Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 676,935 T→C intergenic (+66761/+16422) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1676,9350TC100.0% 184.4 / NA 61intergenic (+66761/+16422)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/34);  total (27/34)

TGCCAAACATTCCGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGTTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGATGCCTATGTCAAACTGGCGCTTATCAGC  >  1/676697‑677180
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                     
tGCCAAACATTCCGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCgg                                                                                                                                                                                                                                           <  1:108982/251‑1 (MQ=255)
       cATTCCGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGatat                                                                                                                                                                                                                                    <  1:837478/251‑1 (MQ=255)
         ttCCGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGAtattt                                                                                                                                                                                                                                  >  1:114040/1‑251 (MQ=255)
           ccGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGAtatttat                                                                                                                                                                                                                                <  1:646291/251‑1 (MQ=255)
              aTGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTc                                                                                                                                                                                                                              <  1:121967/250‑1 (MQ=255)
                      gtgtTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCaa                                                                                                                                                                                                                     >  1:875995/1‑251 (MQ=255)
                      gtgtTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCaa                                                                                                                                                                                                                     >  1:325853/1‑251 (MQ=255)
                         ttGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGc                                                                                                                                                                                                                  <  1:604651/251‑1 (MQ=255)
                                 cATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGat                                                                                                                                                                                                                                      <  1:544574/223‑1 (MQ=255)
                                 cATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAgg                                                                                                                                                                                                          <  1:594232/251‑1 (MQ=255)
                                         cggcggAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGa                                                                                                                                                                                                   <  1:508994/250‑1 (MQ=255)
                                          ggcggAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGata                                                                                                                                                                                                 >  1:476844/1‑251 (MQ=255)
                                               aaGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAatat                                                                                                                                                                                             <  1:1198/250‑1 (MQ=255)
                                                  cGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTg                                                                                                                                                                                         >  1:145661/1‑251 (MQ=255)
                                                   ggCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTgg                                                                                                                                                                                        >  1:169140/1‑251 (MQ=255)
                                                    gCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGat                                                                                                                                                                                                  >  1:416196/1‑240 (MQ=255)
                                                    gCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGa                                                                                                                                                                                       >  1:266997/1‑251 (MQ=255)
                                                          cAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACa                                                                                                                                                                                    <  1:145136/248‑1 (MQ=255)
                                                          cAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGt                                                                                                                                                                                 >  1:544802/1‑251 (MQ=255)
                                                             cGGGGCGATGAATTCAGCGCGAATCGTTATGTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGAtattta                                                                                                                                                                                                                                 <  1:440006/200‑1 (MQ=255)
                                                                    aTGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATc                                                                                                                                                                        >  1:312013/1‑250 (MQ=255)
                                                                                  aaTCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGc                                                                                                                                                         <  1:763708/251‑1 (MQ=255)
                                                                                    tCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAatat                                                                                                                                                                                             <  1:95773/213‑1 (MQ=255)
                                                                                       ttATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAg                                                                                                                                                    >  1:793037/1‑251 (MQ=255)
                                                                                         aTTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCGGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAgg                                                                                                                                                   >  1:561774/1‑250 (MQ=255)
                                                                                             aaTCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTg                                                                                                                                              <  1:339689/251‑1 (MQ=255)
                                                                                                       aCGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATc                                                                                                                                                                                                                        <  1:109689/167‑1 (MQ=255)
                                                                                                        cGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTc                                                                                                                                           >  1:613555/1‑243 (MQ=255)
                                                                                                        cGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAg                                                                                                                                   <  1:674042/251‑1 (MQ=255)
                                                                                                        cGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAg                                                                                                                                   <  1:175619/251‑1 (MQ=255)
                                                                                                         ggAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAatat                                                                                                                                                                                             <  1:420398/192‑1 (MQ=255)
                                                                                                          gAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGc                                                                                                                                  <  1:376617/250‑1 (MQ=255)
                                                                                                                 cTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGt                                                                                                                           <  1:581499/250‑1 (MQ=255)
                                                                                                                       ccGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGAc                                                                                                                    <  1:128532/251‑1 (MQ=255)
                                                                                                                                  aTTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTgg                                                                                                          <  1:550652/250‑1 (MQ=255)
                                                                                                                                     cTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGt                                                                                                                 <  1:205713/240‑1 (MQ=255)
                                                                                                                                                     cccGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACgaagaa                                                                                      >  1:891578/1‑251 (MQ=255)
                                                                                                                                                       cGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAgg                                                                                    >  1:181465/1‑251 (MQ=255)
                                                                                                                                                               gTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGcc                                                                                                                                                                                                                 >  1:534087/1‑118 (MQ=255)
                                                                                                                                                               gTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAatat                                                                                                                                                                                             <  1:639513/138‑1 (MQ=255)
                                                                                                                                                               atcaatttcgtattatcttccGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACg                                                                            <  1:697808/232‑1 (MQ=255)
                                                                                                                                                                   caacaGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGttt                                                                        >  1:3352/1‑251 (MQ=255)
                                                                                                                                                                        gCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGc                                                                                                                                                  <  1:700743/172‑1 (MQ=255)
                                                                                                                                                                        gCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTgg                                                                   >  1:83438/1‑251 (MQ=255)
                                                                                                                                                                            aaaTTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGAtattt                                                                                                                                                                                                                                  >  1:620896/1‑88 (MQ=255)
                                                                                                                                                                                        gcACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGaac                                                    <  1:704925/250‑1 (MQ=255)
                                                                                                                                                                                                 tCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGat                                                                                                                                                                                                  >  1:497024/1‑99 (MQ=255)
                                                                                                                                                                                                 tCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTaa                                          >  1:357172/1‑251 (MQ=255)
                                                                                                                                                                                                   tgtgGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAAc                                        <  1:799678/251‑1 (MQ=255)
                                                                                                                                                                                                           gTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATc                                                                                                                               <  1:520623/156‑1 (MQ=255)
                                                                                                                                                                                                           gTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGAc                                                                             <  1:105624/206‑1 (MQ=255)
                                                                                                                                                                                                           gTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATg                                                       >  1:394465/1‑228 (MQ=255)
                                                                                                                                                                                                           gTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTaa                                 >  1:461553/1‑250 (MQ=255)
                                                                                                                                                                                                             ttgttgttgATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGa                              <  1:812600/251‑1 (MQ=255)
                                                                                                                                                                                                                  gttgATGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGGGGGATGAACAACCACGTAAACGTCGTAACGATGc                           >  1:45981/1‑249 (MQ=255)
                                                                                                                                                                                                                     aaTGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAAc                                <  1:883677/240‑1 (MQ=255)
                                                                                                                                                                                                                      aTGGAAGGTCGCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGataat                                                                                                                                                                                               <  1:820239/81‑1 (MQ=255)
                                                                                                                                                                                                                                gCAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAAc                                        >  1:159670/1‑222 (MQ=255)
                                                                                                                                                                                                                                 cAATAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGATGCCTATGTCAAACt               >  1:511831/1‑246 (MQ=255)
                                                                                                                                                                                                                                   aTAAAGAAGTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGATGCCTATGTCAAACTGGCGCtt        >  1:95531/1‑251 (MQ=255)
                                                                                                                                                                                                                                         aagTGCTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGATGCCTATGTCAAACTGGCGCTTATCAGc  <  1:636993/251‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                     
TGCCAAACATTCCGATGAGCCGGTGTTGAATTTCATTAAAGCGGCGGAAGCGGCACAGCAACGGGGCGATGAATTCAGCGCGAATCGTTATTTAATCGAAGCCACGGAAATTGCTGGTTCCGACAGTTTGATTCTGGAAATTGCGCGCACCCGCATTTTGTTACAACAGCATAAATTACCGGCGGCACGCAGTTCTGTGGACAGTTTGTTGTTGATGGAAGGTCGCAATAAAGAAGTGTTAAAGCTGGCGGTGGATATTTATTCTAAATCCAAAGCCTATCAGGCGTTAGATAATATTTTGGAACAAGTGGAAAAATCCGGTTTGTACTCGGCAGAAGGCTTTGTTCAGTTACAGCATCAGGTAGAAGACGGTTTGCTGGATGAAAAAATGAACGAAGAAGGCGTGGACGGTTTGTTGGATTGGTGGGATGAACAACCACGTAAACGTCGTAACGATGCCTATGTCAAACTGGCGCTTATCAGC  >  1/676697‑677180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑