135‑1 (MQ=255)
                                                                                                                                                                    cTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAAc                                                                                                    >  1:747968/1‑221 (MQ=255)
                                                                                                                                                                    cTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAAtt                                                                                           >  1:441717/1‑230 (MQ=255)
                                                                                                                                                                    cTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCg                                                                      >  1:424136/1‑251 (MQ=255)
                                                                                                                                                                                   gTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTggg                                                                                       >  1:416614/1‑219 (MQ=255)
                                                                                                                                                                                   gTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGggt                                                                                      <  1:13845/220‑1 (MQ=255)
                                                                                                                                                                                             ttCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGc                                                                                                                                                                             >  1:579960/1‑123 (MQ=255)
                                                                                                                                                                                             ttCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAAttt                                                                                          <  1:642808/206‑1 (MQ=255)
                                                                                                                                                                                               ccTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCAc                                               >  1:145824/1‑247 (MQ=255)
                                                                                                                                                                                                  gTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGt                                                                                                  <  1:510547/193‑1 (MQ=255)
                                                                                                                                                                                                         gTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGtt                                 >  1:379780/1‑251 (MQ=255)
                                                                                                                                                                                                            cATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGa                              >  1:893560/1‑251 (MQ=255)
                                                                                                                                                                                                                              attCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGc                                                                                                                                         <  1:263750/126‑1 (MQ=255)
                                                                                                                                                                                                                              attCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGggt                                                                                      <  1:670688/177‑1 (MQ=255)
                                                                                                                                                                                                                              attCAAGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGggt                                                                                      >  1:892737/1‑177 (MQ=255)
                                                                                                                                                                                                                                  aaGGTGGCTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACATAAAGTTTGGTGACTTTccc        <  1:529841/251‑1 (MQ=255)
                                                                                                                                                                                                                                         cTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACAt                           >  1:505366/1‑225 (MQ=255)
                                                                                                                                                                                                                                         cTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACATAAAGTTTGGTGACTTTCCCTGacac  >  1:350624/1‑250 (MQ=255)
                                                                                                                                                                                                                                         cTTTAGCGGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACATAAAGTTTGGTGACTTTCCCTGaca   <  1:660796/249‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                  
TTCCGGCTTAATGCGCATTTTGCTTAAATCCGCCACTTTAATGATAGTCGGCGTGGTCTGATTGGAGTTTACCGTTTGCCCTTCGGATACCGGTGTGGAAATGACCGTGCCGTCAATCGGGGAGGTGATTTTGGTGTAGCCCACGTTGGTTTCGGCGGTGTTCACTTCAATTTCCGCCTGTTTAATATTTTCCTGTACCACGTCCATTTCCGCTTTGGCATTATTCAAGGTGGCTTTAGCAGTATTTAATGTGTCCAATGAAGTGGCTTTTTGCCCGTATAATTTGGACAAGCGATTGTAATTGGAAAGTGCCACATCGTAAGCGGTTTTGCGTGCAACTAATTGGGCTTGATAACTCGCCAAGGCGGCTTTGCGGGTGTTTAACGTATTAATTTGGGTGGTGGAATCAATCTCGGCAATTAAATCGCCTTTTTTCACCTGTTGTCCCAGTTTGACATAAAGTTTGGTGACTTTCCCTGACAC  >  1/1038237‑1038719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑