| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 322,720 | A→G | intergenic (‑38091/‑40607) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 322,720 | 0 | A | G | 100.0% | 208.0 / NA | 69 | intergenic (‑38091/‑40607) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (43/26); total (43/26) | |||||||||||
CTTTAATGAACAACCAAAATGCCGTGGTTATCGACTTACGCTCCATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGACATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAATTA > 1/322477‑322958 | cTTTAATGAACAACCAAAATGCCGTGGTTATCGACTTACGCTCCATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATcgg > 1:106360/1‑250 (MQ=255) aaaTGCCGTGGTTATCGACTTACGCTCCATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCaa < 1:363303/251‑1 (MQ=255) aTGCCGTGGTTATCGACTTACGCTCCATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAAt > 1:405855/1‑251 (MQ=255) ccATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAaaaataaaat > 1:482741/1‑251 (MQ=255) cATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAaaataaaata < 1:253169/251‑1 (MQ=255) ttGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAg < 1:605545/251‑1 (MQ=255) gTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAaataaaataa > 1:89052/1‑243 (MQ=255) gTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGa > 1:422310/1‑251 (MQ=255) ggCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCga > 1:333656/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGAcc < 1:897783/243‑1 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGAc < 1:481093/242‑1 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:262785/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:369354/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:508375/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:69106/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:182375/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:331589/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGAACGAAGaaaa > 1:580930/1‑251 (MQ=255) atCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAAAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGaaaa > 1:438860/1‑251 (MQ=255) gTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTg > 1:279014/1‑251 (MQ=255) aCATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAAc < 1:197923/251‑1 (MQ=255) ccTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAAc < 1:880446/250‑1 (MQ=255) cGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGaac < 1:566628/251‑2 (MQ=255) cGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAg < 1:193206/251‑1 (MQ=255) aaaaaCAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGAc > 1:583168/1‑206 (MQ=255) aaaCAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCgg > 1:155187/1‑251 (MQ=255) gtagccgtggttgcctaccttGAACCGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCgg < 1:883107/231‑1 (MQ=255) caacaaTATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCa < 1:339669/228‑1 (MQ=255) atatCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCaa < 1:577258/251‑1 (MQ=255) cGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTc < 1:652989/251‑1 (MQ=255) cGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTc < 1:35835/251‑1 (MQ=255) gAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCaa > 1:823388/1‑251 (MQ=255) aaaTTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTc > 1:128990/1‑246 (MQ=255) gCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATcgg > 1:180565/1‑117 (MQ=255) gCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAaaaataaaat > 1:177891/1‑160 (MQ=255) gCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGaa < 1:637460/214‑1 (MQ=255) gCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGtt < 1:861057/217‑1 (MQ=255) gCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCaa < 1:307995/232‑1 (MQ=255) ccGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAAc > 1:403281/1‑196 (MQ=255) aaTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAg > 1:299053/1‑251 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTAcc > 1:41646/1‑122 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAGCAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAg > 1:809089/1‑250 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCgg > 1:828321/1‑205 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTAtgt < 1:812067/230‑1 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAg > 1:728957/1‑250 (MQ=255) aTTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGCGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGa > 1:293995/1‑236 (MQ=255) aGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGa > 1:214312/1‑227 (MQ=255) cTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAAcc < 1:482337/251‑1 (MQ=255) gtgCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACGAACCAAGAACAGGAAGTTCAAGCGGTGTTGCaa > 1:452002/1‑203 (MQ=255) gtgCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCaa > 1:21301/1‑203 (MQ=255) ccGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCg < 1:110151/251‑1 (MQ=255) ccGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTg < 1:822082/218‑1 (MQ=255) cGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGa < 1:268937/251‑1 (MQ=255) cGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAAc < 1:3106/251‑1 (MQ=255) aCAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGAtt < 1:443380/251‑1 (MQ=255) gTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTAt > 1:737763/1‑249 (MQ=255) gTTTCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTAt > 1:785437/1‑249 (MQ=255) tttCAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGATCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCt < 1:419738/250‑1 (MQ=255) cAATCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCg > 1:83413/1‑251 (MQ=255) aTCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAAt > 1:432576/1‑148 (MQ=255) aTCATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGaa > 1:866209/1‑251 (MQ=255) cATGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGGAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGaaa > 1:878478/1‑250 (MQ=255) aTGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAAc > 1:101572/1‑250 (MQ=255) tGTTTATGTGCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGa > 1:705395/1‑246 (MQ=255) tgtgCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAAt < 1:130783/251‑1 (MQ=255) gtgCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAAtt > 1:557569/1‑251 (MQ=255) gtgCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAAtt > 1:675061/1‑251 (MQ=255) tgCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCaa > 1:528584/1‑134 (MQ=255) tgCTAAGAGAAGGCATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAATTa > 1:529069/1‑251 (MQ=255) | CTTTAATGAACAACCAAAATGCCGTGGTTATCGACTTACGCTCCATTGATGAGTTTAACAAAGGCCATATCATAAACAGTTTAAACATCCTGCCTTCCGAAATTAAAAACAACAATATCGGAAAAATTGAACAGCACAAAGACATTCCGGTAATTTTAGCCTGTGCCGATTTCGTTTCTTCCCGTTCTTCCGGTGAAATTCTGGCAAAACAAGGTTTCAATCATGTTTATGTGCTAAGAGAAGACATCGGCGGCTGGCGTGCAGCAAATTTACCTTTAGTTAAAAAATAAAATAAGGACTCGAAAATGACCGAAGAAAACAAAGAAGTGACAAACCAAGAACAGGAAGTTCAAGCGGTGTTGCAAATTCAACGCATTTATGTGAAAGACGTTTCTTTTGAAGCACCAAACCTACCGCATATTTTCAACCAAGAATGGAAACCGCGTTTAAGTTTTGATTTATCTACCGAAACCGCTAAATTA > 1/322477‑322958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |