Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 991,626 C→T intergenic (‑259/+602) unknown ← / ← unknown hypothetical protein/Thiol:disulfide oxidoreductase associated with MetSO reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1991,6260CT100.0% 162.3 / NA 62intergenic (‑259/+602)unknown/unknownhypothetical protein/Thiol:disulfide oxidoreductase associated with MetSO reductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (30/32);  total (30/32)

TCGTCATTGATAAAACGCGGAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACCATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGCATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGCAAGGTTGGTTTATTTACTTAAGCCGATTTTGCAAAATATTAACTGT  >  1/991381‑991860
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
tCGTCATTGATAAAACGCGGAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATg                                                                                                                                                                                                                                       <  1:866930/251‑1 (MQ=255)
   tCATTGATAAAACGCGGAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTAc                                                                                                                                                                                                                                    <  1:789561/251‑1 (MQ=255)
      ttGATAAAACGCGGAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAAt                                                                                                                                                                                                                                 <  1:182256/251‑1 (MQ=255)
                   gAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAAt                                                                                                                                                                                                                    >  1:396246/1‑251 (MQ=255)
                   gAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAAt                                                                                                                                                                                                                    >  1:22996/1‑251 (MQ=255)
                     aGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGa                                                                                                                                                                                                                  >  1:405484/1‑251 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTa                                                                                                                                                                                                                               <  1:86915/210‑1 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTa                                                                                                                                                                                                                               >  1:237721/1‑210 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAgg                                                                                                                                                                                                          <  1:826500/231‑1 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:767210/1‑248 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:669829/1‑248 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:307915/1‑248 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:739563/1‑248 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:269083/1‑248 (MQ=255)
                                                 tctcTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCa                                                                                                                                                                                         >  1:206185/1‑248 (MQ=255)
                                                  ctctATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCAc                                                                                                                                                                                        <  1:360230/248‑1 (MQ=255)
                                                           aTCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCactataactata                                                                                                                                                                                                                                         >  1:828876/1‑190 (MQ=255)
                                                             ccAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTAc                                                                                                                                                                                                                              >  1:290699/1‑199 (MQ=255)
                                                               aaaTAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTaaaa                                                                                                                                                                        >  1:720285/1‑251 (MQ=255)
                                                                   aaCCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATGAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTAc                                                                                                                                                                    <  1:454209/251‑1 (MQ=255)
                                                                    aCCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTAc                                                                                                                                                                                                                                    >  1:519254/1‑186 (MQ=255)
                                                                                      aTCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGTCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 <  1:454550/251‑1 (MQ=255)
                                                                                      aTCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 <  1:724958/251‑1 (MQ=255)
                                                                                           aTTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGAt                                                                                                                                             <  1:202969/250‑1 (MQ=255)
                                                                                             tttCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGc                                                                                                                                          <  1:790443/251‑1 (MQ=255)
                                                                                              ttCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACaa                                                                                                                                                                                                                                  >  1:376198/1‑162 (MQ=255)
                                                                                              ttCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCAc                                                                                                                                                                                        <  1:816579/204‑1 (MQ=255)
                                                                                              ttCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCAc                                                                                                                                                                                        <  1:472517/204‑1 (MQ=255)
                                                                                              ttCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGgtaagt                                                                                                                                                                                >  1:465826/1‑212 (MQ=255)
                                                                                                                  tCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGt                                                                                                                                                                                                                                      >  1:49047/1‑138 (MQ=255)
                                                                                                                  tCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTg                                                                                                                                                                                                                            >  1:546871/1‑148 (MQ=255)
                                                                                                                        tGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 <  1:274633/217‑1 (MQ=255)
                                                                                                                            aaaGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCAc                                                                                                                                                                                        >  1:310705/1‑174 (MQ=255)
                                                                                                                               gATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 >  1:645719/1‑210 (MQ=255)
                                                                                                                                aTCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAgagg                                                                                                        <  1:833868/250‑1 (MQ=255)
                                                                                                                                        gtgtTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATc                                                                                                                                            <  1:63134/206‑1 (MQ=255)
                                                                                                                                          gtTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAg                                                                                                                                                                                             >  1:295973/1‑155 (MQ=255)
                                                                                                                                          gtTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTag                                                                                                           >  1:392074/1‑237 (MQ=255)
                                                                                                                                              cGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAAc                                                                                         <  1:137036/251‑1 (MQ=255)
                                                                                                                                                                   ataGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 >  1:729499/1‑174 (MQ=255)
                                                                                                                                                                             ggCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAAc                                                                                         <  1:593446/220‑1 (MQ=255)
                                                                                                                                                                                 aaGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTAc                                                                                                                                                                    <  1:481094/141‑1 (MQ=255)
                                                                                                                                                                                            aTCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAggt                                           <  1:493623/251‑1 (MQ=255)
                                                                                                                                                                                            aTCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAggt                                           <  1:644796/251‑1 (MQ=255)
                                                                                                                                                                                              ccTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTGTATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAggt                                           >  1:207292/1‑249 (MQ=255)
                                                                                                                                                                                              ccTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTAc                                                                                                                                                                                                                              >  1:16444/1‑70 (MQ=255)
                                                                                                                                                                                              ccTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGtatttatt                                                                                              >  1:754214/1‑198 (MQ=255)
                                                                                                                                                                                              ccTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAAc                                                                                         >  1:145881/1‑203 (MQ=255)
                                                                                                                                                                                                      cTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGgtaagtaa                                                                                                                                                                              <  1:440468/110‑1 (MQ=255)
                                                                                                                                                                                                      cTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAGGTTGGtttattt                                 <  1:202339/251‑1 (MQ=255)
                                                                                                                                                                                                        aTCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGtatttatt                                                                                              >  1:42690/1‑188 (MQ=255)
                                                                                                                                                                                                                gTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAAc                                                                                                                                                 <  1:175494/129‑1 (MQ=255)
                                                                                                                                                                                                                        tCTTTGGATGGTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAgaga                                                                                                                                                          <  1:47777/112‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTTTCAAGGCACTATAACTATATGTACAATTACTGTCa                                                                                                                                                                                                                         <  1:80107/39‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTTTCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAggt                                           >  1:670643/1‑213 (MQ=255)
                                                                                                                                                                                                                                   ttttCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAGGTTGGTTTATTTACTTAAGCCGATTTTGCAAAATATTAAc     <  1:462281/250‑1 (MQ=255)
                                                                                                                                                                                                                                   ttttCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAGGTTGGTTTATTTACTTAAGCCGATTTTGCAAAATATTAACt    <  1:727808/251‑1 (MQ=255)
                                                                                                                                                                                                                                    tttCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATAc                                                                                                                                                               <  1:693341/95‑1 (MQ=255)
                                                                                                                                                                                                                                    tttCAAGGCACTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAgaggag                                                                                                      <  1:322195/152‑1 (MQ=255)
                                                                                                                                                                                                                                              cTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAAc                                                                                         <  1:219575/155‑1 (MQ=255)
                                                                                                                                                                                                                                              cTATAACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAAc                                                                          >  1:443755/1‑170 (MQ=255)
                                                                                                                                                                                                                                                ataACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAAc                                                                                         >  1:26492/1‑153 (MQ=255)
                                                                                                                                                                                                                                                 taACTATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGTATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGTAAGGTTGGTTTATTTACTTAAGCCGATTTTGCAAAATATTAACTGt  <  1:834970/239‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
TCGTCATTGATAAAACGCGGAAGTAACGTGTGGAATGATTCATTGGTAATCTCTATACCATCCAAATAACCATGGGCATTTGGATAATCTGATTTTCTAATACAATTCCAAAAATCTTTATGATAAAGATCACTAAGTGTTGCGACTTGCTGACCGCTAAATAATAGCCAACTGGCTAAGCAGTTTAAATCCTTATAACTATCAAATAGTTCGATTTCTTTGGATGGTTTTCAAGGCACTATAACCATATGTACAATTACTGTCAAAAATGATTTTAAGGTTATCGGCACAAGTGCACTGGTAAGTAAGTAAAACTACAATACAGAGATCTGTAAACAGATCGCTTATCAAAATTTGATAAATTGTGATAGCTAGAGGAGCATTTATTAAAACAGCGTATTTATGAACAATGTGACTAAAAAGTTATTCTACGCAAGGTTGGTTTATTTACTTAAGCCGATTTTGCAAAATATTAACTGT  >  1/991381‑991860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑