| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,476,933 | +T | intergenic (‑151/+19) | unknown ← / ← unknown | hypothetical protein/Metal‑dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,476,930 | 1 | . | T | 100.0% | 172.1 / NA | 66 | intergenic (‑148/+22) | unknown/unknown | hypothetical protein/Metal‑dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (30/36); total (30/36) | |||||||||||
AGGACGGATAACTGGGCTCAAATTGCGGATAAGGATAATAACCCGCGCAGGCGGTTAAAATAGAAATCGGTAAAACAAGTAAGTATTTTTTTAACATGATATTCC‑TT‑AGGTTGAAAATAGATGAATCATTGCCTCGCTGCAGCAACCTTAAAAGTCCGAATTACGTGTAACTATATATGATATGGCTTTAATATAAATGGCGACTGAAGCAAGAATGCCCGTTTGACCCTGATTTTCCGAAATAG‑TTTACGCATTCCGAATTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAGGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCAAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTCTCTTGCTCTTGGGCTTCGCGCTCCACCACTTGACGGC > 1/1476686‑1477151 | ggaccGGATAACCAGGTTCAAATTGCGGATAAGGATAATAACCGGCACAGGCGGTTAAAATAGAAATCGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAG‑ttttacac > 1:396556/5‑239 (MQ=255) cGGATAAGGATAATAACCGGCACAGGCGGTTAAAATAGAAATCGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATa < 1:711569/251‑1 (MQ=255) ggataaTAACCGGCACAGGCGGTTAAAATAGAAATCGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCCTTT‑AGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAAAGCCCGTTTGACCCTGTTTTTTCGAAATAGTTTTACACTTTCCGCCTTTTTCTTACTTCTCGCTCAGATACGGATc > 1:43973/1‑250 (MQ=255) ggataaTAACCGGCACAGGCGGTTAAAATAGAAATCGGTAAAATAAATAAGTATTTTTTTTACATGATATTCC‑TTCAGGTTGAAAAAAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAA‑‑‑‑ACAT‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGGTTGACCCTGTTTTTTCGAAATAGTTTTACACTTTTCGACTTTTTTTTACTTCTCGCTCAGATACGGATCg > 1:386685/1‑251 (MQ=255) gataaTAACCGGCACAGGCGGTTAAAATAGAAATCGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGGTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGAt < 1:444596/248‑1 (MQ=255) aaccggcacAGGCGGTTAAAATAGAAATCGGTAAAATAAGTAAGGATTTTTTTTACATGATATTTC‑TTCAGGGTGGAAATAGATTAATTATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAAAGCCCGTTTGACCCTGTTTTTTCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAaag > 1:189979/9‑250 (MQ=255) aaccggcacAGGCGGTTAAAATAGAAATCGGGAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGAt > 1:580545/9‑242 (MQ=255) gTTAAAATAGAAATCGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAG‑ttttacac > 1:771184/1‑186 (MQ=255) cGGTAAAATAAGTAAGTATTTTTTTAACATGATATTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTCTCCGACTTTTTCTTACTTCTCGCTCAGATAc < 1:42256/210‑1 (MQ=255) gtaagtatttttttaacatgatattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCAttt > 1:187543‑M2/108‑251 (MQ=255) gtatttttttaacatgatattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTtcct > 1:702070‑M2/104‑250 (MQ=255) atTCC‑TTCAGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAG‑ttttacactttc > 1:424091/1‑139 (MQ=255) acatgatattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCAt > 1:842769‑M2/93‑251 (MQ=255) ccttcaGGTTGAAAATAGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGAt > 1:391927/6‑178 (MQ=255) atattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTtcc > 1:333155‑M2/88‑233 (MQ=255) atattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCa < 1:204574‑M2/158‑1 (MQ=255) tattccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCaa > 1:426788‑M2/87‑251 (MQ=255) tccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAatat < 1:690648‑M2/168‑1 (MQ=255) tccttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAatat < 1:722156‑M2/168‑1 (MQ=255) ttcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGAt < 1:446602‑M2/171‑1 (MQ=255) tcaggttgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATc < 1:471959‑M2/172‑1 (MQ=255) aGATTAATCATTGTCCCGCTGCAGCAACCTTAAAAGCCTGAATTACGTATAACCAT‑‑‑‑‑ATATGGCTTT‑‑‑‑T‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGAt > 1:460939/1‑162 (MQ=255) tgaaaatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAcc < 1:472576‑M2/178‑1 (MQ=255) aatagattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGt < 1:66273‑M2/182‑1 (MQ=255) gattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAc > 1:855640‑M2/66‑242 (MQ=255) gattaatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAAt > 1:761325‑M2/66‑251 (MQ=255) atccggtcccttccgtgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAaccg < 1:333148‑M2/179‑2 (MQ=255) aatcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCaa > 1:845801‑M2/62‑251 (MQ=255) atcattgtcccgctgcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAc < 1:150714‑M2/177‑1 (MQ=255) gtcccgctgcagcaaccttaaaagcctgaattacggtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGc > 1:618874‑M2/56‑250 (MQ=255) gcagcaaccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAc > 1:127641‑M2/47‑223 (MQ=255) accttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCAtgtg < 1:115923‑M2/211‑1 (MQ=255) accttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCAtgtg < 1:797600‑M2/211‑1 (MQ=255) ccttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATaa < 1:366629‑M2/120‑1 (MQ=255) cttaaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGcaccac < 1:897391‑M2/205‑1 (MQ=255) aaaagcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGccc < 1:530022‑M2/216‑1 (MQ=255) agcctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCAtgt > 1:246222‑M2/33‑242 (MQ=255) cctgaattacgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAc < 1:610940‑M2/177‑1 (MQ=255) acgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAAtt < 1:658073‑M2/122‑1 (MQ=255) acgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAat < 1:181142‑M2/166‑1 (MQ=255) acgtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGAt > 1:349224‑M2/23‑193 (MQ=255) acgtataaccatatatggctgtT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAatat < 1:445310‑M2/168‑1 (MQ=255) gtataaccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGc < 1:482943‑M2/188‑1 (MQ=255) accatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATaa < 1:383742‑M2/120‑1 (MQ=255) accatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTc < 1:780432‑M2/163‑1 (MQ=255) accatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCAtg < 1:637499‑M2/209‑1 (MQ=255) accatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGccc < 1:781562‑M2/216‑1 (MQ=255) accatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGttt > 1:591276‑M2/16‑250 (MQ=255) ccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAAc < 1:621619‑M2/177‑1 (MQ=255) ccatatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGttt > 1:411858‑M2/15‑249 (MQ=255) atatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAat > 1:336420‑M2/13‑178 (MQ=255) atatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAAc < 1:497351‑M2/192‑1 (MQ=255) atatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGcaccac < 1:348005‑M2/205‑1 (MQ=255) tatatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctctt > 1:139343‑M2/12‑251 (MQ=255) atatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGcaccac > 1:364300‑M2/11‑215 (MQ=255) atatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCAccacca < 1:192644‑M2/207‑1 (MQ=255) atatggctttT‑AATGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttg < 1:653899‑M2/241‑1 (MQ=255) ttaaTGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttgctcttgagc < 1:606047/249‑4 (MQ=255) taaTGGCAACTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttgctcttgagcc < 1:148120/250‑5 (MQ=255) caaCTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGccc > 1:645615/3‑210 (MQ=255) caaCTGAAGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttgctc > 1:817617/3‑238 (MQ=255) aGCAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGcaccac > 1:236684/1‑192 (MQ=255) cAAGAATGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTCTCTTGCTCTTGAGCCTCGCGCTCcaccac < 1:143813/250‑1 (MQ=255) tGCCCGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTCTCTTGCTCTTGAGCCTCGCGCTCCACCACTTGACga > 1:9290/1‑250 (MQ=255) cccGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTCTCTTGCTCTTGAGCCTCGCGCTCCACCACTTGACgac < 1:542021/250‑3 (MQ=255) cGTTTGACCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttgctc > 1:353159/1‑219 (MQ=255) aCCCTGTTTTTCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGAt > 1:172796/1‑140 (MQ=255) ctgtttttCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGcaccac < 1:169208/167‑1 (MQ=255) ttCCGAAATAGTTTTACACTTTCCGACTTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAAGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCGAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTctcttgctcttgagc > 1:808703/1‑207 (MQ=255) | AGGACGGATAACTGGGCTCAAATTGCGGATAAGGATAATAACCCGCGCAGGCGGTTAAAATAGAAATCGGTAAAACAAGTAAGTATTTTTTTAACATGATATTCC‑TT‑AGGTTGAAAATAGATGAATCATTGCCTCGCTGCAGCAACCTTAAAAGTCCGAATTACGTGTAACTATATATGATATGGCTTTAATATAAATGGCGACTGAAGCAAGAATGCCCGTTTGACCCTGATTTTCCGAAATAG‑TTTACGCATTCCGAATTTTTCTTACTTCTCGCTCAGATACGGATCGACAAAGCCAAGCCCTATCATAATTTGCGTTTCCAGGCTTTCCATTTCCTCCGCTTCGTCATCTTCAATATGATCATAACCAAGTAAATGCAAACTGCCGTGCACCACCATGTGTGCCCAATGCGCCATGAGCGGTTTCTCTTGCTCTTGGGCTTCGCGCTCCACCACTTGACGGC > 1/1476686‑1477151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |