| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 326,141 | C→T | intergenic (‑41512/‑37186) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 326,141 | 0 | C | T | 100.0% | 244.2 / NA | 85 | intergenic (‑41512/‑37186) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (46/39); total (46/39) | |||||||||||
AATGGTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCTACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGCAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATCGGAGAGTAATT > 1/325895‑326385 | aaTGGTGCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTGCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGtaac < 1:694105/250‑1 (MQ=255) gTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg > 1:344638/1‑251 (MQ=255) gTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg > 1:154877/1‑251 (MQ=255) gTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg > 1:371213/1‑251 (MQ=255) gTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg > 1:268408/1‑251 (MQ=255) gTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg > 1:409734/1‑251 (MQ=255) ttCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACg < 1:858320/250‑1 (MQ=255) ggATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAAc > 1:563298/1‑249 (MQ=255) ccACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATc < 1:115981/251‑1 (MQ=255) aaTTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAAc < 1:406512/233‑1 (MQ=255) aaTTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCg > 1:468858/1‑250 (MQ=255) ttAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCAc > 1:24746/1‑246 (MQ=255) ttAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGccc < 1:345908/251‑1 (MQ=255) gTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTTTCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAg > 1:27262/1‑250 (MQ=255) tttGCGGTGGATACCTTTTAATAAATCGCCGGTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGACCCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAacac < 1:22015/251‑1 (MQ=255) gTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAAc < 1:39414/198‑1 (MQ=255) gTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGccc > 1:59456/1‑214 (MQ=255) gTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCg > 1:174942/1‑251 (MQ=255) gTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCg > 1:316582/1‑251 (MQ=255) tGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCgg < 1:227388/251‑1 (MQ=255) ccTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAacac > 1:191610/1‑238 (MQ=255) ccTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTac > 1:759019/1‑250 (MQ=255) ccTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTac > 1:745811/1‑250 (MQ=255) ttttAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTaccac < 1:450771/251‑1 (MQ=255) ttAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTAccacca < 1:526546/251‑1 (MQ=255) ataaATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATa > 1:394953/1‑251 (MQ=255) aaTCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCa < 1:333179/251‑1 (MQ=255) ccGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAc < 1:744368/251‑1 (MQ=255) cGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc < 1:493683/251‑1 (MQ=255) cGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc < 1:165170/251‑1 (MQ=255) cGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc < 1:86298/251‑1 (MQ=255) tAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAAc < 1:516323/168‑1 (MQ=255) gTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTgccgcc > 1:242479/1‑210 (MQ=255) gTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc > 1:691067/1‑246 (MQ=255) tAATGCCCGTTGCGGCAAACGCCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCGGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCt < 1:458329/251‑1 (MQ=255) tGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTAct < 1:384041/251‑1 (MQ=255) cacCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAg < 1:329242/168‑1 (MQ=255) cacCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCCGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAc < 1:444617/225‑1 (MQ=255) acCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAaaca > 1:139846/1‑251 (MQ=255) aTTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGACTGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATa > 1:439801/1‑251 (MQ=255) tcaCGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAc > 1:452818/1‑212 (MQ=255) ccGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAg < 1:795435/250‑1 (MQ=255) cGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGaa > 1:635444/1‑160 (MQ=255) cGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAg > 1:447874/1‑250 (MQ=255) ccAATTGTTCCAATTGCAATGCGGCGTACACTTCCACGCCCGTTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCCCCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATaaa < 1:704299/239‑1 (MQ=255) ccAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc > 1:416899/1‑206 (MQ=255) ccAATTGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTa > 1:592594/1‑251 (MQ=255) ttGTTCCAATTGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCACCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACAt < 1:698795/251‑1 (MQ=255) ttGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCacaac < 1:274009/162‑1 (MQ=255) ttGCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATaaaa > 1:463348/1‑227 (MQ=255) gCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGa > 1:93939/1‑251 (MQ=255) gCAATACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGa > 1:634291/1‑251 (MQ=255) aTACGGCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCggaagtagacatggtttatggt < 1:277424/251‑21 (MQ=255) ggCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAAcc > 1:255019/1‑109 (MQ=255) gCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTaaa > 1:726907/1‑251 (MQ=255) gCGTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTaa < 1:245824/250‑1 (MQ=255) gTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTActtc > 1:345412/1‑192 (MQ=255) gTTCACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATa > 1:781263/1‑251 (MQ=255) cACTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATAcg > 1:350100/1‑250 (MQ=255) cTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAcc > 1:414832/1‑176 (MQ=255) cTTCCACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCggaagtagacatggtttatgg < 1:783899/238‑20 (MQ=255) cATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCaa > 1:657755/1‑249 (MQ=255) cATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCaa > 1:28942/1‑249 (MQ=255) cATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACt < 1:565267/251‑1 (MQ=255) tttCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCg > 1:209883/1‑251 (MQ=255) tttCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCg > 1:650073/1‑251 (MQ=255) tttCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCg > 1:841938/1‑251 (MQ=255) ccTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGc > 1:798368/1‑140 (MQ=255) ccTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTAct > 1:384193/1‑170 (MQ=255) cgccAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGAc < 1:167330/251‑1 (MQ=255) ccAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACgg < 1:866644/251‑1 (MQ=255) gCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGCAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGttt > 1:699770/1‑251 (MQ=255) ttATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCCCCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATc < 1:238468/251‑1 (MQ=255) tATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATcc < 1:53004/251‑1 (MQ=255) tttCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAAt < 1:312473/223‑1 (MQ=255) tCCGGCGTGTCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGAc < 1:428462/251‑1 (MQ=255) tgtCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGac < 1:747311/250‑1 (MQ=255) tCGCCTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGacac < 1:121881/250‑1 (MQ=255) ccTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACTATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCAc > 1:363747/1‑212 (MQ=255) ccTTTCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTaa > 1:445431/1‑251 (MQ=255) ttCACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATc < 1:237146/251‑1 (MQ=255) cACCTGATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCa > 1:239913/1‑230 (MQ=255) gATCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATCgg < 1:47437/246‑1 (MQ=255) aTCACGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATCGGAGAGTa > 1:861926/1‑251 (MQ=255) aCGTGGTAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATCGGAGAGTAAtt < 1:540887/251‑1 (MQ=255) cGTGGTAACAAACGAACCTGCATATCCCCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAAc < 1:812641/92‑1 (MQ=255) | AATGGTTCTGGATTTACCACGAATTAATAAAGTTTCCGTTGTCGCCAAATTACCTTTGCGGTGGATACCTTTTAATAAATCGCCGTTAGTAATGCCCGTTGCGGCAAACACCAAATTATCATCACGCACCAATTGTTCCAATTGCAATACGGCGTTCACTTCTACGCCCATTTCCTGACAACGGCGAATTTCCTCCGCCGCCAAAGCGTTATTTTCCGGCGTGTCGCCTTTCACCTGATCACGTGGCAACAAACGAACCTGCATATCACCGCCCAGTGCGCGAATGGCAGCTGCCGCCACAACACCTTCCGGCGTACCACCAATACCATAAACCATGTCTACTTCCGCTTCCGGCAAACAACATAAAACGGAAGCGGTAACATCGCCGTCAGGAACGGTAAATACGCGTACACCCAACTCGTGCATTTTTTCAATCACCGCGCTATGACGGGGTTTATCCAAGACCATGACACTTAAATCGGAGAGTAATT > 1/325895‑326385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |