| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,118,577 | (C)8→7 | intergenic (‑301/‑227) | unknown ← / → unknown | hypothetical protein/Oxaloacetate decarboxylase Na(+) pump, gamma chain (EC 4.1.1.3) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,118,570 | 0 | C | . | 100.0% | 219.9 / NA | 52 | intergenic (‑294/‑234) | unknown/unknown | hypothetical protein/Oxaloacetate decarboxylase Na(+) pump, gamma chain (EC 4.1.1.3) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (25/27); total (25/27) | |||||||||||
CACGTAATTTAGCCCGATCTTTAACAAATCCATTATGTATATCGGAATACTCTGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGCCCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAAACACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCAAAAATATGAGGAAACGAC > 1/1118325‑1118801 | cACGTAATTTAGCCCGATCTTTAACAAATCCATTATGTATATCGGAATACTCTGTTGGATTTTGCAATACACGAGAGACAACACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGcccccc < 1:445278/251‑1 (MQ=255) aTCTTTAACAAATCCATTATGTATATCGGAATACTCTGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCg < 1:270466/250‑1 (MQ=255) tGTATATCGGAATACTCTGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACtttttt < 1:288269/251‑1 (MQ=255) aCTCTGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAata < 1:655036/251‑1 (MQ=255) ctGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAatatat > 1:779965/1‑251 (MQ=255) aCTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATGCATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTgcgc < 1:324539/251‑1 (MQ=255) aCTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTgcgc < 1:353718/251‑1 (MQ=255) tAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGTAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTAt < 1:295618/251‑1 (MQ=255) cAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGttt > 1:499253/1‑251 (MQ=255) gtgtAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGccccccc < 1:389925/147‑1 (MQ=255) gtAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGccc < 1:140679/141‑1 (MQ=255) ccATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTaaaaaacc < 1:816072/250‑3 (MQ=255) atcatATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAAccac > 1:831618/1‑250 (MQ=255) catATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCg > 1:682604/1‑250 (MQ=255) atatatAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGc > 1:73061/1‑130 (MQ=255) atatatAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCa > 1:639762/1‑251 (MQ=255) atatatAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCa > 1:399492/1‑251 (MQ=255) tatataACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTc < 1:776805/191‑1 (MQ=255) atataACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGa < 1:166582/204‑1 (MQ=255) ccTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTgc > 1:566888/1‑207 (MQ=255) ccTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCAc > 1:573002/1‑244 (MQ=255) gTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGCGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAg > 1:848668/1‑250 (MQ=255) cTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGttt > 1:815794/1‑208 (MQ=255) tACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCa < 1:393869/250‑1 (MQ=255) cGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCg > 1:218178/1‑193 (MQ=255) gagaTACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAgtg < 1:410264/169‑1 (MQ=255) gaTACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTTCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACaa < 1:159272/145‑1 (MQ=255) aCATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAatatatat > 1:661464/1‑150 (MQ=255) aCATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGa > 1:761663/1‑251 (MQ=255) aCATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGa < 1:225448/251‑1 (MQ=255) catcatATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTaaaaaac > 1:164730/1‑204 (MQ=255) tcatATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGAc < 1:577524/166‑1 (MQ=255) atatTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAg > 1:21931/1‑157 (MQ=255) atatTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCa > 1:35251/1‑230 (MQ=255) atatTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCa > 1:865358/1‑251 (MQ=255) aTTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACgg < 1:312404/251‑1 (MQ=255) gAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCg > 1:236470/1‑169 (MQ=255) aCAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGcc < 1:190765/207‑1 (MQ=255) cAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGa > 1:41259/1‑251 (MQ=255) aaaTTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGAc > 1:404215/1‑136 (MQ=255) aaaTTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCa < 1:798919/202‑1 (MQ=255) aaaTTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCg > 1:346012/1‑249 (MQ=255) aaaTTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCt < 1:289450/251‑1 (MQ=255) aaaTTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGAGCGCTATCGTTTAAAATTCATCGTAAACAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCg > 1:450298/1‑249 (MQ=255) gTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCAt < 1:315774/190‑1 (MQ=255) ttttttATTAATATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTc < 1:71253/249‑1 (MQ=255) aaTATATTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACt < 1:722957/65‑1 (MQ=255) atatatTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCTCAAGTGTGGCCGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGAtc < 1:33476/196‑1 (MQ=255) atatatTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCaaaaa > 1:766417/1‑251 (MQ=255) atatatTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCaaaaa > 1:36883/1‑251 (MQ=255) atTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTAttt < 1:885491/75‑1 (MQ=255) atTTTTATGTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGcc < 1:594811/163‑1 (MQ=255) gTAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCAAAAATATGAGGAAACg > 1:197392/1‑251 (MQ=255) tAATTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCAAAAATATGAGGAAACg < 1:666242/250‑1 (MQ=255) aaTTAGGAAATTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCAAAAATATGAGGAAACGAc < 1:638546/251‑1 (MQ=255) aTTTCCCATAG‑CCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAACCACCGCACTTTCCACGCCCAGCCGTAc < 1:294406/153‑1 (MQ=255) | CACGTAATTTAGCCCGATCTTTAACAAATCCATTATGTATATCGGAATACTCTGTTGGATTTTGCAATACACGAGAGACAATACTTAAATCAACTAAACGTTTCAGTGTAGCCATCATATATAACCTCCAAGTCTTTAGTACAACCGTTGAGATACATCATATTACATTGAACAAAAAGTACAGTCAAAATTATAGAACAGTTTTTTATTAATATATTTTTATGTAATTAGGAAATTTCCCATAGCCCCCCCCTGCTGACGCAAGCGTTTTTCACTTGTACTTTTTTATTTCTACAAATATATATTTTCAGCACAAGTGTGGACGCTTGTGCGCTATCGTTTAAAATTCATCGTAAAAAAACACCGCACTTTCCACGCCCAGCCGTACCATCGGCGTAAATTATGATCTCAATCACGGTTTTGATGGAGTGAATCCGCTAGAATGAAACTCCCATTTCAAAAATATGAGGAAACGAC > 1/1118325‑1118801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |