Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	911,281	G→A	intergenic (‑51/‑204)	unknown ← / → unknown	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	911,281	0	G	A	100.0%	24.6 / NA	11	intergenic (‑51/‑204)	unknown/unknown	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (7/4);  total (7/4)

GACTTATTTTAAGTTTAAGTCTTTTTTGATTTTGTGAACTAAGCCGGTACCGATTTCTTTACTACCATGGTAGGGAAAGACAGTTTGGCACTCATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAGGATAGAATACAACAAATTTGTTGTATGAGCAACATTTTTGTTGTGTTTTTTAAGTGATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAGAACTTACGGAAATGTCTTGGGTTTTGTAGAATGGGCGTTTCTATTTTTTACTAAGGAACATATCTATGAACACAACCAACATTATTGCCGGAATTATCGTTAT  >  1/911045‑911522                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  gACTTATTTTAAGTTTAAGTCTTTTTTGATTTTGTGAACTAAGCCGGTACCGATTTCTTTACTACCATGGTAGGGAAAGACAGTTTGGCAGTCATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACAttt                                                                                                                                                                                                                                     >  1:211390/1‑251 (MQ=255)    ttATTTTAAGTTTAAGTCTTTTTTGATTTTGTGAACTAAGCCGGTACCGATTTCTTTACTACCATGGTAGGGAAAGACAGTTTGGCAGTCATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTttg                                                                                                                                                                                                                                  <  1:180132/251‑1 (MQ=255)                                                              ctacCATGGTAGGGAAAGACAGTTTGGCAGTCATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGAGTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAAc                                                                                                                                                                        <  1:35867/251‑1 (MQ=255)                                                                                             cATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAgg                                                                                                                                                                   <  1:72305/225‑1 (MQ=255)                                                                                                                                                                         gAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTAt                                                             >  1:106857/1‑251 (MQ=255)                                                                                                                                                                                             gggTACCTCCTTTGCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTATTTTTTACTAAGGAACatat                                          >  1:671737/1‑250 (MQ=255)                                                                                                                                                                                                          gCTATACAGTGAAGATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTAt                                                             >  1:120873/1‑218 (MQ=255)                                                                                                                                                                                                                      agATAGAATACAACAAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGt                                                                                   >  1:568196/2‑184 (MQ=255)                                                                                                                                                                                                                               acaacaAATTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTATTTTTTACTAAGGAACATATCTATGAACACAACCAACATTATTGCCGGAATTAtt       >  1:355306/1‑250 (MQ=255)                                                                                                                                                                                                                                    aaaTTTGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTATTTTTTACTAAGGAACATATCTATGAACACAACCAACATTATTGCCGGAATTAttgtcat  <  1:439048/251‑7 (MQ=255)                                                                                                                                                                                                                                       tttGTTATATGTGCAACATTTTTGTTGTGTTTTTTAAATAATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAAAACTTACGGAAATGTCTTGGGTTTCGTAAAATAGGAGTTTCTATTTTTTACTAAGGAACATATCTATGAACACAACCAACatt                      >  1:389025/1‑228 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  GACTTATTTTAAGTTTAAGTCTTTTTTGATTTTGTGAACTAAGCCGGTACCGATTTCTTTACTACCATGGTAGGGAAAGACAGTTTGGCACTCATTCAACGTTACCTTGCGATGACTTCCGCGCTTGGTTGCTTCGACTTTGCAGCCTTGCTCAAGCAAGTATCGCAAGAATTCACTGTATTTCATCGGGGTACCTCCTTTGCTATACAGTGAGGATAGAATACAACAAATTTGTTGTATGAGCAACATTTTTGTTGTGTTTTTTAAGTGATGATTTATTTGATAAACTTTTTTCAAAAGCCTGTTTAAAACGTAGGTTTTTTTAATAATGGAATCTGCGACGCAGATCGCAAAATTGAAATAAATTTGAGGGAGAACTTACGGAAATGTCTTGGGTTTTGTAGAATGGGCGTTTCTATTTTTTACTAAGGAACATATCTATGAACACAACCAACATTATTGCCGGAATTATCGTTAT  >  1/911045‑911522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑