| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 453,072 | (T)6→5 | intergenic (+39/‑87) | unknown → / → unknown | 2‑oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)/Dihydrolipoamide succinyltransferase component (E2) of 2‑oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 453,067 | 0 | T | . | 100.0% | 290.2 / NA | 69 | intergenic (+34/‑92) | unknown/unknown | 2‑oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)/Dihydrolipoamide succinyltransferase component (E2) of 2‑oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (42/27); total (42/27) | |||||||||||
GCCTTATGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGTTTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAGTGCCGGCAC > 1/452817‑453309 | gcCTTATGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGt > 1:623813/1‑251 (MQ=255) ccTTATGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGtt > 1:519039/1‑251 (MQ=255) cTTATGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGttt > 1:5640/1‑251 (MQ=255) aTGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGtttttg > 1:96359/1‑250 (MQ=255) gATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAAcg > 1:20249/1‑250 (MQ=255) gtgtCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGTAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAaccg > 1:328183/1‑251 (MQ=255) gtgtCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAaccg > 1:878637/1‑251 (MQ=255) gAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCaaa > 1:409716/1‑251 (MQ=255) aCCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAat > 1:178367/1‑251 (MQ=255) aGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATaa > 1:299560/1‑251 (MQ=255) cgcgTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc < 1:95029/251‑1 (MQ=255) cgcgTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc < 1:536767/251‑1 (MQ=255) cgcgTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGG‑CGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc < 1:116536/250‑1 (MQ=255) cgTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACtt > 1:537398/1‑251 (MQ=255) gTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCG‑AAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc > 1:724255/1‑244 (MQ=255) ccAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACg < 1:150456/251‑1 (MQ=255) aaTTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAg < 1:129762/251‑1 (MQ=255) cGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACa < 1:240576/250‑1 (MQ=255) gTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc < 1:18607/217‑1 (MQ=255) aTTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAAc < 1:880979/244‑1 (MQ=255) aTTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGa > 1:531499/1‑251 (MQ=255) aTTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGa < 1:391309/251‑1 (MQ=255) cGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTc < 1:333786/250‑1 (MQ=255) aaaTTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAAc < 1:882006/229‑1 (MQ=255) aaaTTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTg > 1:19079/1‑251 (MQ=255) aTGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACg > 1:271187/1‑200 (MQ=255) cGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAAt > 1:497176/1‑251 (MQ=255) tgcctctCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGAt < 1:876839/251‑1 (MQ=255) ctcCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc < 1:488213/165‑1 (MQ=255) ctcCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGa > 1:39338/1‑202 (MQ=255) ctcCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCa > 1:878674/1‑250 (MQ=255) ccAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCg < 1:72451/251‑1 (MQ=255) gCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAgg > 1:733834/1‑176 (MQ=255) gCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTg > 1:50309/1‑251 (MQ=255) cTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTgg > 1:348079/1‑251 (MQ=255) cTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTgg > 1:814023/1‑251 (MQ=255) atatatCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAATATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGca > 1:333753/1‑251 (MQ=255) atatatCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACa > 1:470706/1‑181 (MQ=255) atatatCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGa > 1:211396/1‑187 (MQ=255) atatatCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGca > 1:147609/1‑251 (MQ=255) atatCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGcaca > 1:164823/1‑251 (MQ=255) tCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACaaaa > 1:604656/1‑251 (MQ=255) cacCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCggg > 1:134758/1‑250 (MQ=255) aaaCAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACg > 1:105717/1‑251 (MQ=255) caaAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGa < 1:201517/251‑1 (MQ=255) aCAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGt < 1:519251/251‑1 (MQ=255) ggtggAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGaa > 1:685867/1‑251 (MQ=255) gtggAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGa > 1:225303/1‑239 (MQ=255) tggAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAg < 1:774694/250‑1 (MQ=255) ggAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGAc < 1:375990/151‑1 (MQ=255) cgTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGAc > 1:293696/1‑105 (MQ=255) cgTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGa > 1:548052/1‑251 (MQ=255) cacGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCga > 1:435497/1‑251 (MQ=255) acGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCgag > 1:424192/1‑251 (MQ=255) cGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGa > 1:94793/1‑221 (MQ=255) cGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCgaga > 1:549149/1‑251 (MQ=255) aGGCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACaaa > 1:130908/1‑251 (MQ=255) ggCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATc > 1:410396/1‑159 (MQ=255) ggCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCg < 1:796503/239‑1 (MQ=255) ggCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAg > 1:533337/1‑251 (MQ=255) gCGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACaaaaa < 1:377958/194‑1 (MQ=255) cGATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAgt < 1:644314/250‑1 (MQ=255) gATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACa > 1:452226/1‑116 (MQ=255) gATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAg < 1:58771/221‑1 (MQ=255) gATAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAgtgg > 1:888817/1‑251 (MQ=255) aTAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGt > 1:423177/1‑213 (MQ=255) aTAAAGTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAgtgg < 1:288965/250‑1 (MQ=255) gTGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGc > 1:239794/1‑198 (MQ=255) tGCGGTGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCtt < 1:578085/249‑1 (MQ=255) cgatGATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAGCATAAAAAGGAATAAACAGTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCGCCGTGGCAACTTGGCACAAAAAAGCTGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAg < 1:318995/248‑1 (MQ=255) gATTTTTCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAGTGc > 1:759373/1‑250 (MQ=255) ttCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAGTGCCGGcac < 1:438553/251‑1 (MQ=255) ttCACAGCG‑TTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAGTGCCGGcac < 1:208208/251‑1 (MQ=255) | GCCTTATGCTCATGTGACGGATTTTGTGTGGTGTCAGGAAGAACCGCTGAACCAAGGCGCGTGGTATTCCAGCAAACACAATTTTGAAGCGGTTATTCCGGAAGGGGCGAAATTAACCTATGCCGGTCGCCCGGCCTCTGCCTCTCCAGCGGTGGGCTATATATCATTGCACACCAAACAACAAAAACAATTGGTGGAAGACGCGTTAACACGTTAATGAGGCGATAAAGTGCGGTGATTTTTCACAGCGTTTTTTGTGCGAAAAAAACGCGGCGAAAACCGACCGCACTTTTCATCAAAATATAAGACTTAGCTAAACGAACATAAAAAGGAATAAACATTATGACGATTGAAATTCTTGTCCCCGATTTACCCGAATCCGTAGCCGATGCCACCGTGGCAACTTGGCACAAAAAAGCGGGCGACGCAGTGAAACGTGATGAAGTGATTGTGGAAATCGAGACCGACAAAGTGGTGCTTGAAGTGCCGGCAC > 1/452817‑453309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |