| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1202140 = | 2 (0.020) | 9 (0.110) +C |
6/428 | 6.4 | 24.4% | intergenic (+131/+464) | unknown/unknown | Na+/H+ antiporter/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | 1 | = 1648073 | 54 (0.640) | intergenic (+40/+88) | unknown/unknown | hypothetical protein/LSU ribosomal protein L17p | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1202372‑1202140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACCGTACGCTATGCGTATGGAATCAAAG < 1/1648073‑1648045 | GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGT > 1:349581/1‑251GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGT > 1:41092/1‑251GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:19711/250‑1GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:495300/250‑1 CGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGTTAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAA < 1:773199/250‑1 AAAGCGCGGAAAGGAGAGAGTATAGTCATCAAAGAAGATTGGCGGTGATAGGGCGGTGGTACCTCCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAG < 1:579189/250‑1 ATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCTGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGCCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAG > 1:636028/1‑215 GCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:173328/142‑1 GCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATG < 1:707938/138‑1 | GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1202372‑1202140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACCGTACGCTATGCGTATGGAATCAAAG < 1/1648073‑1648045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |