| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 489,045 | C→T | intergenic (+125628/‑82974) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 489,045 | 0 | C | T | 100.0% | 237.6 / NA | 82 | intergenic (+125628/‑82974) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (45/37); total (45/37) | |||||||||||
GGCACGGTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCCGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGGAGA > 1/488800‑489280 | ggCACGGTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGaa > 1:314420/1‑251 (MQ=255) cGGTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAg < 1:502218/251‑1 (MQ=255) gTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGtt > 1:49228/1‑251 (MQ=255) gTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGtt > 1:254606/1‑251 (MQ=255) aCCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAGAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTAt > 1:424572/1‑251 (MQ=255) aCCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTAt > 1:204293/1‑251 (MQ=255) ccTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTAt > 1:770254/1‑250 (MQ=255) cTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATcc < 1:200078/251‑1 (MQ=255) aTCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGa < 1:152420/251‑1 (MQ=255) gCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGatat < 1:597935/250‑1 (MQ=255) aaTCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATg < 1:117413/251‑1 (MQ=255) aaTCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATg < 1:127205/251‑1 (MQ=255) aaTCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATg < 1:157159/251‑1 (MQ=255) aTCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGt < 1:641208/251‑1 (MQ=255) cGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTgg < 1:97608/251‑1 (MQ=255) tggtgAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTg < 1:106297/250‑1 (MQ=255) ggtgAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTg > 1:724822/1‑249 (MQ=255) gtgAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGt > 1:293020/1‑243 (MQ=255) gAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTa > 1:110230/1‑249 (MQ=255) aaGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATcc > 1:200498/1‑222 (MQ=255) gTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTg > 1:688895/1‑250 (MQ=255) aTGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGAt < 1:801289/250‑1 (MQ=255) cGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGc < 1:764460/251‑1 (MQ=255) aaaTCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTg < 1:560182/237‑1 (MQ=255) aaaTCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGAtt < 1:679978/251‑1 (MQ=255) aTGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACt > 1:229453/1‑230 (MQ=255) cACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCttt > 1:798537/1‑251 (MQ=255) cTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCa > 1:784056/1‑251 (MQ=255) tCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTc < 1:568100/251‑1 (MQ=255) cccTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAgggg < 1:220560/251‑1 (MQ=255) cTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGaa > 1:439317/1‑251 (MQ=255) ccACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATc < 1:50347/248‑1 (MQ=255) gCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGAt > 1:757490/1‑203 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGt > 1:504779/1‑182 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGt > 1:831203/1‑182 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGc < 1:161068/188‑1 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGAt < 1:829866/198‑1 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTccc < 1:294732/227‑1 (MQ=255) gggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTa > 1:882953/1‑250 (MQ=255) ggTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTAc < 1:306714/250‑1 (MQ=255) gTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACa > 1:105371/1‑156 (MQ=255) gTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCg > 1:126612/1‑251 (MQ=255) ttCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGa < 1:175302/192‑1 (MQ=255) gCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGtt < 1:472561/250‑1 (MQ=255) tccttccATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCg > 1:477087/1‑251 (MQ=255) tCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATcc < 1:592095/251‑1 (MQ=255) cTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCa > 1:405989/1‑251 (MQ=255) aCGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAAt < 1:711031/251‑1 (MQ=255) gAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATg < 1:805631/123‑1 (MQ=255) aaGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTtaacggta > 1:654326/1‑251 (MQ=255) gAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTg > 1:154994/1‑251 (MQ=255) gTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGc > 1:756933/1‑240 (MQ=255) aaGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTACCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTatat < 1:454184/251‑1 (MQ=255) aCTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTta > 1:338228/1‑220 (MQ=255) tAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAAc < 1:133246/251‑1 (MQ=255) aaaTTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGAt < 1:564615/111‑1 (MQ=255) aaTTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGa < 1:86500/251‑1 (MQ=255) aTTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATcc < 1:584648/75‑1 (MQ=255) aTTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGAt > 1:246585/1‑251 (MQ=255) ctcAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATaaa > 1:588090/1‑251 (MQ=255) acaTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATAtt < 1:174875/233‑1 (MQ=255) acaTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCa > 1:365256/1‑251 (MQ=255) acaTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCa > 1:501945/1‑251 (MQ=255) caTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAAc > 1:2870/1‑244 (MQ=255) caTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCaa > 1:48409/1‑251 (MQ=255) caTAAAAAAGAAGAACAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCaa > 1:637721/1‑251 (MQ=255) gaaCAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCtt > 1:661549/1‑251 (MQ=255) aCAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAAc < 1:513232/230‑1 (MQ=255) cAGGATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGga > 1:488758/1‑251 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATcc > 1:349453/1‑166 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTc > 1:75103/1‑217 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAAcc < 1:558501/228‑1 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAAc < 1:187906/227‑1 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgaga > 1:755862/1‑251 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgaga > 1:695238/1‑251 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgaga > 1:301646/1‑251 (MQ=255) ggATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgag > 1:896401/1‑250 (MQ=255) gATAAGGAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgag < 1:147484/249‑1 (MQ=255) ggAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCt > 1:362086/1‑94 (MQ=255) ggAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAgg > 1:362435/1‑198 (MQ=255) ggAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAAtt < 1:824573/204‑1 (MQ=255) ggAATAACCTGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGgag > 1:615768/1‑244 (MQ=255) | GGCACGGTTATCGGGATTTTGTTGACCTTCTACCAAATCGGCCAATCCGGTGGTGAAGTAGATGCCGGTGAAATCATGCTGCACTTATCTTTGGCCCTAAAAGCCACCGCACTGGGTATTCTGGTGGCGATTCCTTCCATGATTTTCTATAACGCCTTGGGACGCAAAGTCGAAGTGAACCGTCTGAAGTGGAAAGTACTAAATTCTCAACAACATAAAAAAGAAGAACAGGATAAGGAATAACCCGTGAAAAAGTTTGATGAAATCAACATTATCCCGTTCATTGATATTATGTTGGTGCTACTTGCGATTGTGCTGATTACGGCATCTTTCATTTCCCAGGGGAAAATCCAAGTGAATGTACCGAAAGCCAGTTCTTCCGTCGCATTCAAATCCAATGAGTTGGCAAAATTGTTAACGGTAACGGCAAAAGGTGAATTATATTTCAACGATAAACCTACCAATCTTGAAAGCTTGGAGA > 1/488800‑489280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |