Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 674,743 T→C intergenic (+64569/+18614) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1674,7430TC100.0% 212.8 / NA 74intergenic (+64569/+18614)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/36);  total (38/36)

CCGGTGCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGTGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTTCTTTTTTATAGGTAACGAATATGGCTAA  >  1/674496‑674977
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                            
ccGGTGCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGAc                                                                                                                                                                                                                                           <  1:886709/251‑1 (MQ=255)
 cGGTGCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGAcc                                                                                                                                                                                                                                          <  1:839393/251‑1 (MQ=255)
     gCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTg                                                                                                                                                                                                                                      >  1:576798/1‑251 (MQ=255)
     gCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTg                                                                                                                                                                                                                                      >  1:883598/1‑251 (MQ=255)
     gCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGAGTGCCGGCATTCAAACCATTGTGGCGACCAGTg                                                                                                                                                                                                                                      >  1:141317/1‑251 (MQ=255)
      cATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTg                                                                                                                                                                                                                                      >  1:256966/1‑250 (MQ=255)
             ccACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAAtt                                                                                                                                                                                                                              <  1:879422/251‑1 (MQ=255)
                       ggAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAAt                                                                                                                                                                                                                    >  1:652137/1‑251 (MQ=255)
                          aaaCAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGATAAAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTa                                                                                                                                                                                                                  >  1:32477/1‑251 (MQ=255)
                                cGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTg                                                                                                                                                                                                               <  1:397384/247‑1 (MQ=255)
                                cGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGAt                                                                                                                                                                                                            <  1:838347/250‑1 (MQ=255)
                                    gggTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAg                                                                                                                                                                                                                 >  1:617651/1‑241 (MQ=255)
                                       ttgttACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGc                                                                                                                                                                                                     <  1:789897/250‑1 (MQ=255)
                                             cAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCAGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCaaaa                                                                                                                                                                                              >  1:556807/1‑251 (MQ=255)
                                              aaTTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAAt                                                                                                                                                                                             >  1:249528/1‑251 (MQ=255)
                                               aTTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCAcc                                                                                                                                                                                                                        >  1:622845/1‑223 (MQ=255)
                                               aTTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATg                                                                                                                                                                                            >  1:237664/1‑251 (MQ=255)
                                                       ccATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGaaa                                                                                                                                                                                                                                >  1:742749/1‑207 (MQ=255)
                                                         aTGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAAt                                                                                                                                                                                    <  1:2231/249‑1 (MQ=255)
                                                         aTGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTg                                                                                                                                                                                  <  1:154086/251‑1 (MQ=255)
                                                              ggATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCGGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTaa                                                                                                                                                                             >  1:113739/1‑251 (MQ=255)
                                                                  cTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAg                                                                                                                                                                         <  1:748201/251‑1 (MQ=255)
                                                                                  gtgtTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACttatta                                                                                                                                                           >  1:727355/1‑250 (MQ=255)
                                                                                   tgtTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTAc                                                                                                                                                          <  1:796693/250‑1 (MQ=255)
                                                                                   tgtTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTAc                                                                                                                                                          <  1:579321/250‑1 (MQ=255)
                                                                                     ttAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAg                                                                                                                                                        <  1:480092/250‑1 (MQ=255)
                                                                                     ttAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAg                                                                                                                                                        <  1:505773/250‑1 (MQ=255)
                                                                                     ttAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGt                                                                                                                                                       <  1:583606/251‑1 (MQ=255)
                                                                                                  gCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAg                                                                                                                                                        <  1:65604/237‑1 (MQ=255)
                                                                                                             cGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGAt                                                                                                                                                                                                            >  1:396547/1‑174 (MQ=255)
                                                                                                                gAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAAtt                                                                                                                                                                                                                              <  1:278540/153‑1 (MQ=255)
                                                                                                                          ccGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGc                                                                                                                <  1:480208/251‑1 (MQ=255)
                                                                                                                                     cAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAAtg                                                                                                      <  1:621089/250‑1 (MQ=255)
                                                                                                                                               gggCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTtc                                                                                            <  1:92546/250‑1 (MQ=255)
                                                                                                                                                               tGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAAt                                                                            >  1:156064/1‑250 (MQ=255)
                                                                                                                                                                    aaTGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACt                                                                      <  1:588880/251‑1 (MQ=255)
                                                                                                                                                                     aTGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑Gcgaa                                                                                                                                              >  1:377705/1‑178 (MQ=255)
                                                                                                                                                                        ttATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAAtg                                                                                                      >  1:351123/1‑215 (MQ=255)
                                                                                                                                                                          aTCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTttatta                                                                >  1:445314/1‑251 (MQ=255)
                                                                                                                                                                          aTCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTttat                                                                  <  1:221296/249‑1 (MQ=255)
                                                                                                                                                                              aCGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAAtt                                                                                                                                                                                                                   <  1:859353/102‑1 (MQ=255)
                                                                                                                                                                                   aGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTAc                                                                                                                                                          >  1:527815/1‑154 (MQ=255)
                                                                                                                                                                                       cATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATCCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:453809/251‑1 (MQ=255)
                                                                                                                                                                                        aTTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:117210/250‑1 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAAc                                                                                                                                                                 >  1:709653/1‑139 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑Gcgaacgaa                                                                                                                                          >  1:857544/1‑160 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAAt                                                                                                                                         >  1:289912/1‑161 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTAc                                                               <  1:894153/235‑1 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTAc                                                               <  1:746454/235‑1 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAAc                                                           >  1:786763/1‑239 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATg                                               >  1:68953/1‑251 (MQ=255)
                                                                                                                                                                                           gTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATg                                               >  1:221069/1‑251 (MQ=255)
                                                                                                                                                                                           gTTTACAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTAc                                                                                                                                                          >  1:567301/1‑146 (MQ=255)
                                                                                                                                                                                             ttATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGt                                              >  1:376793/1‑250 (MQ=255)
                                                                                                                                                                                                taataaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCATACCATTGTGGCGGCCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:219344/242‑1 (MQ=255)
                                                                                                                                                                                                taataaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTAc                                                                                                                                                          >  1:498475/1‑141 (MQ=255)
                                                                                                                                                                                                taataaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGAc                                                                               <  1:657964/214‑1 (MQ=255)
                                                                                                                                                                                                taataaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:168258/242‑1 (MQ=255)
                                                                                                                                                                                                taataaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   >  1:875944/1‑242 (MQ=255)
                                                                                                                                                                                                    aaCGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAaac                                      <  1:34366/251‑1 (MQ=255)
                                                                                                                                                                                                          gAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAAGCGCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACt                                                                      >  1:652772/1‑215 (MQ=255)
                                                                                                                                                                                                              aaaCCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACActtttt                            <  1:9423/251‑3 (MQ=255)
                                                                                                                                                                                                               aaCCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAAt                                                                                                                                                                                    >  1:897026/1‑100 (MQ=255)
                                                                                                                                                                                                                      aTTTGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGCAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAg                   >  1:198153/1‑251 (MQ=255)
                                                                                                                                                                                                                       tttGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTtc                                                                                            <  1:258122/178‑1 (MQ=255)
                                                                                                                                                                                                                        ttGTAAGCGTGCCGGCATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:710782/218‑1 (MQ=255)
                                                                                                                                                                                                                                       cATTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   <  1:88221/203‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAAc                                                                       >  1:791960/1‑182 (MQ=255)
                                                                                                                                                                                                                                        aTTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTAc                                                               <  1:457343/190‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAaac                                      >  1:545334/1‑215 (MQ=255)
                                                                                                                                                                                                                                        aTTCAAACCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTT‑TTTTTTATAGGTAACGAATATGGCTaa  >  1:608765/1‑250 (MQ=255)
                                                                                                                                                                                                                                            aaaCCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   >  1:890417/1‑198 (MQ=255)
                                                                                                                                                                                                                                             aaCCATTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGATAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAaac                                      <  1:454987/210‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTTGTGGCGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTAc                                                   >  1:32261/1‑193 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                            
CCGGTGCATTATCCCACCGCGCAGGAAAACAGCGAAGGGTTGTTACAATTAAACGCCATGCAGGATCTGTCCGAT‑AAAACCGTGTTAATTTTGCGTGGCAACGGCGGACGTGAATTATTTGCCGAACAGGCGCAACAGCGTGGGGCGAATGTGGAAATTGTCGAATGTTATCGACGTGAGCCCATTGTTTATAATAACGCCGAGCAAACCAGCATTTGTAAGCGTGCCGGCATTCAAACCATTGTGGTGACCAGTGCCGAAATTCTCACCCAATTAGTGGATTTTGTGCCGCAAAATGAACATAATTGGTTAAAAAGTTGTCAACTTATTACAGTAA‑‑GCGAACGAATCGCCCATTTGGCGGAAGCGTTAGGCTGGCAAAATGTGGTGATTTCTCCGCGTGCGGACAATCAAACTTTATTACAAACCTTATTACAATGTCGTTAAACAACACTTTCTTTTTTATAGGTAACGAATATGGCTAA  >  1/674496‑674977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑