Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	910,509	A→G	Q106Q (CAA→CAG)	unknown →	phage‑related protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	910,509	0	A	G	100.0%	187.6 / NA	65	Q106Q (CAA→CAG)	unknown	phage‑related protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/27);  total (38/27)

AATCTGAAGCTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATCTGGAACATGGCTTGCCGTGGCTTGAACAAATGGGGCGCGGTGTGAATCTGGCGGATTGGGAAATTAAAATAAAGCGGCATGTACTGGGAACGGAAGGAGTGTCAAAAATTACCGATTATCAGGCGGATTTTGAACCCGATTCGCGCAAGCTGACAATCTCAATTGACTATCAAGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTTGTGCGAGCATTTCATTGAGTA  >  1/910268‑910749                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                 aaTCTGAAGCTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTa                                                                                                                                                                                                                                          <  1:463689/250‑1 (MQ=255)  aTCTGAAGCTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACg                                                                                                                                                                                                                                        <  1:242264/251‑1 (MQ=255)          cTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGcaacaa                                                                                                                                                                                                                                >  1:466254/1‑251 (MQ=255)          cTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGcaacaa                                                                                                                                                                                                                                >  1:342967/1‑251 (MQ=255)          cTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGcaacaa                                                                                                                                                                                                                                >  1:30810/1‑251 (MQ=255)          cTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTC‑AAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGcaacaa                                                                                                                                                                                                                                >  1:187175/1‑250 (MQ=255)           tATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCaacaac                                                                                                                                                                                                                               <  1:296157/251‑1 (MQ=255)            aTCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAacaaca                                                                                                                                                                                                                              >  1:184280/1‑251 (MQ=255)            aTCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAacaaca                                                                                                                                                                                                                              >  1:399625/1‑251 (MQ=255)                cacaGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGAc                                                                                                                                                                                                                           <  1:654092/250‑1 (MQ=255)                    gAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGAc                                                                                                                                                                                                                                               >  1:30634/1‑226 (MQ=255)                    gAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAg                                                                                                                                                                                                                             >  1:95316/1‑244 (MQ=255)                    gAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCa                                                                                                                                                                                                                       >  1:273577/1‑250 (MQ=255)                      aTGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAAGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACg                                                                                                                                                                                                                     >  1:423446/1‑250 (MQ=255)                        gTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGAc                                                                                                                                                                                                                                               >  1:601833/1‑222 (MQ=255)                        gTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGAc                                                                                                                                                                                                                           <  1:825599/242‑1 (MQ=255)                        gTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCta                                                                                                                                                                                                                  >  1:838375/1‑251 (MQ=255)                           cAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               <  1:422224/251‑1 (MQ=255)                              aCCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGc                                                                                                                                                                                                            <  1:872055/251‑1 (MQ=255)                              aCCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGc                                                                                                                                                                                                            <  1:537712/251‑1 (MQ=255)                                  gCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               <  1:397764/244‑1 (MQ=255)                                    cTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAg                                                                                                                                                                                                      <  1:746853/251‑1 (MQ=255)                                    cTTTGGTCGTTTGCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAg                                                                                                                                                                                                      <  1:677169/251‑1 (MQ=255)                                                gCCAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAAt                                                                                                                                                                                           >  1:191585/1‑250 (MQ=255)                                                 ccAATGACTGGTTTCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATc                                                                                                                                                                                          <  1:568297/250‑1 (MQ=255)                                                            tttCTAGATTTAGAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCAttttt                                                                                                                                                                              >  1:693062/1‑251 (MQ=255)                                                                  gatttagAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGa                                                                                                                                                                        >  1:106774/7‑251 (MQ=255)                                                                        gAACATGGCTTGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGAt                                                                                                                                                                  >  1:500570/1‑251 (MQ=255)                                                                                  tGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAAttt                                                                                                                                                        <  1:711722/251‑1 (MQ=255)                                                                                  tGCCATGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAAttt                                                                                                                                                        <  1:453999/251‑1 (MQ=255)                                                                                   gccatGGCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAAttt                                                                                                                                                        >  1:391621/5‑250 (MQ=255)                                                                                        ggCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               <  1:129661/190‑1 (MQ=255)                                                                                        ggCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGc                                                                                                                                                                                                            >  1:692418/1‑193 (MQ=255)                                                                                        ggCTTGAGCAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCgcgc                                                                                                                                                   >  1:659441/1‑250 (MQ=255)                                                                                             gagcAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAAt                                                                                                                                             >  1:177733/4‑251 (MQ=255)                                                                                              agcAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAAtt                                                                                                                                            >  1:59655/3‑251 (MQ=255)                                                                                                cAAATGGGGCGCGGTGTCAATCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAAtttt                                                                                                                                          >  1:543249/1‑251 (MQ=255)                                                                                                                 caaTCTGGCAGATTGGGAAATCAAAATTAAGCGTCATGTGTTGGAGACTGAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTcaac                                                                                                                         <  1:236200/250‑1 (MQ=255)                                                                                                                                                   catgtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCtaat                                                                                       >  1:550749/16‑251 (MQ=255)                                                                                                                                                      gtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATggg                                                                                                      <  1:864945/221‑1 (MQ=255)                                                                                                                                                      gtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGa                                                                                                <  1:857766/227‑1 (MQ=255)                                                                                                                                                      gtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAg                                                                                    >  1:207534/13‑251 (MQ=255)                                                                                                                                                      gtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAg                                                                                    >  1:699008/13‑251 (MQ=255)                                                                                                                                                      gtgttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAg                                                                                    >  1:745130/13‑251 (MQ=255)                                                                                                                                                        gttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               >  1:857539/11‑126 (MQ=255)                                                                                                                                                        gttggagactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAAt                                                                                            >  1:524064/11‑241 (MQ=255)                                                                                                                                                              gactgAAGGAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGAt                                                                                                         >  1:302231/5‑222 (MQ=255)                                                                                                                                                                      gAGTGTCAAAAATCACCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               <  1:333726/112‑1 (MQ=255)                                                                                                                                                                                 atcaCCGACTATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCa                                                         >  1:134219/4‑251 (MQ=255)                                                                                                                                                                                       gactATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAAGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGAc                                                     >  1:451873/4‑249 (MQ=255)                                                                                                                                                                                         ctATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATc                                                          <  1:827053/241‑1 (MQ=255)                                                                                                                                                                                         ctATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGgcg                                                 >  1:337650/2‑251 (MQ=255)                                                                                                                                                                                         ctATCAGGCTGATTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGgcg                                                 >  1:577265/2‑251 (MQ=255)                                                                                                                                                                                                    aTTTTGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAg                                      >  1:191091/1‑251 (MQ=255)                                                                                                                                                                                                     ttttGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATAc                                                                                                                                                                                                               <  1:45263/81‑1 (MQ=255)                                                                                                                                                                                                     ttttGAACCCGATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGc                                     <  1:651485/251‑1 (MQ=255)                                                                                                                                                                                                               gATTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATAAAGACGGCGCGCCATTTCAGCTTTTCGcaca                           >  1:375028/1‑251 (MQ=255)                                                                                                                                                                                                                aTTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCacac                          <  1:720862/251‑1 (MQ=255)                                                                                                                                                                                                                aTTCGCGCAAACTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCacac                          <  1:886721/251‑1 (MQ=255)                                                                                                                                                                                                                       caaacTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTtgtg                    <  1:811126/246‑1 (MQ=255)                                                                                                                                                                                                                           cTGACAATATCCATTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTTGTGCGAGc               <  1:454841/251‑1 (MQ=255)                                                                                                                                                                                                                                   atccaTTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGAt                                                                                                         <  1:817800/149‑1 (MQ=255)                                                                                                                                                                                                                                   atccaTTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTTGTGCGAGCATTTCAtt       >  1:803774/5‑251 (MQ=255)                                                                                                                                                                                                                                     ccaTTGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTcaac                                                                                                                         >  1:40454/3‑135 (MQ=255)                                                                                                                                                                                                                                        ttGATTATCAGGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTTGTGCGAGCATTTCATTGAGTa  >  1:198556/1‑251 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                 AATCTGAAGCTATCGCACAGAATGTACAAACCCGCCTTTGGTCGTTTGCCAATGACTGGTTTCTAGATCTGGAACATGGCTTGCCGTGGCTTGAACAAATGGGGCGCGGTGTGAATCTGGCGGATTGGGAAATTAAAATAAAGCGGCATGTACTGGGAACGGAAGGAGTGTCAAAAATTACCGATTATCAGGCGGATTTTGAACCCGATTCGCGCAAGCTGACAATCTCAATTGACTATCAAGACATTTACGGGCAACAACAGACCGCACGCTATACAGCTTAAAGTGCGGTCAAATCGACCGCATTTTTTAATGAACCGATAAATTAATTTCGCGCCCTAATTTTTTAAAGGCTTTTTCAACAAAATCAATTTTGGATGGGTGGCGAAAATCTAATAAGCGATCGACTTGCGGCATGTGAACATCAAGACGGCGCGCCATTTCAGCTTTTCGCACACCTTGTGCGAGCATTTCATTGAGTA  >  1/910268‑910749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑