| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 1,137,919 | 2455 bp→AA | [unknown]–[unknown] | [unknown], unknown, unknown, [unknown] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 1137919 | 1140373 | 2455 | 57 [0] | [0] 56 | [unknown]–[unknown] | [unknown],unknown,unknown,[unknown] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1137918 | 0 (0.000) | 56 (0.670) +AA |
37/426 | 1.1 | 100% | coding (799/858 nt) | unknown | Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) |
| ? | 1 | 1140374 = | 0 (0.000) | coding (284/1002 nt) | unknown | hypothetical protein | |||||
TGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGTGAAATGGTCGTGTTATAAGTTACCGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1137674‑1137918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTTTTGAGATCATCAATTATCGCTAAAGAGTTATCCAGATACCCTCCATAATTCATCATAAATGCTACAATGATCATTTTTGTGGCAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATCTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTTACGCCAATAATTGTAAAAAGTGAGTTAGCAAAATTGCTACTCATAGATTGACTAA > 1/1140374‑1140605 || TGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAG > 1:535426/1‑251 GCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACT > 1:581924/1‑248 ATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACT > 1:313499/1‑244 ccTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGA < 1:727216/249‑1 CTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGA < 1:722471/251‑1 CTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGA < 1:498708/251‑1 TTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAA < 1:300441/251‑1 GAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTATTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTATCTAGTTTTAAGATCATCAATTATCGat < 1:376033/250‑3 CCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGT > 1:281989/1‑251 AAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCt < 1:136156/251‑2 ACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCtag < 1:549450/251‑4 ACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCtag < 1:204509/251‑4 ACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCtag < 1:215261/251‑4 CACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATAC < 1:238080/251‑1 CACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATAC < 1:100361/251‑1 CGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATAC > 1:142546/1‑249 GGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCC > 1:848174/1‑250 GGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTACCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCt > 1:98597/1‑241 GCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCc > 1:885011/1‑245 CAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAG < 1:477613/230‑1 GTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAAT > 1:4241/1‑250 GTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATT > 1:766993/1‑216 TGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTC < 1:609080/251‑1 TGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTC < 1:587990/251‑1 TGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAAT < 1:515339/249‑1 TGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAAT < 1:228092/249‑1 TGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTGTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAA < 1:438952/248‑1 GCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCA > 1:386138/1‑251 GCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATA < 1:594226/237‑1 AATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATA > 1:476571/1‑251 AATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGT‑‑TAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAA > 1:241258/1‑251 AAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTA < 1:798024/203‑1 AATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCtag > 1:803188/1‑217 AATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATAC < 1:600198/224‑1 AATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGA > 1:78263/1‑191 TAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAAT < 1:826185/251‑1 ATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATT < 1:523010/251‑1 CGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTATCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTT < 1:351355/237‑1 ATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTC > 1:91944/1‑202 ATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGAT < 1:564690/138‑1 TTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGG < 1:277751/251‑1 GTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGA > 1:279010/1‑119 GTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAAT > 1:879531/1‑143 GTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCtag < 1:892916/124‑4 GTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATGTTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGT > 1:90798/1‑251 GCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCCATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGG > 1:148022/1‑183 GCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAA > 1:37942/1‑251 GCCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGG > 1:149953/1‑209 CCTCCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAAT < 1:138048/251‑1 CCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAAT < 1:54768/251‑1 CCTATCGTTCGTCTCTTGCCACATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAAT > 1:224522/1‑251 CATTTGGCGAAATGGTTGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAA > 1:710751/1‑251 ttGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGA < 1:291681/249‑1 tGTGTTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGAT < 1:649167/250‑1 TTATAAGAAACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGAC < 1:218607/251‑1 gaaACCGGCGTTTTAACTAGTTTTAAGATCATCAATTATCGATAAAGAGTTATCTAGATACCCCCCATAATTCATCATAAATGCCACAATAATCATTTTTGTGACAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATTTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGACTAA > 1:26449/4‑248 || TGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAAATAAATAGATTTTGGTTTTTACCGCGTTTGGCAATTTTGCTGACTTCCGGTTGATAATCGGTTTCCGTTTTGTCATCCGTCGGCTGAATGGTTTTGTTATCGTTCATCTCTGCCTCCTATCGTTCGTCTCTTGCCACATTTGGTGAAATGGTCGTGTTATAAGTTACCGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1137674‑1137918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTTTTGAGATCATCAATTATCGCTAAAGAGTTATCCAGATACCCTCCATAATTCATCATAAATGCTACAATGATCATTTTTGTGGCAAAATCATAAATTAATGCTGTTGCTGGAGCTTCAATCTTGCCAGATATTACGGCAAATCCTTTTCCTAAAAAGTAAATTGTCAGTGTTACGCCAATAATTGTAAAAAGTGAGTTAGCAAAATTGCTACTCATAGATTGACTAA > 1/1140374‑1140605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |