| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 920,376 | A→G | V342V (GTA→GTG) | unknown → | Transcription termination protein NusA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 920,376 | 0 | A | G | 100.0% | 241.0 / NA | 85 | V342V (GTA→GTG) | unknown | Transcription termination protein NusA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (49/36); total (49/36) | |||||||||||
GTGCGCGCGTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTAATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGAAAAACGCCATTACGGCACAAGCC > 1/920129‑920619 | gtgCGCGCGTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATg > 1:279517/1‑251 (MQ=255) cgcgcgTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGAcc < 1:481881/251‑1 (MQ=255) cgcgTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACcac < 1:687662/251‑1 (MQ=255) cgTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACcacac < 1:745175/251‑1 (MQ=255) ttCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAg > 1:739266/1‑251 (MQ=255) tCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAgg < 1:538351/251‑1 (MQ=255) ggCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAgg < 1:364246/248‑1 (MQ=255) aTTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCaa > 1:300420/1‑251 (MQ=255) ttACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGGGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAAc > 1:487986/1‑246 (MQ=255) ccAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCg > 1:815521/1‑251 (MQ=255) gAATTGGGCGGTGAGCGCGTTGATATCGTATTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAAc > 1:747597/1‑238 (MQ=255) gAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAaca > 1:83381/1‑251 (MQ=255) aTTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAacac > 1:486312/1‑250 (MQ=255) ttGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTc > 1:859213/1‑221 (MQ=255) ttGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACaaa > 1:576898/1‑251 (MQ=255) gATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGc > 1:595339/1‑224 (MQ=255) atatCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACcac > 1:784936/1‑208 (MQ=255) atatCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAgtg > 1:709137/1‑251 (MQ=255) atatCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAgtg > 1:147132/1‑251 (MQ=255) atCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGtt > 1:487288/1‑251 (MQ=255) tACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGaa < 1:240348/250‑1 (MQ=255) tACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAAc < 1:630631/251‑1 (MQ=255) tACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAAc < 1:149282/251‑1 (MQ=255) tGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGAGTTGAACTTGtt > 1:751931/1‑251 (MQ=255) aTCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACa > 1:591581/1‑251 (MQ=255) aTCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGCAACGGGCAAAACGTGCGATTGGCGACCCAATTAACCGGATGGGTGTTGAACGTGATGACcacac > 1:139909/1‑189 (MQ=255) ccGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTc > 1:661931/1‑240 (MQ=255) gCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAg < 1:396195/250‑1 (MQ=255) acaATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGaaa < 1:570462/251‑1 (MQ=255) aTTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAg < 1:709330/218‑1 (MQ=255) aTTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTc > 1:7450/1‑232 (MQ=255) aTTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGaaa < 1:249240/248‑1 (MQ=255) gtgATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTACGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGAcc < 1:404944/171‑1 (MQ=255) gATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGAt < 1:204230/232‑1 (MQ=255) gATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATgaag > 1:884864/1‑251 (MQ=255) aTTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACaa > 1:351671/1‑209 (MQ=255) ttAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATgaagaa < 1:721725/251‑1 (MQ=255) tAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAAt > 1:466778/1‑251 (MQ=255) cAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAAt < 1:605906/250‑1 (MQ=255) gATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTc > 1:225858/1‑204 (MQ=255) gATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAAt > 1:120125/1‑248 (MQ=255) tgtgAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAg > 1:92145/1‑215 (MQ=255) gAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGCTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAg > 1:394927/1‑251 (MQ=255) ttCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGt < 1:877053/250‑1 (MQ=255) ccATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAAc > 1:787610/1‑147 (MQ=255) ccATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTtc < 1:91154/251‑1 (MQ=255) aTTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGaaa > 1:132644/1‑208 (MQ=255) tggATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCTATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGtt < 1:448986/250‑1 (MQ=255) ggATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGa < 1:882044/189‑1 (MQ=255) ggATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTag > 1:411784/1‑251 (MQ=255) aTGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTagaa < 1:395312/251‑1 (MQ=255) aaGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTagaag > 1:760722/1‑249 (MQ=255) aaGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAgaagaa > 1:303989/1‑251 (MQ=255) aGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGAc > 1:900164/1‑160 (MQ=255) aGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAAt > 1:412119/1‑251 (MQ=255) tGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGAc < 1:870434/151‑1 (MQ=255) gCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAAc < 1:555515/162‑1 (MQ=255) gCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTtctc < 1:249981/227‑1 (MQ=255) ccATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGt < 1:567583/250‑1 (MQ=255) ggATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAAc < 1:856417/157‑1 (MQ=255) ggATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGa > 1:151657/1‑168 (MQ=255) ggATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGt < 1:126645/246‑1 (MQ=255) gCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGccc > 1:844775/1‑190 (MQ=255) gaagTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTg > 1:242370/1‑250 (MQ=255) aagTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATg < 1:397183/228‑1 (MQ=255) agTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTg > 1:332611/1‑220 (MQ=255) aTCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGAc < 1:591741/251‑1 (MQ=255) aaGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGaa < 1:87070/251‑1 (MQ=255) gCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGa > 1:274962/1‑251 (MQ=255) ggTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAAt < 1:481502/167‑1 (MQ=255) gTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAAt > 1:212299/1‑166 (MQ=255) gTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGt > 1:236189/1‑176 (MQ=255) gTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGAc > 1:479556/1‑233 (MQ=255) aaaCGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGt > 1:82574/1‑192 (MQ=255) gCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCaaa > 1:755036/1‑251 (MQ=255) tttGGCGACCCAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAAcc < 1:452670/250‑1 (MQ=255) cccAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGaaa < 1:694759/251‑1 (MQ=255) ccAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAattat < 1:529717/131‑1 (MQ=255) cAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTGTGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGaaaaa > 1:431107/1‑251 (MQ=255) cAATTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGaaaaa > 1:193283/1‑251 (MQ=255) aaTTAACCGGTTGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTagaag > 1:136556/1‑159 (MQ=255) aCCGGTTGGGTGTTGAACGTGATGACCACACAGGAAATGAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCGCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATATGGTCGAAGAATTGCAAACCCGTGCGAAAAACGCCAt < 1:869583/251‑1 (MQ=255) tGGGTGTTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGAc > 1:85151/1‑189 (MQ=255) gtgtTGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGAAAAACGCCATTACGGcaca > 1:745441/1‑251 (MQ=255) tGAACGTGATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGAAAAACGCCATTACGGCACAAGcc < 1:395519/251‑1 (MQ=255) | GTGCGCGCGTTCAGGCAATTACCAATGAATTGGGCGGTGAGCGCGTTGATATCGTACTTTGGGACGACAATCCGGCACAATTTGTGATTAACGCCATGGCGCCGGCAGATGTGAGTTCCATTGTGGTGGATGAAGATAAACATGCCATGGATATTGCCGTCGAAGAAGTAAATCTGGCGCAAGCCATCGGTCGTAACGGGCAAAACGTGCGTTTGGCGACCCAATTAACCGGTTGGGTGTTGAACGTAATGACCACACAGGAACTCAATGCGAAACACCAAGCGGAAGATGACAAAGTGTTGAACTTGTTCATTGATACATTAGAAATTGATGAAGAATTCGCCCAATTATTAATTGATGAAGGTTTCTCTACGTTAGAAGAATTGGCTTATGTTTCCGTCAGCGAATTGACTGCCATTGACGGTTTGGAAGACGAAGATTTGGTCGAAGAATTGCAAACCCGTGCGAAAAACGCCATTACGGCACAAGCC > 1/920129‑920619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |