New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 2 = 15490896 (0.900)23 (0.230)
+ATTT		 11/412 6.3 31.0% intergenic (‑271/+796) unknown/unknown Deoxyribose‑phosphate aldolase (EC 4.1.2.4)/hypothetical protein
?3 = 20679 6 (0.060)coding (95/348 nt) unknown hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTTAGTATAAGGCGATTTTATGCCATCAAGCCCTCTTTCACGAAAGGCTTTTAACCAATAAATGACTTGAGAATGAGGAATCTTA  >  3/20433‑20687
                                                                                                                                                                                                                                                      |        
gTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAttta   >  1:10064/1‑248 (MQ=11)
gTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAttta   >  1:500863/1‑248 (MQ=11)
gTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAttta   >  1:749024/1‑248 (MQ=11)
gTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAttta   >  1:777479/1‑248 (MQ=11)
 tttttGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAtttag  <  1:660182/251‑5 (MQ=11)
           ccccAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTT‑GTGTAAGGTGATTTTACGCCATCAAGCCCTCTTTCACGAAAGGCTTTT‑‑CCAATAAATGACTTGAGAACGAGAAAttt    <  1:270846/239‑3 (MQ=11)
                                                                                                                                                                                                                                                      |        
GTTTTTGATCGCCCCAATTCCACTAACTTTTTTAGATAATCAATCTCCGCTTTTTCAAGGGCGGGTTCTCGTTTCAGTTTTTTAAAGGCTTGTGGTGAAAAGTCGGTTGTTTCAGCCACTTCAATCTGCGTTTTTTTCATTTTGGGTTTCAGAATTTTGGAGGTTTTAGGTTTAGTATAAGGCGATTTTATGCCATCAAGCCCTCTTTCACGAAAGGCTTTTAACCAATAAATGACTTGAGAATGAGGAATCTTA  >  3/20433‑20687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.