| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 167,119 | 2 bp→CG | intergenic (‑31668/+46577) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 167,119 | 0 | T | C | 100.0% | 227.7 / NA | 77 | intergenic (‑31668/+46578) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (48/29); total (48/29) | |||||||||||
| * | 1 | 167,120 | 0 | A | G | 100.0% | 219.4 / NA | 77 | intergenic (‑31669/+46577) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (48/29); total (48/29) | |||||||||||
ACGAACCTGTTGGAAAATGGGTTCTGTTTTCATGAATAATTTGACCTTTATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGTATGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCTTTTTTAGAT > 1/166880‑167362 || aCGAACCTGTTGGAAAATGGGTTCTGTTTTCATGAATAATTTGACCTTTATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCtt < 1:271090/251‑1 (MQ=255) ccTGTTGGAAAATGGGTTCTGTTTTCATGAATAATTTGACCTTTATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATg < 1:290247/251‑1 (MQ=255) gACCTTTATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGAc > 1:497464/1‑246 (MQ=255) ttATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCCCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGt > 1:233088/1‑250 (MQ=255) ggTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCCCTGCGTCAACCa > 1:294342/1‑251 (MQ=255) cTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGt < 1:107163/240‑1 (MQ=255) cTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGa > 1:50168/1‑251 (MQ=255) gCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAattattatt > 1:718998/1‑251 (MQ=255) aTTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGcc > 1:432078/1‑184 (MQ=255) aTTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAattattat < 1:714992/247‑1 (MQ=255) tttGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTcc > 1:379667/1‑250 (MQ=255) tttGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTcc > 1:631966/1‑250 (MQ=255) ttGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCcg > 1:495632/1‑251 (MQ=255) cTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGcgccaa > 1:217863/1‑251 (MQ=255) ccATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGaa > 1:15716/1‑214 (MQ=255) ccATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGa > 1:332158/1‑251 (MQ=255) ccATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGa > 1:277229/1‑251 (MQ=255) ccATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGa > 1:767154/1‑251 (MQ=255) aTTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAAcc < 1:177239/205‑1 (MQ=255) aTTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGaa < 1:746831/212‑1 (MQ=255) aTTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGAtt > 1:804485/1‑251 (MQ=255) aTTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGAtt > 1:489648/1‑251 (MQ=255) aTTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGAtt > 1:93666/1‑251 (MQ=255) aaaTAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAattattat > 1:225221/1‑226 (MQ=255) aaaTAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCaa > 1:185407/1‑251 (MQ=255) cttctAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCTGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCa > 1:837826/1‑251 (MQ=255) cttctAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCa > 1:170007/1‑251 (MQ=255) gggTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAAttt > 1:398818/1‑250 (MQ=255) aaaaTAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGaaa > 1:543739/1‑196 (MQ=255) cTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGa < 1:49201/251‑1 (MQ=255) aaaGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATg < 1:522564/251‑1 (MQ=255) gCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATg < 1:82499/120‑1 (MQ=255) gCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAAt > 1:283119/1‑251 (MQ=255) aTTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAg > 1:686641/1‑251 (MQ=255) tCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGcc < 1:339520/251‑1 (MQ=255) gTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGaa > 1:21375/1‑160 (MQ=255) ttCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAgg > 1:798780/1‑251 (MQ=255) ttttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTAt < 1:610720/251‑1 (MQ=255) tttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc < 1:535727/251‑1 (MQ=255) tttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc < 1:754402/251‑1 (MQ=255) tttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc < 1:521882/251‑1 (MQ=255) tttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc < 1:500498/251‑1 (MQ=255) ttGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCa < 1:812450/251‑1 (MQ=255) gATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCa > 1:771310/1‑251 (MQ=255) aTTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCa > 1:389085/1‑250 (MQ=255) ttATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGaa < 1:515582/143‑1 (MQ=255) ttATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAg > 1:857228/1‑234 (MQ=255) ttATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACg > 1:273782/1‑251 (MQ=255) tGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCAt < 1:528385/251‑1 (MQ=255) gCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCa < 1:167780/249‑1 (MQ=255) gCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATa > 1:466572/1‑251 (MQ=255) aCTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGAc < 1:646309/115‑1 (MQ=255) aCTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGAc < 1:399261/115‑1 (MQ=255) aTTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCa > 1:756426/1‑250 (MQ=255) aTTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCa > 1:308649/1‑250 (MQ=255) aTTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCa > 1:620829/1‑250 (MQ=255) tGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCacaac < 1:139565/251‑1 (MQ=255) gCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCa > 1:509404/1‑219 (MQ=255) gCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCAcaacaa > 1:173460/1‑245 (MQ=255) aCGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCg < 1:318591/251‑1 (MQ=255) aTCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAAc > 1:400998/1‑169 (MQ=255) aTCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCa < 1:55664/214‑1 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGt < 1:383028/110‑1 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGa > 1:237817/1‑180 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATc > 1:595073/1‑186 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc < 1:363485/207‑1 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATc > 1:153361/1‑207 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTAt > 1:377462/1‑251 (MQ=255) tCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTAt > 1:398342/1‑251 (MQ=255) ccccAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCAt > 1:153106/1‑101 (MQ=255) ccccAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTcaccac < 1:427807/233‑1 (MQ=255) ccccAAACCGGGCGAAATTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTAt > 1:354049/1‑250 (MQ=255) aaaTTTCCCTCGCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATc > 1:372915/1‑250 (MQ=255) gCTCACAATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCtttttt > 1:204024/1‑251 (MQ=255) cacaATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGccc > 1:306736/1‑242 (MQ=255) acaATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCTTTTTTAGAt < 1:163917/251‑1 (MQ=255) acaATGGCGTGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCTTTTTTAGAt < 1:543933/251‑1 (MQ=255) || ACGAACCTGTTGGAAAATGGGTTCTGTTTTCATGAATAATTTGACCTTTATTGGTATCTTTTAATATATTTTGACAGCTATTTGTAGCTTTTGTGCCATTAAATAGTATCTTCTAAGGGTAAAAAAATAGGCTAAAGCCTTATTCTATCGTTCTAAGTTTTGCCGATTATGCCACTTATTTGTAACTTTGACAGCGGCACGATCCCCAAACCGGGCGAAATTTCCCTCGCTCACAATGGTATGCTTTTCTTAGATGAGTTGCCCGAATTTGAACGCAAAGTGCTGGACGCGCTGCGTCAACCATTGGAAAGTGGCGAAATTATTATTTCCCGCGCCAACGCCAAGATTCAATTTCCGGCAAAATTTCAACTGATTGCCGCGATGAATCCCAGCCCGACAGGGCATTATCAAGGCACGCATAATCGCACCTCACCACAACAAGTTATGCGTTATCTGAATCGGTTATCCGGCCCTTTTTTAGAT > 1/166880‑167362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |