| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,320,484 | Δ1 bp | intergenic (‑137/+3) | unknown ← / ← unknown | Peptide chain release factor 1/Outer membrane lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,320,484 | 0 | C | . | 98.2% | 219.3 / ‑3.6 | 55 | intergenic (‑137/+3) | unknown/unknown | Peptide chain release factor 1/Outer membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (27/27); total (27/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCTGATCGCTAATCACGGAAGCATCGCCTAACAAGGCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAGCACCTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCGATTGCAGAT > 1/1320250‑1320724 | tCCTGATCGCTAATCACGGAAGCATCGCCTAACAAGGCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGaaa < 1:232685/250‑1 (MQ=255) aaTCACGGAAGCATCGCCTAACAAGGCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTg > 1:561498/1‑251 (MQ=255) aaCAAGGCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTAc < 1:170925/251‑1 (MQ=255) gCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCcgcg < 1:19057/250‑1 (MQ=255) aTAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGt < 1:425716/251‑1 (MQ=255) ttCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGt < 1:502983/250‑1 (MQ=255) cTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCaaa < 1:99818/200‑1 (MQ=255) aTCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCa > 1:496284/1‑251 (MQ=255) aTCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCa > 1:301990/1‑251 (MQ=255) aTCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCa > 1:113142/1‑251 (MQ=255) aaTTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTaa > 1:295844/1‑227 (MQ=255) ttGATAATAGAGGGTTTCATTATTTGACATTCGGAAGGAAAATAGAAAAGGAAATAAAAACATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTCCGGATTTGGCCAAAAGCCTTTTAGGAATAGGTAG‑TCTTAAAGTGCAGACACGTTCaaa > 1:700165/1‑180 (MQ=255) taataGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACg < 1:587623/178‑1 (MQ=255) taataGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAAttt > 1:847828/1‑249 (MQ=255) taataGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACATTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAAttt > 1:432277/1‑249 (MQ=255) ggTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACg > 1:863108/1‑188 (MQ=255) ttattTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGaaa < 1:77479/153‑1 (MQ=255) aGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGaaa < 1:285279/137‑1 (MQ=255) ggAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAAtt < 1:869322/216‑1 (MQ=255) ggAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCaa > 1:383421/1‑251 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGaaa > 1:14240/1‑102 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGaaa > 1:288734/1‑102 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGc < 1:206220/170‑1 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGa > 1:84970/1‑204 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTa > 1:464699/1‑251 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTa > 1:56985/1‑251 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTa > 1:657096/1‑251 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTa > 1:124417/1‑251 (MQ=255) ttCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTa > 1:221217/1‑251 (MQ=255) tCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTAc < 1:307589/251‑1 (MQ=255) tAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTg < 1:694238/251‑1 (MQ=255) gAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGtt > 1:602022/1‑144 (MQ=255) gAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTaa > 1:105733/1‑251 (MQ=255) aaTGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAAc < 1:108684/251‑1 (MQ=255) aTGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCg > 1:84702/1‑251 (MQ=255) tgttgtTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCAc < 1:362026/248‑1 (MQ=255) aGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCt > 1:470418/1‑250 (MQ=255) gTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAAc > 1:306453/1‑233 (MQ=255) tAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAAc < 1:571331/251‑1 (MQ=255) gATTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTAcc < 1:582851/250‑1 (MQ=255) aTTTCGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTg < 1:573893/251‑1 (MQ=255) cGCCAAAAGCTTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTCTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTacc < 1:178385/251‑1 (MQ=255) cGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTacc < 1:573050/251‑1 (MQ=255) cGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTacc < 1:892170/251‑1 (MQ=255) cGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTacc < 1:501794/251‑1 (MQ=255) cGCCAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTacc < 1:303959/251‑1 (MQ=255) ccAAAATCCTTTTAGGAATAGGTAGC‑CTTAAAGTGCAGAAACTTTCAACCGTGAACCGCCGACGATACGTACCCGCGCACCTGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTaccac < 1:452355/251‑1 (MQ=255) ccAAAAGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTaccac < 1:531662/251‑1 (MQ=255) aaaGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTaccaccac < 1:385285/251‑1 (MQ=255) aaaGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTaccaccac < 1:55085/251‑1 (MQ=255) aGCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCg > 1:126575/1‑251 (MQ=255) gCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCGa > 1:827675/1‑251 (MQ=255) gCCTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCGa > 1:548659/1‑251 (MQ=255) ccTTTTAGGAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCg < 1:11264/249‑1 (MQ=255) gAATAGGTAG‑ACTTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCGATTGCAGAt > 1:347780/1‑250 (MQ=255) | TCCTGATCGCTAATCACGGAAGCATCGCCTAACAAGGCTTCCAGCTCTTCATAACGTTCTTTTAAGCTATCTAATTTATTGATAATAGAGGGTTTCATTATTTGACCTTCAGAAGGAAAATAGAAAAGGAAATAAAAAAATCGGAGCATTCTAGCACAGAATGAAAATGTTGTTGAAGTTTAGGCTGTAAAAAAGGCTTTCGGATTTCGCCAAAAGCCTTTTAGGAATAGGTAGCACCTAAAGTGCAGAAACGTTCAAACGTGAACCGCCGACGATACGTACCCGCGCACCCGGCACTAAGTTAGGTTCGGCTTTTTGCACTACAACAATTTCTTTTCCGTCATCTTTTTTGATTACCATTTCCAAGGCGCTAACTTGGCTGACTTTTTCTTCAACCTTACTGCCGGTAACTGCACCGGCAATTGCTCCAACAGCCGTTGCAAGCGCTCTACCTGTACCACCACCGATTGCAGAT > 1/1320250‑1320724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |