| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 981,796 | A→G | V194V (GTA→GTG) | unknown → | YciO protein, TsaC/YrdC paralog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 981,796 | 0 | A | G | 100.0% | 94.9 / NA | 37 | V194V (GTA→GTG) | unknown | YciO protein, TsaC/YrdC paralog |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (19/18); total (19/18) | |||||||||||
TGACGTCCAAGCGCAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGGTCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTAATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAATTACAAAAAGTGTTAGCCCGTG > 1/981549‑982040 | tGACGTCCAAGCGCAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATc < 1:270367/251‑1 (MQ=255) cGTCCAAGCGCAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTATTTTGGGA‑AAGAACCGACAACGGTGGGGGGTTTAACCGGAGGCCAGCCGGTGATCttt > 1:138348/1‑250 (MQ=255) ccAAGCGCAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGt < 1:217570/251‑1 (MQ=255) cAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGc < 1:730911/250‑1 (MQ=255) gCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGGGGGGGGTTTTACCCGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGGGCgggt > 1:649777/1‑249 (MQ=255) gCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAAACGACAACGGGGGGGGATTTAAACGGAGACACGCCGGGGATCTTGCGTGAAGGCAGCGGCGCgggt > 1:158997/1‑249 (MQ=255) ggATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGc < 1:449/226‑1 (MQ=255) gATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCatttattt < 1:795371/250‑1 (MQ=255) aaTTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTtagattagat < 1:241046/251‑1 (MQ=255) ggATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTTGGACAAGAACCGACAACGGGGGGGGATTTAACCGGAGACACGCCCGTGATCTTGCGGGAAGGGAACGGCGCGGGTACGCCCTTTTTTTTGATTATATACTTATTTa > 1:885454/1‑251 (MQ=255) cTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGGCAAGAAACGACAACAGTGGTGGATTTTACCGGAGACACCCCCGCGATCTTTCGTGAAGGc > 1:153636/1‑201 (MQ=255) gCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGGCAAGAACCGACAACGGTGGGGGGTTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGGTACGCCCTTTTTTTAGATTTGATACTTAGTTAAATTAACACAGa > 1:46085/1‑250 (MQ=255) ccGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATAc < 1:328669/219‑1 (MQ=255) gATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGGGGTGGATTTAACCGGAGACACGCCGGGGATCTTGCGTGAAGGCAGCGGCGCGGGTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGa > 1:547100/1‑245 (MQ=255) aTTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTTGGACAAAAACCGACAACGGGGGGGGATTTAAACGGAGACACGCCGGGGATCTTCCGCGAAGGCAGCGGCGCGGGTACGCCCTTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAACGa > 1:490629/1‑250 (MQ=255) aTTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTg < 1:824420/175‑1 (MQ=255) aTTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGGGGATTTAAACGGAGACACGCCGGGGATCTTGCGTGAAGGCAGCGGCGCGGGTACGCCCTTTATTTAGATTAGATACTTAGTTAAATTAAAACAAACGCTTGGGAAAGCGa > 1:520090/1‑250 (MQ=255) cTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGAt < 1:316963/251‑1 (MQ=255) gCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTTGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGGTACGCCCTTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGAttt > 1:96602/1‑251 (MQ=255) aaCATTTGACGCAATCGGATCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACt < 1:747495/251‑1 (MQ=255) atCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTTGGACAAGAAACCACAACGGGGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGGTACGCCATTTATttagatt > 1:347244/2‑158 (MQ=255) atCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACCAGAACCGACAACGGTGGGGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGGAGGCAGCGGCGCGGTTTCGCCATTTTTTTAGGTTAGATATTTAGTTTAATTTACACACACGCCTGGGAAAGCGGCACCAGGATTTATGAAACCCACCACAAAACGCACCCAAAATCCACCGcccctt > 1:165009/2‑246 (MQ=255) atCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGa < 1:543909/212‑1 (MQ=255) gAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTtcgt < 1:605720/250‑1 (MQ=255) gaTCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGGCAAGAACCGACAACGGGGGGGGGTTTAACCGGAGACACGCCGGGGATCTTGCGGGAAGGCAGCGGCGCGGGTACGCCATTTATTTAGATTAGATACTTAGTTTAATTAACACAGACGCTTGGGGAAGCGACACGAGGATTTATGAAACCCACAACAAAAAGCACTCAAAATCGACCGCACTTTTCGTCGAACa > 1:257469/1‑251 (MQ=255) gATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAAtt < 1:740719/137‑1 (MQ=255) attCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAAccc < 1:241705/171‑1 (MQ=255) attCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGAcc < 1:703311/197‑1 (MQ=255) ttCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATcagc < 1:316439/251‑1 (MQ=255) tttGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGCTACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCaaaa > 1:65852/1‑251 (MQ=255) tGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAAcc < 1:883373/251‑1 (MQ=255) cGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATg < 1:644144/192‑1 (MQ=255) cGGTGGTGGATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGaa > 1:428177/1‑251 (MQ=255) ggtggATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAAt > 1:319707/1‑251 (MQ=255) ggtggATTTAACCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAAt > 1:854449/1‑251 (MQ=255) aaCCGGAGACACGCCGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAATTACAAAAAg > 1:76054/1‑251 (MQ=255) ccGGTGATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAATTACAAAAAGTGTTAGCCCGTg > 1:546888/1‑250 (MQ=255) | TGACGTCCAAGCGCAAAACCATCGGCATTCGCGTGCCGGATAACCAAATTGCGTTGGATTTACTAAAAGCCCTTGGTGAACCGATTTTATCCTGCTCGTTGATGCTACCGAATGAAGAACATTTGACGCAATCGGGTCCGGAAGAGATCCGTGATCGTTTGGAACATCAGGTGGATTTAATTATTCACGGCGGTTA‑TTTGGGACAAGAACCGACAACGGTGGTGGATTTAACCGGAGACACGCCGGTAATCTTGCGTGAAGGCAGCGGCGCGGTTACGCCATTTATTTAGATTAGATACTTAGTTAAATTAACACAGACGCTTGGGAAAGCGACACGAGGATTTATGAAACCCACAACAAAACGCACTCAAAATCGACCGCACTTTTCGTCGAACAAAGATAAAAATGCGACGGCGAAGCCGCGTCCGATCAGCAGCGCAAGCAAAACCTCCGCGGCAGAAGGCGAAAAATTACAAAAAGTGTTAGCCCGTG > 1/981549‑982040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |