Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 727,479 C→T intergenic (‑4765/‑59712) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1727,4790CT100.0% 198.4 / NA 67intergenic (‑4765/‑59712)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/36);  total (31/36)

TTTACAAATTGCCAGCGCAGATGAAAGTGGCTTGCCGACGGCGGCGCAAATTGAACAATGGGCAACAGCGGCAGTGCAACCGCAAAGCGGGGAAATTGAGATGACCGTACGCATTGTGGACGAGACGGAAAGCCACGCATTAAATCTTAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAGCTGTCGCTATTGGGCGATTTGGTGATTTGCCGTCAAGTGGTGGAGCGCGAAGCCCAAGAGCAAGACAAACCGCTCATGGCGTATTGGGCACACATGGTGGTGCATGGCGGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAGACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAATTCGGAATGTGTAAAACTA  >  1/727233‑727702
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                               
tttACAAATCGCCAGCGCAGATGAAAATGGCTTGCCGACGGCGGAGCAAATTGAGCAATGGGCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTgtcgtc                                                                                                                                                                                                                             <  1:546676/251‑1 (MQ=255)
                   gATGAAAATGGCTTGCCGACGGCGGAGCAAATTGAGCAATGGGCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAg                                                                                                                                                                                                                          <  1:166424/235‑1 (MQ=255)
                                     aCGGCGGAGCAAATTGAGCAATGGGCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAAcc                                                                                                                                                                                        <  1:395898/251‑1 (MQ=255)
                                                      gcAATGGGCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTggg                                                                                                                                                                       >  1:174269/2‑251 (MQ=255)
                                                         aTGGGCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGca                                                                                                                                                                     >  1:797760/1‑250 (MQ=255)
                                                            ggCAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAg                                                                                                                                                                                                                  <  1:313794/202‑1 (MQ=255)
                                                              cAACGGCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTACCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATCTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAtg                                                                                                                                                               >  1:216902/1‑251 (MQ=255)
                                                                   gCGGCAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAtggtgg                                                                                                                                                           <  1:141467/250‑1 (MQ=255)
                                                                       cAGTGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGag                                                                                                                                                                                             >  1:691261/1‑211 (MQ=255)
                                                                          tGCAACCGCAAAGTGATGAAGTGGAAATGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCac                                                                                                                                                      <  1:876441/248‑2 (MQ=255)
                                                                              accgcaaagtgatgaagtggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGtt                                                                                                                                               >  1:67083/23‑251 (MQ=255)
                                                                                        gatgaagtggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAt                                                                                                                                                                >  1:674036/13‑224 (MQ=255)
                                                                                            aagtggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTggg                                                                                                                                                                       <  1:761752/205‑1 (MQ=255)
                                                                                              gtggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGACCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTa                                                                                                                               >  1:782267/7‑251 (MQ=255)
                                                                                              gtggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAACGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTc                                                                                                                                    >  1:576827/7‑246 (MQ=255)
                                                                                               tggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAtggtgg                                                                                                                                                           <  1:147480/217‑1 (MQ=255)
                                                                                                ggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGag                                                                                                                                                                                             <  1:384011/183‑2 (MQ=255)
                                                                                                ggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAt                                                                                                                                                                <  1:863527/212‑1 (MQ=255)
                                                                                                ggaaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATg                                                                                                                             >  1:769070/5‑251 (MQ=255)
                                                                                                  aaaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGAt                                                                                                                           >  1:141228/3‑251 (MQ=255)
                                                                                                   aaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          <  1:662514/250‑1 (MQ=255)
                                                                                                   aaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          <  1:646851/250‑1 (MQ=255)
                                                                                                   aaTGACTGTGCGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          <  1:318178/250‑1 (MQ=255)
                                                                                                     tgactgtgcGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCat                                                                                                                        >  1:726057/9‑251 (MQ=255)
                                                                                                       actgtgcGCATTGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGtggtgg                                                                                                                                                                                                                    <  1:328432/151‑1 (MQ=255)
                                                                                                                 ttGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAagag                                                                                                                                                                                                   >  1:533413/1‑164 (MQ=255)
                                                                                                                 ttGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAtggtgg                                                                                                                                                           >  1:349286/1‑204 (MQ=255)
                                                                                                                 ttGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGa                                                                                                             >  1:196969/1‑250 (MQ=255)
                                                                                                                 ttGTGGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCACCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGtggtgg                                                                                                                                                                                                                    <  1:644194/147‑1 (MQ=255)
                                                                                                                   gtgGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          >  1:760957/1‑235 (MQ=255)
                                                                                                                    tgGACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGa                                                                                                          <  1:440046/250‑1 (MQ=255)
                                                                                                                     ggACGAGATGGAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAg                                                                                                        >  1:676804/1‑251 (MQ=255)
                                                                                                                           gatggAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTc                                                                                                                                    <  1:778042/214‑1 (MQ=255)
                                                                                                                            atggAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACAtggtgg                                                                                                                                                           <  1:298273/191‑1 (MQ=255)
                                                                                                                            atggAAAGCCACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCggagga                                                                                                 >  1:894455/3‑251 (MQ=255)
                                                                                                                                    ccACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGaa                                                                                          <  1:588389/250‑1 (MQ=255)
                                                                                                                                    ccACGCATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGaa                                                                                          <  1:189549/250‑1 (MQ=255)
                                                                                                                                         cATTAAATCTCAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          >  1:365236/1‑213 (MQ=255)
                                                                                                                                                 ctcaaTTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCa                                                                            >  1:390134/4‑251 (MQ=255)
                                                                                                                                                   caaTTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGaggc                                                                                                                                                                                                          <  1:847556/122‑4 (MQ=255)
                                                                                                                                                   caaTTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGAc                                                                                                            <  1:871402/216‑1 (MQ=255)
                                                                                                                                                          cGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGGAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGAt                                                                   <  1:3532/251‑1 (MQ=255)
                                                                                                                                                             ggCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAgtgg                                                                                                                                                                                                                       >  1:396210/1‑100 (MQ=255)
                                                                                                                                                             ggCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAgg                                                                >  1:576486/1‑251 (MQ=255)
                                                                                                                                                                  aGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCac                                                                                                                                                      <  1:81299/160‑2 (MQ=255)
                                                                                                                                                                        ccccACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGgaaa                                                                                >  1:831430/1‑222 (MQ=255)
                                                                                                                                                                        ccccACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTg                                                     >  1:59905/1‑251 (MQ=255)
                                                                                                                                                                          ccACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCACATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGt                                                    >  1:85136/1‑250 (MQ=255)
                                                                                                                                                                          ccACTAATGTGCTGTCTTTCCCTTTTGAATCCCCTGATGAAGTGGAACTGCCGTTATTGGGCAATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTc                                                   <  1:350772/251‑1 (MQ=255)
                                                                                                                                                                             cTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATc                                                                                                                          <  1:510259/177‑1 (MQ=255)
                                                                                                                                                                                  gtgCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTg                                                                                                                    <  1:120992/178‑1 (MQ=255)
                                                                                                                                                                                     cTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATc                                         <  1:897916/250‑1 (MQ=255)
                                                                                                                                                                                     cTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATc                                         <  1:210376/250‑1 (MQ=255)
                                                                                                                                                                                       gTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGa                                      >  1:630872/1‑251 (MQ=255)
                                                                                                                                                                                       gTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGa                                      >  1:521505/1‑251 (MQ=255)
                                                                                                                                                                                       gTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGa                                      >  1:40111/1‑251 (MQ=255)
                                                                                                                                                                                        tCTTTCCCTTTTGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAg                                     <  1:588628/251‑1 (MQ=255)
                                                                                                                                                                                                   tGAATGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCt                                        >  1:793496/1‑237 (MQ=255)
                                                                                                                                                                                                      aTGCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGaaa                       <  1:865091/251‑1 (MQ=255)
                                                                                                                                                                                                        gCCCTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGggcttggc                                                         <  1:302764/215‑1 (MQ=255)
                                                                                                                                                                                                           cTGATGAAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGAt                                                                   <  1:62584/202‑1 (MQ=255)
                                                                                                                                                                                                             gatgaAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAg                                                                                                                 >  1:422596/1‑154 (MQ=255)
                                                                                                                                                                                                             gatgaAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAAGTCgg                >  1:867279/1‑251 (MQ=255)
                                                                                                                                                                                                             gatgaAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAAGTCgg                >  1:354887/1‑251 (MQ=255)
                                                                                                                                                                                                             gaggaAGTGGAACTGCCGTTATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATc                                               <  1:211345/217‑1 (MQ=255)
                                                                                                                                                                                                                         ctgccgttATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAAGTCGGAAAGTGTAAAAc    <  1:200994/244‑1 (MQ=255)
                                                                                                                                                                                                                            ccgttATTGGGCGATTTGGTGATTTGTCGTCAAGTGGTGGAGAGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCAGTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAAGTCGGAAAGTGTAAAACTa  <  1:433959/246‑1 (MQ=255)
                                                                                                                                                                                                                                                gATTTGTCGTCAAGTGGTGGAGCGCGAGGCTCAAGAGCAAGAGAAACCGCTCATGGCGCATTGGGCACACATGGTGGTGCACGGCAGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAAACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAAGTCGGaaag            <  1:28042/220‑3 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                               
TTTACAAATTGCCAGCGCAGATGAAAGTGGCTTGCCGACGGCGGCGCAAATTGAACAATGGGCAACAGCGGCAGTGCAACCGCAAAGCGGGGAAATTGAGATGACCGTACGCATTGTGGACGAGACGGAAAGCCACGCATTAAATCTTAATTATCGTGGCAAAGATCGCCCCACTAATGTGCTGTCTTTCCCTTTTGAATGCCCTGATGAAGTGGAGCTGTCGCTATTGGGCGATTTGGTGATTTGCCGTCAAGTGGTGGAGCGCGAAGCCCAAGAGCAAGACAAACCGCTCATGGCGTATTGGGCACACATGGTGGTGCATGGCGGTTTGCATTTACTCGGTTATGATCATATTGAAGATGACGAAGCGGAGGAAATGGAAAGCTTGGAGACGCAAATTATGATAGGGCTTGGCTTTGTCGATCCGTATCTGAGCGAGAAGTAAGAAAAATTCGGAATGTGTAAAACTA  >  1/727233‑727702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑