| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 982,618 | T→C | G242G (GGT→GGC) | unknown → | LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 982,618 | 0 | T | C | 100.0% | 233.5 / NA | 81 | G242G (GGT→GGC) | unknown | LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/38); total (43/38) | |||||||||||
AATTAGCCAACCGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGTATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATTAAATAAACGTTATAAAAAATAGCA > 1/982377‑982863 | aaTTAGCCAACCGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAGGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTc < 1:389573/251‑1 (MQ=255) ccGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGa < 1:570549/251‑1 (MQ=255) ccGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGa < 1:608878/251‑1 (MQ=255) ccGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGa < 1:874112/251‑1 (MQ=255) gCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGAtt > 1:601125/1‑251 (MQ=255) tAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCg > 1:689081/1‑250 (MQ=255) gCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACgg > 1:119717/1‑250 (MQ=255) ccGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGc < 1:725496/250‑1 (MQ=255) gAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTaaa > 1:574784/1‑249 (MQ=255) gAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc < 1:431157/250‑1 (MQ=255) gAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc < 1:807526/250‑1 (MQ=255) cgcgAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACtg < 1:462672/249‑1 (MQ=255) cgAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACtgatga > 1:294404/1‑251 (MQ=255) gAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGACAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACAtataacgtgc > 1:803298/1‑239 (MQ=255) ttCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACtt > 1:70328/1‑251 (MQ=255) tccgtctcgtgggctCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAAc < 1:648556/235‑1 (MQ=255) ccGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc > 1:572510/1‑237 (MQ=255) cAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCa > 1:856817/1‑251 (MQ=255) atgCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGaa > 1:15974/1‑251 (MQ=255) atgCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGaa > 1:700225/1‑251 (MQ=255) atgCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGaa > 1:118913/1‑251 (MQ=255) aTGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc < 1:264423/205‑1 (MQ=255) aTGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGaaa > 1:321715/1‑241 (MQ=255) aTGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTgg > 1:372252/1‑250 (MQ=255) tGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCg < 1:306461/251‑1 (MQ=255) tGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCg < 1:574228/251‑1 (MQ=255) gTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc < 1:165377/203‑1 (MQ=255) gAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAattatt > 1:55028/1‑251 (MQ=255) gCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTg < 1:740664/249‑1 (MQ=255) cTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCg < 1:3665/222‑1 (MQ=255) gTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGccgccg > 1:882778/1‑251 (MQ=255) gTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAat > 1:787934/1‑195 (MQ=255) gTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCaa > 1:253372/1‑251 (MQ=255) gTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATaa > 1:527537/1‑251 (MQ=255) ttGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATaaa > 1:869618/1‑251 (MQ=255) cggcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAAcc < 1:509929/250‑1 (MQ=255) gcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc > 1:418919/1‑129 (MQ=255) gcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCcg < 1:32924/146‑1 (MQ=255) gcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGt > 1:9379/1‑251 (MQ=255) gcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGt > 1:39973/1‑251 (MQ=255) gcgTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGCCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGt > 1:882414/1‑251 (MQ=255) ggCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATaa > 1:670109/1‑251 (MQ=255) tgTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCCGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGCAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGt > 1:10990/2‑251 (MQ=255) ggTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAAccc < 1:205258/231‑1 (MQ=255) ggTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGt > 1:400908/1‑251 (MQ=255) gACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTc > 1:817685/1‑229 (MQ=255) aCCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGc < 1:176758/209‑1 (MQ=255) aCCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTaa > 1:480556/1‑251 (MQ=255) ccTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAAc < 1:279212/217‑1 (MQ=255) ccTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTaaa < 1:766248/251‑1 (MQ=255) ttAATGGGAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGc < 1:402679/251‑1 (MQ=255) ttAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGc < 1:472002/251‑1 (MQ=255) ttAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGc < 1:522687/251‑1 (MQ=255) tGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTa > 1:532862/1‑251 (MQ=255) aaGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTaaaa < 1:231605/251‑1 (MQ=255) ggCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCg < 1:17577/134‑1 (MQ=255) gcgcAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGtt > 1:755520/1‑251 (MQ=255) aaCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAATTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTc < 1:428778/251‑1 (MQ=255) aaCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTc < 1:687280/251‑1 (MQ=255) aaCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTc < 1:823801/251‑1 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGAtt > 1:640587/1‑56 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAAc > 1:874356/1‑81 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAAc > 1:343707/1‑150 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTggg < 1:758322/187‑1 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTg > 1:507966/1‑185 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAAcc < 1:58707/200‑1 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAAc > 1:514429/1‑199 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGc > 1:668707/1‑235 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCa > 1:740518/1‑251 (MQ=255) aCCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCa > 1:825192/1‑251 (MQ=255) cGTGAAGTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTAttt > 1:210555/1‑140 (MQ=255) gTGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAAt > 1:317420/1‑208 (MQ=255) tGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATtaaat < 1:791517/251‑1 (MQ=255) tGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATtaaat < 1:477252/251‑1 (MQ=255) tGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATtaaat < 1:388403/251‑1 (MQ=255) tGCGTCGTTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATtaaat < 1:148778/251‑1 (MQ=255) tcgtTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGc < 1:622999/222‑1 (MQ=255) gtTTATGGGAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTc < 1:186521/235‑1 (MQ=255) ggAATCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATTAAATAAACGTTATaaa < 1:187682/250‑1 (MQ=255) aaTCGCAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAAc > 1:52438/1‑186 (MQ=255) cAAGGCATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATTAAATAAACGTTATAAAAAATAGCa > 1:836805/1‑251 (MQ=255) | AATTAGCCAACCGCTTAATGCACCCGAGCCGTGAAGTGGAGCGCGAATATTCCGTGCGTGTGTTCGGGCAAGTGGATGATGCCATGTTGAACCGTTTGAAAAAAGGCGTGCAACTGGAAGACGGTCCGGCAAATTTCAAAGAAATTAAAGTCGTTGGCGGCGTAGGCATGAACCAATGGTTTGACGTGACCTTAATGGAAGGGCGCAACCGTGAAGTGCGTCGTTTATGGGAATCGCAAGGTATTCAGGTCAGTCGTTTGATTCGCATTCGTTACGGCAACATTAAACTGATGAAAACTTTGCCGCGCGGTGGCTGGCAGGAAATGGAACTGGCGGATGTGAATTATTTGCGTGAACTTGTCGGTTTGCCGCCGGAAACGGAAACCAAATTGGGTGCCAATAAAACCCGTCATAAACCGAAATTCAGTCAAATCCGTAAAGCAGTAAAACGTTACTCAGAATTAAATAAACGTTATAAAAAATAGCA > 1/982377‑982863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |