| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 947,437 | T→C | intergenic (‑86/+53) | unknown ← / ← unknown | Excinuclease ABC subunit C/3‑deoxy‑manno‑octulosonate cytidylyltransferase (EC 2.7.7.38) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 947,437 | 0 | T | C | 100.0% | 156.7 / NA | 55 | intergenic (‑86/+53) | unknown/unknown | Excinuclease ABC subunit C/3‑deoxy‑manno‑octulosonate cytidylyltransferase (EC 2.7.7.38) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (25/30); total (25/30) | |||||||||||
TTTTGCTGCTTAACTGCTTGCGAAAATAACTGGATAAGCGTTTTTTCAGATCTTTCGCCTTGCCCACATAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCTTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGTTTAATGAATC > 1/947195‑947680 | ttttGCTGCTTAACTGCTTGCGAAAATAACTGGATAAGCGTTTTTTCAGATCTTTCGCCTTGCCCACATAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGc < 1:725861/251‑1 (MQ=255) cTGCTTGCGAAAATAACTGGATAAGCGTTTTTTCAGATCTTTCGCCTTGCCCACATAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAg > 1:77960/1‑251 (MQ=255) tttttCAGATCTTTCGCCTTGCCCACATAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAt < 1:761476/251‑1 (MQ=255) caTAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAgaggag < 1:616507/194‑1 (MQ=255) aTCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCa > 1:82154/1‑251 (MQ=255) gTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACg > 1:397818/1‑207 (MQ=255) tCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGAt > 1:246795/1‑250 (MQ=255) tacGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCaa > 1:508757/1‑157 (MQ=255) cGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCggggg > 1:241721/1‑239 (MQ=255) ggTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCa > 1:552883/1‑250 (MQ=255) gTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCAc < 1:790469/250‑1 (MQ=255) gTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCAc < 1:325882/250‑1 (MQ=255) ttGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCttt < 1:780658/251‑1 (MQ=255) cGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCg < 1:70303/251‑1 (MQ=255) cGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCg < 1:795617/251‑1 (MQ=255) gAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGtt > 1:557264/1‑251 (MQ=255) aTTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTGTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAATACGTTAACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCg < 1:508729/251‑1 (MQ=255) tttGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTGTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACAt < 1:445845/251‑1 (MQ=255) gTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCaa < 1:628111/101‑1 (MQ=255) gTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCg > 1:353237/1‑228 (MQ=255) gTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGc > 1:211317/1‑250 (MQ=255) gTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGc > 1:71244/1‑250 (MQ=255) tCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATcc < 1:185959/200‑1 (MQ=255) gaTTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACtt > 1:837805/1‑168 (MQ=255) attaattaAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCa < 1:310052/251‑1 (MQ=255) gAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTa > 1:423501/1‑88 (MQ=255) gTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGtt > 1:565243/1‑120 (MQ=255) gTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAAt < 1:470443/245‑1 (MQ=255) gTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTc > 1:571198/1‑250 (MQ=255) cTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGt > 1:403971/1‑251 (MQ=255) ataGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAg < 1:172280/68‑1 (MQ=255) ataGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTg < 1:459180/242‑1 (MQ=255) aaTGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGAtg < 1:112576/251‑1 (MQ=255) tttGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGcc > 1:481304/1‑209 (MQ=255) gCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTcc < 1:145064/135‑1 (MQ=255) gCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACAt > 1:437532/1‑190 (MQ=255) gCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTg > 1:577484/1‑224 (MQ=255) cATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAgcgc < 1:115120/250‑1 (MQ=255) cATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAgcgc < 1:732416/250‑1 (MQ=255) aTTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAg > 1:272073/1‑251 (MQ=255) atatTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAAt > 1:601115/1‑217 (MQ=255) atatTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCg > 1:383620/1‑251 (MQ=255) cGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCAct > 1:734176/1‑161 (MQ=255) cGTCTAATCTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTcc > 1:153528/1‑218 (MQ=255) cTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTAc < 1:271891/251‑1 (MQ=255) cTTTAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTAc < 1:772377/251‑1 (MQ=255) ttAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGt < 1:557341/251‑1 (MQ=255) tAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTa < 1:43092/251‑1 (MQ=255) tAAAGAAAAAAGAAAATATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTa < 1:499114/251‑1 (MQ=255) aaaaaagaaaaTATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTg < 1:726052/249‑1 (MQ=255) aaaaagaaaaTATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGttt < 1:880611/251‑1 (MQ=255) gaaaaTATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAgcg < 1:101580/218‑1 (MQ=255) aaaaTATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGTTTAATg < 1:526975/249‑1 (MQ=255) aaaaTATCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGTTTAATGa < 1:615122/250‑1 (MQ=255) atatCCCTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGTTTAATGAATc > 1:544654/1‑250 (MQ=255) | TTTTGCTGCTTAACTGCTTGCGAAAATAACTGGATAAGCGTTTTTTCAGATCTTTCGCCTTGCCCACATAAATCACCGTGCTTTTATCGTCATACATACGATAAACGCCCGGTAAGTGCGGTACGTTGGCGAGGAATTTTTTGGCGTCGAAAGTCATAATGAGATTAATTAAATCGAGTTCTATAGTGAAATGATTTGAAGCATTATATTCGTCTAATCTTTAAAGAAAAAAGAAAATATCCTTCTTTAGCAAAGAGGAGTTAGGGGAGATTGGTCAATTTAGGTGCAAAAT‑‑‑‑‑‑ACGTTAACGGCATTTCTCCGATAAAATCGACCGCACTTTTTCCAGATCTTCGGGGGTATCCACACCCACGGCAGGCACTTCTTTAGCGAGTTCTACATGGATTTTTTCGCCATGCCAAAGCACGCGTAATTGTTCCAGTTTTTCGATGTGTTCCAGCGCAGTCGGCTGCCACTGTACGTATTGTTTAATGAATC > 1/947195‑947680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |