Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,817,147	2 bp→GA	intergenic (+35247/+18236)	unknown → / ← unknown	tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,817,147	0	C	G	100.0%	115.1 / NA	40	intergenic (+35247/+18237)	unknown/unknown	tRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (21/19);  total (21/19)
*	1	1,817,148	0	G	A	100.0%	110.9 / NA	40	intergenic (+35248/+18236)	unknown/unknown	tRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (21/19);  total (21/19)

CGAAAAACCGAAATATTTCTTCCTAGAACGCTATATGCAATCTTTCGCCGATGAAATGGCGTGCTTTGTGGATTCCGTAGTAAACGACAAACCGACTTTAGTCAACGGCAACGACGGCTTGCAACCTGTGCTGATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑AAAGCATTTTCTGATGCT‑AAAAAAGACCTGAAACCGATTCAGGTCTTTTGTTTTTCGG‑TGATTAGAAAACACTTGAATTTTTGACCGCACTTTTGCCCCGAAAACCTACAACGGGCTTTCCACTTGCAGGCGTTCGCAAATGCCGGTAATGCGCTTTCAATTATAAATCCATCATC  >  1/1816916‑1817288                                                                                                                                                                                                                                          ||                                                                                                                                              cGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGttt                                                                                                                              <  1:858422/251‑1 (MQ=255)              tatTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaa                                                                                                                 >  1:539021/1‑243 (MQ=255)                     tcCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaaaaaaca                                                                                                           >  1:485296/1‑236 (MQ=255)                              gCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAtttt                                                                                                 >  1:496082/1‑251 (MQ=255)                              gCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAtttt                                                                                                 >  1:418922/1‑251 (MQ=255)                                                          ggCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACa                                                                    >  1:894462/1‑251 (MQ=255)                                                               gCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg                                                               >  1:245466/1‑251 (MQ=255)                                                                cTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg                                                               <  1:803288/250‑1 (MQ=255)                                                                cTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGc                                                              <  1:296894/251‑1 (MQ=255)                                                                  ttGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg                                                               <  1:707937/248‑1 (MQ=255)                                                                    gtgGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCttt                                                           >  1:230784/1‑250 (MQ=255)                                                                      ggATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaaaaaac                                                                                                            <  1:435423/200‑14 (MQ=255)                                                                       gATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcgg                                                        <  1:568767/250‑3 (MQ=255)                                                                        aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAt                                                                                                    >  1:785189/1‑206 (MQ=255)                                                                        aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtt                                                      >  1:27254/1‑247 (MQ=255)                                                                        aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtt                                                      >  1:679263/1‑247 (MQ=255)                                                                           ccGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttg                                                    >  1:312966/1‑244 (MQ=255)                                                                             gtagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcag                                                 >  1:28084/1‑242 (MQ=255)                                                                              tagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcagg                                                <  1:816868/251‑11 (MQ=255)                                                                              tagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcagg                                                <  1:569377/251‑11 (MQ=255)                                                                                 tgaaCGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCg                                              <  1:384749/248‑1 (MQ=255)                                                                                               aCTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGt                               >  1:881958/1‑251 (MQ=255)                                                                                                 tttAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTaa                             <  1:325185/251‑1 (MQ=255)                                                                                                     gTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggg                         >  1:612072/1‑249 (MQ=255)                                                                                                      tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtg                        <  1:861517/251‑4 (MQ=255)                                                                                                      tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtg                        <  1:891276/251‑4 (MQ=255)                                                                                                      tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATgg                          <  1:778134/249‑2 (MQ=255)                                                                                                         aCGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgaga                     <  1:603299/251‑7 (MQ=255)                                                                                                          cGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaa                    <  1:620902/251‑8 (MQ=255)                                                                                                          cGGCAACGACGGTTTGCAACATGTGCTTATCGCGTTGGCGAGAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCAGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACTCTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaa                    <  1:452723/251‑8 (MQ=255)                                                                                                           ggCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaat                   >  1:165049/1‑243 (MQ=255)                                                                                                                     gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgca                                                  >  1:56981/3‑202 (MQ=255)                                                                                                                     gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag         >  1:52282/3‑233 (MQ=255)                                                                                                                     gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCCACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag         >  1:55082/3‑233 (MQ=255)                                                                                                                      tttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag         <  1:375722/249‑19 (MQ=255)                                                                                                                             ccTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggagcggataa  >  1:799382/1‑225 (MQ=255)                                                                                                                             ccTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggagcggataa  >  1:332391/1‑225 (MQ=255)                                                                                                                                                 ggcAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTAc                                                                     <  1:615349/163‑1 (MQ=255)                                                                                                                                                       aCGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATg                                    >  1:258650/1‑190 (MQ=255)                                                                                                                                                                 gatgaAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAAt                            <  1:260690/188‑1 (MQ=255)                                                                                                                                                                                                                                          ||                                                                                                                                              CGAAAAACCGAAATATTTCTTCCTAGAACGCTATATGCAATCTTTCGCCGATGAAATGGCGTGCTTTGTGGATTCCGTAGTAAACGACAAACCGACTTTAGTCAACGGCAACGACGGCTTGCAACCTGTGCTGATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑AAAGCATTTTCTGATGCT‑AAAAAAGACCTGAAACCGATTCAGGTCTTTTGTTTTTCGG‑TGATTAGAAAACACTTGAATTTTTGACCGCACTTTTGCCCCGAAAACCTACAACGGGCTTTCCACTTGCAGGCGTTCGCAAATGCCGGTAATGCGCTTTCAATTATAAATCCATCATC  >  1/1816916‑1817288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑