| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 951,229 | T→C | intergenic (‑22/+25) | unknown ← / ← unknown | Lipid A export permease/ATP‑binding protein MsbA/DNA internalization‑related competence protein ComEC/Rec2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 951,229 | 0 | T | C | 100.0% | 188.0 / NA | 68 | intergenic (‑22/+25) | unknown/unknown | Lipid A export permease/ATP‑binding protein MsbA/DNA internalization‑related competence protein ComEC/Rec2 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/32); total (36/32) | |||||||||||
CCGACATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACGATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTTAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAGCGTCCGCTGGAAATCAGCGCAATGTCCGGT > 1/951006‑951473 | ccGACATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTa < 1:289811/251‑1 (MQ=255) gACATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAtt > 1:146937/1‑251 (MQ=255) aCATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAttt < 1:497769/251‑1 (MQ=255) cATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCaaaaaa < 1:766175/226‑1 (MQ=255) cATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAttt > 1:844379/1‑250 (MQ=255) gTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTa > 1:771174/1‑242 (MQ=255) gCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAttt > 1:8571/1‑225 (MQ=255) tGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTa > 1:873658/1‑218 (MQ=255) tGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCa < 1:545895/251‑1 (MQ=255) tGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCa > 1:405028/1‑251 (MQ=255) cAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAgcg > 1:432359/1‑251 (MQ=255) cAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAgcg > 1:189035/1‑251 (MQ=255) tAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAAtt < 1:96817/251‑1 (MQ=255) aaGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAttt > 1:124659/1‑189 (MQ=255) gCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCa > 1:519313/1‑251 (MQ=255) ccGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTc < 1:424338/249‑1 (MQ=255) gAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGAt < 1:536523/200‑1 (MQ=255) aaTCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGTGGTCTGAATTTTGATCTCTTCATTGt < 1:555009/250‑1 (MQ=255) cGGTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAAttt > 1:377782/1‑232 (MQ=255) gTTAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAAc < 1:339100/250‑1 (MQ=255) ttAACGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACaa < 1:649337/251‑1 (MQ=255) aCGCGTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAg < 1:157186/251‑1 (MQ=255) cgcgTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGGCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGAt > 1:16209/1‑229 (MQ=255) cgTTTAATACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAAtt > 1:275325/1‑222 (MQ=255) aTACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGt > 1:242593/1‑232 (MQ=255) tACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAt < 1:749814/152‑1 (MQ=255) tACTAACGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTg > 1:35965/1‑250 (MQ=255) aCGCAACACCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGt > 1:688925/1‑226 (MQ=255) acacCGGAAACAATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCcaatcaa < 1:439856/162‑1 (MQ=255) caaTCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCtt < 1:857440/127‑1 (MQ=255) aaTCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa > 1:326542/2‑251 (MQ=255) aaTCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa < 1:199042/250‑1 (MQ=255) aaCCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTtg > 1:3144/1‑251 (MQ=255) cTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGa < 1:11810/251‑1 (MQ=255) gCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATAc > 1:512138/1‑151 (MQ=255) gCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa > 1:164866/1‑241 (MQ=255) gCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa < 1:752136/241‑1 (MQ=255) ggCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTAttt < 1:718176/113‑1 (MQ=255) ggCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAAc < 1:753262/195‑1 (MQ=255) ggCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCttgttgttg > 1:654699/1‑251 (MQ=255) ggCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCACAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaaa < 1:447379/232‑1 (MQ=255) atcatcGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAgg > 1:492275/1‑250 (MQ=255) gCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGAc < 1:262458/190‑1 (MQ=255) gCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa < 1:547070/219‑1 (MQ=255) aCGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGt > 1:140799/1‑249 (MQ=255) cGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTa > 1:524748/1‑90 (MQ=255) cGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCtt > 1:24009/1‑251 (MQ=255) cGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCtt > 1:325929/1‑251 (MQ=255) gTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAAt > 1:569407/1‑212 (MQ=255) aaGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATgg < 1:514810/250‑1 (MQ=255) aGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaa > 1:886985/1‑204 (MQ=255) gtggAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAAt < 1:275560/195‑1 (MQ=255) gtggAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATg > 1:500846/1‑251 (MQ=255) gtggAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATg > 1:865834/1‑251 (MQ=255) ggTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGAc > 1:130352/1‑157 (MQ=255) ggTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGAtt < 1:337431/162‑1 (MQ=255) ggTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTtg < 1:323236/191‑1 (MQ=255) ggTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATcc > 1:440738/1‑197 (MQ=255) ggTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATc < 1:790717/196‑1 (MQ=255) gTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCttgtt > 1:119026/1‑201 (MQ=255) gTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAg > 1:70544/1‑251 (MQ=255) cTTGATCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAGCg < 1:227674/251‑1 (MQ=255) aTCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATgcgc < 1:872242/169‑1 (MQ=255) aTCTTGCATAATAAATTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGAATTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAGCGTCCg > 1:430642/1‑251 (MQ=255) aTTTTCTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATaaa > 1:847985/1‑166 (MQ=255) cTGTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGAtt < 1:148140/136‑1 (MQ=255) gTCTTAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAAc < 1:420856/122‑1 (MQ=255) ttAGGTCAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAGCGTCCGCTGGAAATCAGCGCAATGTCCGGt < 1:5032/251‑1 (MQ=255) | CCGACATTTGTTTTAAAAAAGAAGCGTCAGCTTTGCCAAAACCATCATCCAATAAGGGTTTCAGTAAGAAAATTAAGCCGGAATCGGTTAACGCGTTTAATACTAACGCAACACCGGAAACGATCAAACCTGCTTTATACGGGCTAATCATCGGCCATAAACGTTTGAAGGTTTGCATGGTGGAAAGGTCTTGATCTTGCATAATAAATTTTCTGTCTTAGGTTAAAAAATAATGGCGCATTGTACCTTTATTTCGTGCTCAAGCCAATCAATCTGCGATACCAAGGCGAAAATTCAGCGCGCGCGGTCTGAATTTTGATCTCTTCATTGTAGAACAATAGACTGATTTGCCCGCTATGCGCCGTATTATAAATTTGTGATCCTTGTTGTTGCAGGCGCGCCACCACGTCTTTATGGGGAAAATGCCATGGGTTCCAGCGTCCGCTGGAAATCAGCGCAATGTCCGGT > 1/951006‑951473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |