| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,310,079 | (A)6→7 | intergenic (‑152/‑57) | unknown ← / → unknown | hypothetical protein/Putative transposase InsK for insertion sequence element IS150 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,310,073 | 1 | . | A | 100.0% | 205.6 / NA | 76 | intergenic (‑146/‑63) | unknown/unknown | hypothetical protein/Putative transposase InsK for insertion sequence element IS150 |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (53/23); total (53/23) | |||||||||||
TCAATATCCGCAACCACCTCACAGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACT‑AAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGAT > 1/1309830‑1310312 | tCAATATCCGCAACCACCTCACAGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACT‑aaaaaaa > 1:447029/1‑250 (MQ=255) cccTCACAGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATc < 1:76997/250‑1 (MQ=255) accTCACAGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATc < 1:184365/251‑1 (MQ=255) caGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGa > 1:278751/1‑243 (MQ=255) cTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATc > 1:541246/1‑206 (MQ=255) tgttAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGt > 1:552063/1‑251 (MQ=255) tAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAg > 1:610694/1‑216 (MQ=255) aaTTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATc > 1:226151/1‑168 (MQ=255) aaTTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCaa > 1:27906/1‑251 (MQ=255) tttACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAgg < 1:663462/206‑1 (MQ=255) ttACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGc < 1:528838/251‑1 (MQ=255) cTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATc < 1:712021/160‑1 (MQ=255) cTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACAC‑ACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAatat > 1:569940/1‑230 (MQ=255) cTCCTATTCAAAATTTACAAACTCGAGCAAGGGAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGt > 1:91128/1‑251 (MQ=255) tCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTg < 1:571074/251‑1 (MQ=255) aGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAgg < 1:102151/171‑1 (MQ=255) aGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTc < 1:237316/207‑1 (MQ=255) aGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTAc > 1:149863/1‑248 (MQ=255) aGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAg > 1:246083/1‑250 (MQ=255) aGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGATGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAg > 1:387880/1‑250 (MQ=255) ggTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCg > 1:586231/1‑251 (MQ=255) gTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAgg < 1:889627/169‑1 (MQ=255) gTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTAACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGCCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCgg > 1:569285/1‑251 (MQ=255) tAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCggg > 1:450820/1‑251 (MQ=255) acacAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTAc > 1:28049/1‑243 (MQ=255) cacaACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGAtt > 1:258195/1‑251 (MQ=255) cacaACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGAtt > 1:728977/1‑251 (MQ=255) aCTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATc < 1:390663/202‑1 (MQ=255) aCTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAg > 1:845552/1‑251 (MQ=255) aCTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGCTTGAAGGGAAAATGCAAACGGCGAAAat > 1:867329/1‑190 (MQ=255) aaaCACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAg < 1:453220/209‑1 (MQ=255) cacaACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGAt < 1:768850/208‑1 (MQ=255) cacaACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAAc > 1:856396/1‑249 (MQ=255) cacaACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAAc > 1:409662/1‑249 (MQ=255) caacaaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTGATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGa > 1:841622/1‑251 (MQ=255) caacaaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAg > 1:548232/1‑201 (MQ=255) caacaaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTAc > 1:874571/1‑220 (MQ=255) caacaaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGa < 1:286147/251‑1 (MQ=255) acaaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGaaa > 1:352224/1‑251 (MQ=255) caaTATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTAc < 1:566851/217‑1 (MQ=255) atatTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATgg > 1:642205/1‑251 (MQ=255) atTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGAt < 1:759135/194‑1 (MQ=255) atTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGt > 1:651281/1‑251 (MQ=255) gACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCg > 1:355972/1‑251 (MQ=255) aCTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGa > 1:836968/1‑251 (MQ=255) tataATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCCGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGAtg < 1:431182/251‑1 (MQ=255) ataATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACT‑aaaaaaag > 1:378690/1‑69 (MQ=255) aaTCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGa > 1:740175/1‑251 (MQ=255) aTCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGAt < 1:517067/251‑1 (MQ=255) aaaaTAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGa > 1:205138/1‑251 (MQ=255) aaaTAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGt > 1:194409/1‑93 (MQ=255) aaaTAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATcc > 1:831716/1‑104 (MQ=255) acacAATAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTaaa > 1:14233/1‑251 (MQ=255) acacAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATc > 1:710028/1‑104 (MQ=255) acacAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTg > 1:267614/1‑204 (MQ=255) acacAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTaaa > 1:349918/1‑251 (MQ=255) acacAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTaaa > 1:648714/1‑251 (MQ=255) cacaAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAAt > 1:457494/1‑251 (MQ=255) caAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATg > 1:94888/1‑250 (MQ=255) gTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATg < 1:849513/218‑1 (MQ=255) ttACGAGCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAACAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGAt > 1:418223/1‑154 (MQ=255) gCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTa > 1:228428/1‑251 (MQ=255) gCCACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTa > 1:248074/1‑251 (MQ=255) ccACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTAttt < 1:237198/249‑1 (MQ=255) ccACACATACCAACTGGTAGATACTAAAAAAAGAGAGGATTATGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTAttt < 1:348816/249‑1 (MQ=255) acacaTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGaaaaa > 1:87313/1‑197 (MQ=255) acacaTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGATTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCa > 1:483326/1‑251 (MQ=255) cacaTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGAtg < 1:361983/209‑1 (MQ=255) cacaTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCa > 1:329023/1‑250 (MQ=255) cacaTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCAc < 1:410075/251‑1 (MQ=255) caTACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCAc < 1:363459/249‑1 (MQ=255) tACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTa > 1:471476/1‑243 (MQ=255) tACCAACTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAAt > 1:519863/1‑251 (MQ=255) aaCTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTaaa > 1:320609/1‑251 (MQ=255) cTGGTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGa > 1:415919/1‑251 (MQ=255) ggTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGAt > 1:370629/1‑250 (MQ=255) ggTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGAt > 1:306610/1‑250 (MQ=255) ggTAGATACTAAAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGAt > 1:112879/1‑250 (MQ=255) | TCAATATCCGCAACCACCTCACAGACAATGTCCGTTAAAACCACATAATCTTTTTTCAAACTTTCAACCATTTGGGCTTTTCTTTCTGTTGTTAGCATAATTTACACTCCTATTCAAAATTTACAAACTCGAGCAAGGTAACACAACTATAATCAAAACACAACAACAATATATTTTGACTATAATCAAAATAAACACAAGAGTTTTGACATTTACGAGCCACACATACCAACTGGTAGATACT‑AAAAAAGAGAGGATTCTGATCTGCCCACCAAAAAGTTGGACTAATCCTCAATCTACTAAGGTTTGAAGGGAAAATGCAAACGGCGAAAATATCGTTCTTATCAAGGCGAAGTCGGTAAGATTGCAGACAATCTGTTACAGCGGGATTTTAGTGCGACGAAACCTAATGAAAAATGGGTCACCGATGTGATTGAATTTAAATGCGATGAAGGCAAGCTCTATTTATCACCAATTAAAGAT > 1/1309830‑1310312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |