| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,027,246 | T→C | R30G (AGG→GGG) | unknown ← | Lysine exporter LysO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,027,246 | 0 | T | C | 98.7% | 220.8 / ‑3.3 | 79 | coding (88/909 nt) | unknown | Lysine exporter LysO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (38/40); minor base . (0/1); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.48e-01 | |||||||||||
TAATTTCAAGGAATCCGGCAAAATATGCCAGCGGGAAGGCATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCTCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGT > 1/1027001‑1027480 | tAATTTCAAGGAATCCGGCAAAATATGCCAGCGGGAAGGCATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATg < 1:2432/251‑1 (MQ=255) aTTTCAAGGAATCCGGCAAAATATGCCAGCGGGAAGGCATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATg < 1:290487/249‑1 (MQ=255) aTTTCAAGGAATCCGGCAAAATATGCCAGCGGGAAGGCATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCg > 1:466370/1‑251 (MQ=255) cATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAg > 1:179160/1‑250 (MQ=255) cATTTTTCCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGc < 1:133452/251‑1 (MQ=255) gCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACAt > 1:703796/1‑251 (MQ=255) gtgtTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGc < 1:420550/198‑1 (MQ=255) gtgtTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCa > 1:395246/1‑251 (MQ=255) gtgtTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCa > 1:358526/1‑251 (MQ=255) gtgtTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCa > 1:569370/1‑251 (MQ=255) gttagCGGGTAAAGTTTGTCGTAAACCACCAAGCCGATAAAATTAAACCCTTGCATCAATAAAATAAAGGTTAAGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAaataa < 1:347199/246‑1 (MQ=255) aaacaggttGAAGTTTGTCTTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAaataa < 1:420094/241‑1 (MQ=255) tGCGGGTGAAGTTTGTCGAAAACAAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAg < 1:281519/251‑1 (MQ=255) gggTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCaa > 1:28617/1‑251 (MQ=255) ggTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCaaa > 1:626300/1‑251 (MQ=255) aGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAGTCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCtt > 1:280586/1‑250 (MQ=255) aGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAAc < 1:402978/206‑1 (MQ=255) aGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAaataa > 1:143218/1‑238 (MQ=255) tgtggTAAACAAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTac < 1:438744/247‑1 (MQ=255) tGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTac < 1:323548/251‑1 (MQ=255) tCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTacac < 1:390544/251‑1 (MQ=255) gCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCtt > 1:412198/1‑251 (MQ=255) aaaTTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTa > 1:197642/1‑251 (MQ=255) aaaTTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTa > 1:402001/1‑251 (MQ=255) aaTTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGc > 1:754783/1‑186 (MQ=255) aaTTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTacac > 1:869479/1‑229 (MQ=255) aaTTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTAt > 1:634310/1‑251 (MQ=255) aaaCCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGtt < 1:297266/251‑1 (MQ=255) cccTTGCGTCAATACAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAg > 1:567972/1‑251 (MQ=255) cccTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACaa < 1:520663/185‑1 (MQ=255) cccTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTaaaa > 1:245940/1‑200 (MQ=255) cccTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTacac < 1:62629/222‑1 (MQ=255) cccTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAg < 1:709405/251‑1 (MQ=255) cccTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAg > 1:23028/1‑251 (MQ=255) cGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGc < 1:510851/173‑1 (MQ=255) tCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGt < 1:112614/251‑1 (MQ=255) ataaaataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTac > 1:139368/1‑209 (MQ=255) aaataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAaataa < 1:636267/189‑1 (MQ=255) aaataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGATCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCa > 1:463978/1‑251 (MQ=255) aaataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTacac < 1:174742/208‑1 (MQ=255) aaataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCC‑CAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:436794/251‑1 (MQ=255) aataaaGGTTAGGGCATAAACGCCGATTTGCGTTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:492872/251‑1 (MQ=255) aataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:617342/251‑1 (MQ=255) aataaaGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:564132/251‑1 (MQ=255) ggTTAGGGCATAAACGCCGATTTGTGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:76527/245‑1 (MQ=255) ttAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAGTAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGt < 1:75977/251‑1 (MQ=255) gggCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATg < 1:75302/114‑1 (MQ=255) gggCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATAc > 1:457275/1‑207 (MQ=255) cATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCAccc < 1:682452/250‑1 (MQ=255) cATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCAccc > 1:84103/1‑250 (MQ=255) ttgttgTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTg > 1:120521/1‑195 (MQ=255) ttgttgTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATcg > 1:167715/1‑238 (MQ=255) aaaTCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATg > 1:36502/1‑144 (MQ=255) gaTCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTa > 1:724324/2‑251 (MQ=255) aTCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGaaaa > 1:635559/1‑167 (MQ=255) tCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTagag < 1:83921/176‑1 (MQ=255) cATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGt < 1:640054/251‑1 (MQ=255) tCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAAt > 1:530073/1‑219 (MQ=255) ttGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATaa < 1:811930/249‑1 (MQ=255) tGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCCGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGc < 1:445027/251‑1 (MQ=255) tGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCCGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGc < 1:443141/251‑1 (MQ=255) cGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCAc > 1:113748/1‑250 (MQ=255) gagaAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGt > 1:793220/1‑251 (MQ=255) gCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAGGTATAGCAc > 1:448279/1‑179 (MQ=255) aTGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTAtt > 1:143995/1‑251 (MQ=255) gagaACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTacac < 1:218344/128‑1 (MQ=255) gaACAAGATCATGTAAAGCAGAACCATTGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGt < 1:383497/220‑1 (MQ=255) gaACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATaa < 1:516480/225‑1 (MQ=255) gaACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTATTGAttt > 1:453031/1‑251 (MQ=255) aGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAAcc < 1:830273/71‑1 (MQ=255) aGATCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTg < 1:864726/145‑1 (MQ=255) aTCATGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAAcc > 1:506068/1‑110 (MQ=255) aTGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCAccc < 1:854450/173‑1 (MQ=255) tGTAAAGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTac < 1:230949/113‑1 (MQ=255) aaGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAAcc < 1:573833/102‑1 (MQ=255) aaGCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCAc < 1:141408/155‑1 (MQ=255) gCAGAACCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGt > 1:866747/1‑203 (MQ=255) aCCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAACATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGt > 1:795465/1‑251 (MQ=255) aCCATGGTTAATCGCCCCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGt > 1:334250/1‑251 (MQ=255) | TAATTTCAAGGAATCCGGCAAAATATGCCAGCGGGAAGGCATTTTTTCCGCATTGTGTTTTAGGGGTTGCGGGTGAAGTTTGTCGTAAACCAACAAGCCGATAAAATTAAACCCTTGCGTCAATAAAATAAAGGTTAGGGCATAAACGCCGATTTGCGGTAATTGTTGTGCCAAATCATTCAGTTGACCGAGAGAAAAGCCCATGGAGAACAAGATCATGTAAAGCAGAACCATGGTTAATCGCCTCAATGCGTGCAAAATCGTCTGATTTTTCGTTTTAACCATGTAGCCGACAAACATCGGCACTAAAATAATGAGCAAACCTTCGTACACCGTGAAAATACCTTAGAGTTATTGTTAAGCGCGAAGTATAGCACTTTTCTGTCACCCCGCCTAATCGCGCGCCGATAAAGCGATTGTTGTATGTTATAATGCCACCCGTTTTTTCTTATTGATTTTCTCCATGACGTTTCAAATTGT > 1/1027001‑1027480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |