| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 887,745 | T→G | intergenic (‑17426/‑9236) | unknown ← / → unknown | tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 887,745 | 0 | T | G | 98.6% | 210.1 / NA | 73 | intergenic (‑17426/‑9236) | unknown/unknown | tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (38/34); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTTAATCATTCACGGTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTTTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGCATCTTT > 1/887500‑887990 | aTTTAATCATTCACGGTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGc < 1:752346/250‑1 (MQ=255) ttCACGGTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTaa > 1:241475/1‑251 (MQ=255) gTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATTCCAACTGAATTTTTATATCGTTCAGTCAGGGTTTTTGCGGCAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCa > 1:784488/1‑251 (MQ=255) gTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTTTATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCa > 1:117547/1‑251 (MQ=255) gTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCa > 1:685532/1‑251 (MQ=255) gTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCa > 1:617684/1‑251 (MQ=255) gATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGt > 1:733260/1‑251 (MQ=255) gATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGCAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATTTCGCTCAGCCAGGATTTTTGCGGAAAAGGATAAATTAGTTTTTGCCCCGTTTTAAAAAGCAGt > 1:145674/1‑251 (MQ=255) gAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGccc < 1:658146/229‑1 (MQ=255) gcgcCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCtttt > 1:498523/1‑251 (MQ=255) aCGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGt < 1:80489/248‑1 (MQ=255) caTTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTg < 1:9000/215‑1 (MQ=255) aaTTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACcgc > 1:195311/1‑239 (MQ=255) ttattaGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGccc > 1:596133/1‑178 (MQ=255) ttattaGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTc < 1:535138/219‑1 (MQ=255) ttattaGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTttcatttcat > 1:742983/1‑251 (MQ=255) ttattaGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTttcatttcat > 1:871629/1‑251 (MQ=255) ttattaGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGGTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTAtt > 1:423870/1‑212 (MQ=255) aTGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCgg < 1:221023/251‑1 (MQ=255) gTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCa > 1:68872/1‑251 (MQ=255) gTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGa > 1:217713/1‑251 (MQ=255) ggATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACgg > 1:300546/1‑251 (MQ=255) ggATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACgg > 1:718345/1‑251 (MQ=255) aTCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTAc > 1:31543/1‑193 (MQ=255) aTCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCa > 1:9100/1‑251 (MQ=255) aTTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTTTATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCtttcatttc < 1:508640/204‑1 (MQ=255) aTTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCCGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCtt > 1:795832/1‑251 (MQ=255) aTTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAg > 1:780557/1‑209 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTg < 1:697162/146‑1 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGTTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGc > 1:580459/1‑250 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCtttcatttc > 1:7014/1‑193 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCtttcatt < 1:430996/191‑1 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCtttcat > 1:201641/1‑190 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCtt > 1:622162/1‑186 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGc > 1:789466/1‑250 (MQ=255) atatTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGc > 1:312534/1‑250 (MQ=255) aTGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATc < 1:709547/251‑1 (MQ=255) aTGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATc < 1:641288/251‑1 (MQ=255) gCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTAt > 1:371788/1‑248 (MQ=255) gCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGCTTTAAAAAGCAGTTTAGAc > 1:888920/1‑134 (MQ=255) gTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTaaaa < 1:404160/107‑1 (MQ=255) gCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCttt > 1:26626/1‑251 (MQ=255) gCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCttt > 1:237589/1‑251 (MQ=255) gTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCAccc < 1:386285/183‑1 (MQ=255) ttttCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGAc < 1:567367/250‑1 (MQ=255) ttttCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGAc < 1:29492/250‑1 (MQ=255) ttttCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACt < 1:228366/251‑1 (MQ=255) tttCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTtcatc > 1:252575/1‑159 (MQ=255) cAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAgct < 1:19592/251‑1 (MQ=255) aaGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAgctgc < 1:359840/251‑1 (MQ=255) gAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGAt > 1:99267/1‑181 (MQ=255) aaaaaaTCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGctgctg < 1:705783/250‑1 (MQ=255) aaaaaaTCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGctgctg < 1:860240/250‑1 (MQ=255) aaaaTCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTAt < 1:726357/251‑1 (MQ=255) aaTCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCt < 1:114552/251‑1 (MQ=255) cccAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTCAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCtttc < 1:226555/251‑1 (MQ=255) cAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCtttcat < 1:172816/251‑1 (MQ=255) gAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACtt > 1:846905/1‑182 (MQ=255) aTTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAg < 1:768654/162‑1 (MQ=255) tttttATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTttgcgt > 1:467950/1‑138 (MQ=255) tttttATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCt < 1:414320/193‑1 (MQ=255) tttttATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGa > 1:802757/1‑251 (MQ=255) cGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTg > 1:344961/1‑251 (MQ=255) tcagtcagGATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTCTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCa < 1:443880/251‑1 (MQ=255) gtcagGATTTTTGCGGAAAAGGATAAATTAGTTGTTGccc < 1:418248/40‑1 (MQ=255) ggATTTTTGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCAt > 1:200916/1‑250 (MQ=255) tttGCGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCAttt < 1:550233/251‑1 (MQ=255) cGGAAAAGGATAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTc < 1:490878/251‑1 (MQ=255) aTAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGc < 1:91846/251‑1 (MQ=255) aTAAATTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGc < 1:585084/251‑1 (MQ=255) aaTTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGCAt > 1:123766/1‑250 (MQ=255) aTTAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCAc < 1:774524/136‑1 (MQ=255) tAGTTGTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTTCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGCATCttt < 1:161636/251‑1 (MQ=255) | ATTTAATCATTCACGGTGATGTGGAGCATGGCGCCGAAGTGGCGGCAGACGGCAATATTCACATTTACGGCGAATTATTAGGGCGCGCCATGGCGGGCGTCAACAGCAGTTCAGGATCTATTTATGCACAATATTTAGATGCCGAATTCGTGGCGGTAAATAGCCGTTTTCTGTACAAAGAAAAAATCCCAACTGAATTTTTATATCGTTCAGTCAGGATTTTTGCGGAAAAGGATAAATTAGTTTTTGCCCCGTTTTAAAAAGCAGTTTAGACTGCTTTTTTATTTGCTTTCAGTTTCGCTTTTTACCGCGTCTTTCATTTCATCAGTTTGCGTTGCGGTGGCACCCATTTTTTCAGATACGGCATCTTTCACTTCGGCCATTTTATCTGCCGCTGCGTCTTTTGCATCTTTGACTGCTTCAGCTGCTGTATCTTTCATTTCATTGACTTGTGTTGCCATGGCATCCATTTTTTCAGATATGGCATCTTT > 1/887500‑887990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |