Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 728,174 T→G intergenic (‑5460/‑59017) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1728,1740TG100.0% 194.5 / NA 66intergenic (‑5460/‑59017)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (37/29);  total (37/29)

CAGTTATCCGTCCTTTTCCGTGCAGCATAATGACGATGAAGAACATGCCGTTTTCAGCATCCGCCGCACGCATGAACCGAAATATCAGGATCCAAGATACAAAATTTCCACGGAAAACATGGAAAAATTCATTTTAGCCAAAAATAACCTGGAATATTGTTTGTTACCGGAATTGGGCAAGCAATCGGATAAACGTGTTACCGCCCTTGAAAAACGGCTATTAAAAGATATGATCAATGACGAGTTGTCGAAGATTGTGGGCAAAGCGTCGGCGCGTACGATTTTTGACGATCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCACTTTCGCGATCGTCTCAACGAACGCAAACGCCGGCAAGGCTTGGCGGGCGACAGTCGTTCTGTTGAAAACCAAGTGCAAAAGCAACGACAAACGATAGACG  >  1/727927‑728414
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
tggttatccggtcccttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGa                                                                                                                                                                                                                                               >  1:810757/16‑251 (MQ=255)
 ggttatccggtcccttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGaa                                                                                                                                                                                                                                              >  1:13011/15‑251 (MQ=255)
         ggtcccttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTgg                                                                                                                                                                                                                                      >  1:735009/7‑251 (MQ=255)
            cccttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCa                                                                                                                                                                                                                                   >  1:803649/4‑251 (MQ=255)
              cttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaa                                                                                                                                                                                                                                 >  1:591671/2‑251 (MQ=255)
              cttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaa                                                                                                                                                                                                                                 >  1:585668/2‑251 (MQ=255)
               ttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCCCCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaac                                                                                                                                                                                                                                <  1:99062/251‑2 (MQ=255)
               ttCCGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaac                                                                                                                                                                                                                                <  1:689318/251‑2 (MQ=255)
                 ccGTGCAGCATAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaacca                                                                                                                                                                                                                              <  1:33720/251‑4 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGAt                                                                                                                                                                                                                                           <  1:760806/231‑1 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCaaaccatcgg                                                                                                                                                                                                                          >  1:877428/1‑241 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:311624/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:14263/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:359877/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:485292/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:663833/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:841660/1‑250 (MQ=255)
                        gcaTAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGgcg                                                                                                                                                                                                                        >  1:590613/1‑250 (MQ=255)
                           tAATGATGATGAAGAAAATGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGcgcgca                                                                                                                                                                                                                    >  1:344240/1‑249 (MQ=255)
                                         aaaaTGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACg                                                                                                                                                                                                        <  1:408953/246‑1 (MQ=255)
                                            aTGCCGTTTTCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAg                                                                                                                                                                                                   <  1:219933/251‑1 (MQ=255)
                                                ctttttCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACAAGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGtctt                                                                                                                                                                                               <  1:186546/249‑1 (MQ=255)
                                                  ttttCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGtcttc                                                                                                                                                                                              <  1:22906/250‑1 (MQ=255)
                                                   tttCAGCACCCGCCGCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTcttctt                                                                                                                                                                                            >  1:78169/1‑251 (MQ=255)
                                                         cacccgccgCACGCATGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTa                                                                                                                                                                                           >  1:816875/4‑246 (MQ=255)
                                                                    cgcaTGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTa                                                                                                                                                                                           >  1:536522/1‑235 (MQ=255)
                                                                    cgcaTGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAAttt                                                                                                                                                                           >  1:869396/1‑251 (MQ=255)
                                                                    cgcaTGAACCGAAATATCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAAttt                                                                                                                                                                           >  1:195905/1‑251 (MQ=255)
                                                                                 atatCAGGATCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATcaacaa                                                                                                                                                               >  1:610534/1‑250 (MQ=255)
                                                                                         aTCCGAGATACAAAATTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCAc                                                                                                                                                      <  1:676342/251‑1 (MQ=255)
                                                                                                    aaaaTTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATaa                                                                                                                                           <  1:823312/251‑1 (MQ=255)
                                                                                                      aaTTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTa                                                                                                                                                                                           <  1:623237/201‑1 (MQ=255)
                                                                                                      aaTTTCCACAGAAGACATGGAAAAATTCATTTTAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACa                                                                                                                                         <  1:306521/251‑1 (MQ=255)
                                                                                                                                     ttAGCCAAAAATAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACg                                                                                                          <  1:49425/251‑1 (MQ=255)
                                                                                                                                             aaaTAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCAtttt                                                                                                   >  1:156926/1‑250 (MQ=255)
                                                                                                                                              aaTAACTTGGAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTcg                                                                                                 <  1:254921/251‑1 (MQ=255)
                                                                                                                                                      ggAATATTGTTTGTTGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACg                                                                                                                                                                                         <  1:597034/155‑1 (MQ=255)
                                                                                                                                                              gtttgttGCCGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCaacgaa                                                                                 >  1:347133/1‑251 (MQ=255)
                                                                                                                                                                    tgccGGAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGAtttt                                                                                                                                                                                                             >  1:520153/3‑121 (MQ=255)
                                                                                                                                                                         gAATTGGGCAAGCAATCGGACGAACGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCgcc                                                                                         <  1:827179/232‑3 (MQ=255)
                                                                                                                                                                                           gacgaaCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGc                                                                                                                        >  1:239162/5‑183 (MQ=255)
                                                                                                                                                                                               aaCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGAt                                                                                             <  1:119193/206‑1 (MQ=255)
                                                                                                                                                                                               aaCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGt                                                >  1:624029/1‑251 (MQ=255)
                                                                                                                                                                                                aCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAAt                                                                                                                          <  1:421098/176‑1 (MQ=255)
                                                                                                                                                                                                aCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGc                                                                                                                        <  1:129612/178‑1 (MQ=255)
                                                                                                                                                                                                aCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGcctc                                                                                       <  1:707499/211‑1 (MQ=255)
                                                                                                                                                                                                aCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGt                                                >  1:226126/1‑250 (MQ=255)
                                                                                                                                                                                                aCGTGTTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGGGACAGt                                                >  1:558556/1‑250 (MQ=255)
                                                                                                                                                                                                  gtgtTACTGCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGt                                             >  1:562384/1‑251 (MQ=255)
                                                                                                                                                                                                          gCCCTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGa                                     >  1:350079/1‑251 (MQ=255)
                                                                                                                                                                                                           cccTTGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAAc                                                                                                                                          <  1:63035/149‑1 (MQ=255)
                                                                                                                                                                                                              ttGAAAAACGCTTATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAAc                                 <  1:826907/251‑1 (MQ=255)
                                                                                                                                                                                                                          tATTAAAAGATATGATCAATGACGAGTTTGCGAAGATTGTGGGCAAAACTTCGGCGCGCATGATTTTTGACGTGCAGACTTCTTACGATCATTTTCAATTTAAGAATCAACAACTCAATCACGGCATGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGCAAACGc                                                                        >  1:27893/1‑200 (MQ=255)
                                                                                                                                                                                                                          tATTAAAAGATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGc                                                                                                                        <  1:427334/152‑1 (MQ=255)
                                                                                                                                                                                                                                  gATATGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACa             >  1:14135/1‑251 (MQ=255)
                                                                                                                                                                                                                                   atatGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCa                               <  1:90385/232‑1 (MQ=255)
                                                                                                                                                                                                                                   atatGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACaa            <  1:634074/251‑1 (MQ=255)
                                                                                                                                                                                                                                     atGATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACAt                                                                                                                                        >  1:465626/1‑125 (MQ=255)
                                                                                                                                                                                                                                       gATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGa        >  1:797376/1‑251 (MQ=255)
                                                                                                                                                                                                                                       gATCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGa        >  1:839317/1‑251 (MQ=255)
                                                                                                                                                                                                                                        aTCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGAt       >  1:796636/1‑251 (MQ=255)
                                                                                                                                                                                                                                         tCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCAc                                                                                                                                                      <  1:422230/107‑1 (MQ=255)
                                                                                                                                                                                                                                         tCAATGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATa      >  1:652731/1‑251 (MQ=255)
                                                                                                                                                                                                                                            aTGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGAc   <  1:839783/251‑1 (MQ=255)
                                                                                                                                                                                                                                            aTGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGAc   <  1:561636/251‑1 (MQ=255)
                                                                                                                                                                                                                                             tGACGAGTTGGCGAAGATTGTGGGCAAACCATCGGCGCGCACGATTTTTGACGAGCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCATTTTCGCGATCGCCTCAACGAACGTAAACGCCGTCAAGGCTTGGCGGGTGACAGTCGTTCCGTTGAAAACCAAATGCAGAAGCAACGACAAACGATAGACg  <  1:696428/251‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
CAGTTATCCGTCCTTTTCCGTGCAGCATAATGACGATGAAGAACATGCCGTTTTCAGCATCCGCCGCACGCATGAACCGAAATATCAGGATCCAAGATACAAAATTTCCACGGAAAACATGGAAAAATTCATTTTAGCCAAAAATAACCTGGAATATTGTTTGTTACCGGAATTGGGCAAGCAATCGGATAAACGTGTTACCGCCCTTGAAAAACGGCTATTAAAAGATATGATCAATGACGAGTTGTCGAAGATTGTGGGCAAAGCGTCGGCGCGTACGATTTTTGACGATCAGTCTTCTTACGATTATTTTCAATTTAAGTATCAACAACTCAATCACGGTGTGAATAACATTCGTGAATTTGAATGCCGCGATTTGAAACGGCACTTTCGCGATCGTCTCAACGAACGCAAACGCCGGCAAGGCTTGGCGGGCGACAGTCGTTCTGTTGAAAACCAAGTGCAAAAGCAACGACAAACGATAGACG  >  1/727927‑728414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑