| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 933,712 | T→C | N187D (AAT→GAT) | unknown ← | Sugar fermentation stimulation protein SfsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 933,712 | 0 | T | C | 100.0% | 231.7 / NA | 81 | N187D (AAT→GAT) | unknown | Sugar fermentation stimulation protein SfsA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/40); total (41/40) | |||||||||||
ATCTAAATGATAATTGTTCTCAAGTATGAAGTCAAGCGCCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATTAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCACTTCGGG > 1/933467‑933949 | gtCTAAATGATAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCaaaa > 1:865825/2‑250 (MQ=255)gtCTAAATGATAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCaaaa > 1:744554/2‑250 (MQ=255) aaaTGATAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACcat > 1:605822/1‑250 (MQ=255) tGATAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATg > 1:200161/1‑251 (MQ=255) aTAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt < 1:116262/250‑1 (MQ=255) aTAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt < 1:482238/250‑1 (MQ=255) aTAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt < 1:519303/250‑1 (MQ=255) aTAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt < 1:619460/250‑1 (MQ=255) aTAATTGTTCTCAAATATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTGAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt < 1:453041/250‑1 (MQ=255) caaatATGAAGTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACagaag < 1:640332/247‑1 (MQ=255) gTCAAGCACCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCa > 1:405791/1‑248 (MQ=255) ccTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGt > 1:767912/1‑251 (MQ=255) ccTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGt > 1:52594/1‑251 (MQ=255) aataatTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGttttt > 1:186111/1‑251 (MQ=255) taatTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAAt > 1:760630/1‑226 (MQ=255) aataaatGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGAt > 1:660900/1‑250 (MQ=255) aataaatGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATc < 1:842468/251‑1 (MQ=255) aaCTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGtt > 1:4665/1‑251 (MQ=255) aCTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCcac < 1:247798/190‑1 (MQ=255) cTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGaaa > 1:814034/1‑188 (MQ=255) aCGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTc < 1:183968/251‑1 (MQ=255) cGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACcg < 1:795317/241‑1 (MQ=255) aCTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACcg < 1:800925/247‑1 (MQ=255) gTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGaaa > 1:832583/1‑251 (MQ=255) aaaTTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACAt > 1:625231/1‑251 (MQ=255) aTTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCa < 1:502023/191‑1 (MQ=255) gTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGt > 1:38421/1‑251 (MQ=255) gTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGt > 1:470548/1‑138 (MQ=255) gggAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGt > 1:284587/1‑251 (MQ=255) cTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCt < 1:866924/251‑1 (MQ=255) ttttttCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATa < 1:366763/250‑1 (MQ=255) tttttCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGTGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg < 1:290826/251‑1 (MQ=255) tttttCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg < 1:463215/251‑1 (MQ=255) gCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTc < 1:188498/192‑1 (MQ=255) cGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAGCCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGATGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTc < 1:465572/248‑1 (MQ=255) cGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACt < 1:843850/251‑1 (MQ=255) tAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTAc < 1:801818/251‑1 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCAc > 1:642716/1‑125 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTAc < 1:472721/225‑1 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg < 1:101643/230‑1 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCAc > 1:886500/1‑243 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACAt > 1:719726/1‑251 (MQ=255) aGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACAt > 1:507815/1‑251 (MQ=255) gCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGaaaa > 1:855086/1‑115 (MQ=255) gCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAAc > 1:323620/1‑198 (MQ=255) gCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg < 1:758436/229‑1 (MQ=255) gCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCAc > 1:803076/1‑242 (MQ=255) cATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACAt < 1:241778/249‑1 (MQ=255) gCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCaa < 1:257884/249‑1 (MQ=255) ccACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGc < 1:472505/251‑1 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAATGTGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCaa > 1:380436/1‑242 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATc < 1:430740/102‑1 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTc < 1:636610/176‑1 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATgg > 1:149525/1‑220 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGAt > 1:656520/1‑222 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTAc > 1:565632/1‑233 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGAt > 1:165013/1‑250 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGAt > 1:258966/1‑250 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATc < 1:611245/251‑1 (MQ=255) ccTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATc < 1:79479/251‑1 (MQ=255) cttcttTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCt < 1:281918/251‑1 (MQ=255) gcgcCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGAc < 1:147573/147‑1 (MQ=255) tgatgaAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGtttttt < 1:579061/182‑1 (MQ=255) gatgaAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGaa > 1:606896/1‑165 (MQ=255) aaTTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAAt < 1:587018/251‑1 (MQ=255) cGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGa > 1:855745/1‑251 (MQ=255) gTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATa > 1:140189/1‑183 (MQ=255) atatCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGa > 1:426724/1‑247 (MQ=255) tatCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGtt > 1:29765/1‑251 (MQ=255) tatCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGtt > 1:346847/1‑251 (MQ=255) cTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTtctc < 1:278537/251‑1 (MQ=255) gCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg > 1:433265/1‑175 (MQ=255) cATCAA‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTCTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTc < 1:440352/250‑1 (MQ=255) aa‑‑TGTGTTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCGCCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAg < 1:183157/170‑1 (MQ=255) gtgtTTGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTAtt > 1:145225/1‑251 (MQ=255) ttGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCAc < 1:883914/251‑1 (MQ=255) ttGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCAc < 1:66693/251‑1 (MQ=255) ttGGCGATTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCAc < 1:74269/251‑1 (MQ=255) aTTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCAc > 1:98034/1‑245 (MQ=255) aTTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCACTTCggg > 1:803269/1‑251 (MQ=255) aTTTGGAAATGATCAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCACTTCggg > 1:164072/1‑251 (MQ=255) | ATCTAAATGATAATTGTTCTCAAGTATGAAGTCAAGCGCCTTAATGAAAATAATTATCAAATAAATGGCGATTCAAACTTAACCCGCTTTAAACGGTGCCACTTTAGTTAAATTAAGTGCGGTGGGAATGCCTTGTGTTTTTTCAAACTCAGCGGCATAAGCATAGGCTTCCACACCTTCTTTCAGCGCCTGATGAAGTAATTCGTCATATCTGGCATCAA‑‑TGTGTTTGGCGATTTGGAAATGATTAAAACCATCATGTAGCCCACAGAAGAAAATCACTGCACGATGTCCTTGTTTTTTCATGCTGATCAATTCACGTAAATGTTTTTGACCGCGCGTGGTCACCGCGTCGGGAAACATACCGAGTTTTTTGTCGTTATCTACATAAGTGATGGATTTCACTTCTACATAGCAATCAGGCAGATCTTTGCCTTTCAGTAAGAAATCAATACGACTGTTCTCTTCGCCGTATTTCACTTCGGG > 1/933467‑933949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |