| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 1,016,059 | Δ849 bp | [unknown]–[unknown] | [unknown], [unknown] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 1016059 | 1016907 | 849 | 33 [0] | [0] 33 | [unknown]–[unknown] | [unknown],[unknown] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1016058 | 0 (0.000) | 33 (0.400) | 23/426 | 2.4 | 100% | coding (74/627 nt) | unknown | PTS system, galactitol‑specific IIC component |
| ? | 1 | 1016908 = | 0 (0.000) | coding (275/1044 nt) | unknown | Galactitol‑1‑phosphate 5‑dehydrogenase (EC 1.1.1.251) | |||||
AATGATGTATTAATTGAAGCGACGTCTATCCGTTAAAAGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTAACACCCATTGCCAAGCAAGCACGTAAAAAATTACAGGCGCGTTTCGGCGGCGAAGAATTTCTTATCGGCTTGGATCCGGCGCTCTTGCTTGGACACACCTCAGTGGTGTCCGCCAGTTTGATTTTTATTCCGCTGACTATTTTGGTTGCCGTTATCTTACCGGGAAATCAGGTGCTGCCTTTCGGCGATTTGGCCACTATCGGTTTCTTTGTCGCCATGGCGGTAGCGGTGCATCAGGGCAATTT > 1/1015941‑1016304 | ggattattatcggtattttggcgggctatccgttaaaagacattttgcagtTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaa > 1:830556‑M1/26‑118 (MQ=255) gattattatcggtattttggcgggctatccgttaaaagacattttgcagTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcacc > 1:308594‑M1/25‑117 (MQ=255) tattttggcgggctatccgttaaaaGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatga < 1:522105‑M1/238‑146 (MQ=255) tATCCGTTAAAAGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaac < 1:772758‑M1/251‑160 (MQ=255) aTCCGTTAAAAGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaac > 1:880018‑M1/1‑91 (MQ=255) gTTAAAAGACATTTTGCAGTTAGCAGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattc < 1:283564‑M1/115‑29 (MQ=255) ttAAAAGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgaaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaacc < 1:334519‑M1/221‑136 (MQ=255) aaaGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacgg < 1:144938‑M1/251‑169 (MQ=255) aaaGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacgg < 1:733984‑M1/251‑169 (MQ=255) aaaGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacgg < 1:655604‑M1/251‑169 (MQ=255) ggTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcac < 1:431969‑M1/242‑180 (MQ=255) gTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaat > 1:263935‑M1/1‑62 (MQ=255) tAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatc < 1:402464‑M1/250‑190 (MQ=255) tAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatc < 1:652046‑M1/250‑190 (MQ=255) ccGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaa > 1:177772‑M1/1‑55 (MQ=255) gATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggt > 1:16234‑M1/1‑45 (MQ=255) tgttgtTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcga < 1:805503‑M1/251‑209 (MQ=255) gttAATGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacgg > 1:598786‑M1/1‑39 (MQ=255) aaTGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaat < 1:191295‑M1/251‑216 (MQ=255) aaTGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaat < 1:813162‑M1/251‑216 (MQ=255) aTGCCACGCGTCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatg < 1:859439‑M1/251‑217 (MQ=255) tCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatgtgattgtggt > 1:375359‑M1/1‑25 (MQ=255) tCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtc > 1:874760‑M1/1‑25 (MQ=255) tCATTAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattc < 1:171925‑M1/53‑29 (MQ=255) tAAACCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatgtgattgtggtagga < 1:80011‑M1/251‑231 (MQ=255) aaaCCAATCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacg > 1:82354‑M1/1‑20 (MQ=255) aTCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatg < 1:68160‑M1/230‑217 (MQ=255) aTCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcg > 1:74236‑M1/1‑14 (MQ=255) aTCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtc < 1:584577‑M1/188‑175 (MQ=255) tCATGGACGGTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatgtgattgtggtaggagccggtac < 1:567799‑M1/251‑239 (MQ=255) gTTTgcgacgaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatat > 1:408939‑M1/1‑4 (MQ=255) gTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctattacggtgggtctgcacgccattaatctggcgcaggggtgtagcgataaaaatgtgattgtggtaggagccggtactattggct < 1:493545‑M1/250‑247 (MQ=255) gTTTgcgaagaatgtcacaaaggatattattcattatgtaaaaactacaatttcatcggttcccgtcgcttcggcgccaatgcggaatatatttgcgtcaacaagaaaaatttggtgaaagtatcaccagattccaaccctttgcatgatgcttttatcgaacctatta > 1:195043‑M1/1‑4 (MQ=255) | AATGATGTATTAATTGAAGCGACGTCTATCCGTTAAAAGACATTTTGCAGTTAGCGGTAAAAACCGCTGCAGTGATGTTGTTAATGCCACGCGTCATTAAACCAATCATGGACGGTTTAACACCCATTGCCAAGCAAGCACGTAAAAAATTACAGGCGCGTTTCGGCGGCGAAGAATTTCTTATCGGCTTGGATCCGGCGCTCTTGCTTGGACACACCTCAGTGGTGTCCGCCAGTTTGATTTTTATTCCGCTGACTATTTTGGTTGCCGTTATCTTACCGGGAAATCAGGTGCTGCCTTTCGGCGATTTGGCCACTATCGGTTTCTTTGTCGCCATGGCGGTAGCGGTGCATCAGGGCAATTT > 1/1015941‑1016304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |