| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 908,454 | C→G | intergenic (+6344/+16188) | unknown → / ← unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 908,454 | 0 | C | G | 100.0% | 185.6 / NA | 62 | intergenic (+6344/+16188) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (36/26); total (36/26) | |||||||||||
GCACTATTGCACAAATACTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGCGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGATTTGCCTTTGCTGGAA > 1/908219‑908698 | gcactattgcacAAATACTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTc > 1:847214/1‑250 (MQ=255) gcacAAATACTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCgg > 1:761262/1‑251 (MQ=255) caAATACTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGAtt < 1:817119/251‑1 (MQ=255) aCTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATcc < 1:721501/251‑1 (MQ=255) aaTGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTccc > 1:750100/1‑250 (MQ=255) aaTGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTccc > 1:766553/1‑250 (MQ=255) aaaCCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTc > 1:598467/1‑243 (MQ=255) gCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTatg > 1:810903/1‑251 (MQ=255) tGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAAtct > 1:745787/1‑250 (MQ=255) aaaGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGc < 1:31252/251‑1 (MQ=255) aaaCGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCgc < 1:193988/251‑1 (MQ=255) tCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGttt > 1:705659/1‑251 (MQ=255) cgGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGc < 1:748999/251‑1 (MQ=255) ggATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGc > 1:44742/1‑250 (MQ=255) aGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAAt > 1:13763/1‑251 (MQ=255) aGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAAt > 1:208809/1‑251 (MQ=255) gACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAAt > 1:362357/1‑250 (MQ=255) cACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTAcc < 1:2111/250‑1 (MQ=255) cTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTcc > 1:368962/1‑160 (MQ=255) cTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGc > 1:779874/1‑200 (MQ=255) aCGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCCCCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAgtg < 1:299655/251‑1 (MQ=255) aCGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAgtg > 1:581315/1‑251 (MQ=255) gCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTa < 1:706827/187‑1 (MQ=255) ttGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAg > 1:736783/1‑250 (MQ=255) gACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGc < 1:663876/184‑1 (MQ=255) gggTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGa > 1:794824/1‑249 (MQ=255) gggTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGa > 1:628848/1‑249 (MQ=255) ggTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTatgat < 1:394724/176‑1 (MQ=255) ttGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTgg < 1:60422/250‑1 (MQ=255) gCTTTTATCCCCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATc < 1:338660/241‑1 (MQ=255) gCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAg < 1:96702/209‑1 (MQ=255) gtgtataagagacggttattaACCAATTGTTACATATCAGGCGCGTGGATAATAGCCTTCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTc < 1:575867/235‑1 (MQ=255) cTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTc < 1:401636/250‑1 (MQ=255) tATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCggg > 1:624671/1‑249 (MQ=255) ccAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTg < 1:491022/251‑1 (MQ=255) ccTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAg < 1:454125/192‑1 (MQ=255) ccAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAg < 1:416314/251‑1 (MQ=255) cAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGa > 1:17289/1‑251 (MQ=255) aaTTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAg > 1:878265/1‑223 (MQ=255) aTTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATcc > 1:272459/1‑106 (MQ=255) gTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTc > 1:466942/1‑222 (MQ=255) cATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCa > 1:849554/1‑250 (MQ=255) tCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTg < 1:502708/251‑1 (MQ=255) tCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATc < 1:648826/251‑1 (MQ=255) cgcgTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGCTTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTCTTg > 1:706121/1‑219 (MQ=255) cgcgTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTAt > 1:354760/1‑249 (MQ=255) gTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATc > 1:461813/1‑247 (MQ=255) gATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAAtct > 1:351144/1‑113 (MQ=255) gATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAg < 1:357750/161‑1 (MQ=255) gATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAg < 1:675137/161‑1 (MQ=255) gATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGatat > 1:640363/1‑251 (MQ=255) gCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAg > 1:560049/1‑154 (MQ=255) gCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGa > 1:655049/1‑250 (MQ=255) ccATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGAc < 1:215456/250‑1 (MQ=255) ctctTTGATGCGGCGCGGCGGCGCTGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCtt > 1:865553/1‑191 (MQ=255) ctTTGATGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTc < 1:508130/47‑1 (MQ=255) aTGCGGCGCGGCGGCGCGGGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATc > 1:684154/1‑219 (MQ=255) cgcggcggcgcggGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGa < 1:9495/250‑1 (MQ=255) cgcggcggcgcggGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGAt < 1:575287/251‑1 (MQ=255) gcgcggGATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGATTTGCCtt > 1:159225/1‑251 (MQ=255) ggATTATTGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGt > 1:624317/1‑178 (MQ=255) ttattGGGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGATTTGCCTTTGCTGGaa > 1:62210/1‑251 (MQ=255) | GCACTATTGCACAAATACTGAAGAATGAAAACCATGCTAAATCATTTGCAAAAAGAATTAAACGATCTGGTTAATCGCGGATTAGACCGCACTTTACGCATTGCTGTGACAGGGTTGAGTCGAAGCGGGAAAACTGCTTTTATCACCAGCCTTATTAACCAATTGTTACATATCAATCGCGTGGATAATAGCCATCTGCCGCTCTTTGATGCGGCGCGGCGGCGCGGGATTATTGCGGTAAAACGTATTCCTCAACCGGATTTATCCGTTCCCCGTTTTGATTATGATGGCAATCTCAATGCCTTGTCGCAGCAACCGCCTGTTTGGCCGCAATCTACCAGAAGTGTAAGCGAAACCCGACTGGCGATTCGTTATCAGCGTAGTTCGGGCTTATTGCGTCATGTTAAAGAAAAAGGCACGTTGTATCTGGATATTTTTGACTATCCGGGCGAATGGCTGTTGGATTTGCCTTTGCTGGAA > 1/908219‑908698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |