| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 914,628 | G→T | intergenic (‑149/+57) | unknown ← / ← unknown | Integrase/GMP synthase [glutamine‑hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine‑hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 914,628 | 0 | G | T | 100.0% | 219.2 / NA | 79 | intergenic (‑149/+57) | unknown/unknown | Integrase/GMP synthase [glutamine‑hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine‑hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (41/38); total (41/38) | |||||||||||
CCTGCGGGAGTGACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATAGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACAGAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACCCAGTCATATTT > 1/914382‑914870 | ccTGCGGGAGTGACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACatagag < 1:86361/251‑1 (MQ=255) cTGCGGGAGTGACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAgg < 1:567246/251‑1 (MQ=255) cTGCGGGAGTGACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAgg < 1:521015/251‑1 (MQ=255) gACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATaa > 1:632161/1‑251 (MQ=255) aCTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAAc < 1:700471/251‑1 (MQ=255) aCTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAAc < 1:485276/251‑1 (MQ=255) cTGATTCATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAgg < 1:713484/239‑1 (MQ=255) aTACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTAtt > 1:775076/1‑251 (MQ=255) cATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAGTAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTg > 1:447236/1‑251 (MQ=255) cATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTg > 1:876352/1‑251 (MQ=255) gTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAAc < 1:576753/245‑1 (MQ=255) cGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:115321/251‑1 (MQ=255) cGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:739579/251‑1 (MQ=255) cGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:303613/251‑1 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAAc > 1:36541/1‑221 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGa > 1:562477/1‑229 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa > 1:498134/1‑251 (MQ=255) ttATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa < 1:326175/248‑1 (MQ=255) ggTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATACCAAAACCCCGACATAGAGGGGCTTTATAAc > 1:424117/1‑200 (MQ=255) gTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTcc < 1:894574/246‑1 (MQ=255) tgatttgattTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCg < 1:263553/249‑1 (MQ=255) atttgatttTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGc < 1:279054/251‑1 (MQ=255) gCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa > 1:814399/1‑199 (MQ=255) gCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGt > 1:759583/1‑250 (MQ=255) tttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCata > 1:326503/1‑251 (MQ=255) tttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCata < 1:509370/251‑1 (MQ=255) ttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCatat < 1:898925/251‑1 (MQ=255) ttattaCGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc < 1:242452/251‑1 (MQ=255) ccATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTcc > 1:851380/1‑201 (MQ=255) ccATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:337712/1‑242 (MQ=255) ccATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGa > 1:93094/1‑251 (MQ=255) ccATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGa > 1:38019/1‑251 (MQ=255) ccATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGAATGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAgg > 1:790231/1‑143 (MQ=255) cATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:19638/1‑241 (MQ=255) gTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGttt > 1:77657/1‑251 (MQ=255) tCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTa > 1:333187/1‑251 (MQ=255) tGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACt < 1:700889/251‑1 (MQ=255) gTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGaaa < 1:548186/149‑1 (MQ=255) aTTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCg > 1:506800/1‑251 (MQ=255) tttGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTAc < 1:583874/233‑1 (MQ=255) cTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAGATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAAt > 1:215371/1‑251 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAGCCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAata > 1:718824/1‑147 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTc > 1:372119/1‑159 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAAt > 1:85610/1‑228 (MQ=255) tttCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACcac > 1:713069/1‑195 (MQ=255) tCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGaaa < 1:63604/122‑1 (MQ=255) tCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCa > 1:649806/1‑251 (MQ=255) cAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:694642/1‑189 (MQ=255) aaTACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTtat < 1:151228/97‑1 (MQ=255) aTACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGaaa > 1:804624/1‑109 (MQ=255) aTACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:541859/127‑1 (MQ=255) aTACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc < 1:737307/187‑1 (MQ=255) cacacCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc < 1:269726/251‑1 (MQ=255) cGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGgtg < 1:337328/251‑1 (MQ=255) tAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAAtg < 1:796132/251‑1 (MQ=255) tGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGaaa > 1:787741/1‑88 (MQ=255) aTACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACg > 1:428089/1‑158 (MQ=255) aTACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc < 1:151823/219‑1 (MQ=255) aCTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:354348/1‑150 (MQ=255) cTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGccc < 1:256910/226‑1 (MQ=255) cTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGt > 1:123122/1‑251 (MQ=255) cTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGt > 1:496205/1‑251 (MQ=255) gAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGgtg < 1:242988/217‑1 (MQ=255) aaaTGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTa > 1:335040/1‑251 (MQ=255) tGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:869657/251‑1 (MQ=255) tGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:846966/251‑1 (MQ=255) tGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:268933/251‑1 (MQ=255) ggTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:717609/1‑140 (MQ=255) gTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGa < 1:80195/168‑1 (MQ=255) gTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:88981/1‑251 (MQ=255) gTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:898333/1‑251 (MQ=255) gTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:274762/1‑251 (MQ=255) aTGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcgcg > 1:720754/1‑251 (MQ=255) gAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc > 1:21730/1‑192 (MQ=255) aaaTAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAAcc < 1:860458/251‑1 (MQ=255) aaaTAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAAc < 1:619546/250‑1 (MQ=255) tAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAAt > 1:796768/1‑201 (MQ=255) aCCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc < 1:558168/181‑1 (MQ=255) ccccGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACCCAGTCATAttt < 1:101906/251‑1 (MQ=255) ccccGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACCCAGTCATAttt < 1:669133/251‑1 (MQ=255) | CCTGCGGGAGTGACTGATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATAGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACAGAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACCCAGTCATATTT > 1/914382‑914870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |