| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,960,400 | C→T | intergenic (‑60657/–) | unknown ← / – | tRNA‑Met‑CAT/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,960,400 | 0 | C | T | 98.7% | 216.7 / NA | 74 | intergenic (‑60657/–) | unknown/– | tRNA‑Met‑CAT/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (39/34); minor base G (0/1); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGACCAACTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGAGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGACGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATACCTGAAAA > 1/1960163‑1960635 | cGACCACCTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATcc < 1:476712/251‑1 (MQ=255) aaCTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGCCCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGc < 1:2307/251‑1 (MQ=255) cTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCAt > 1:469739/1‑251 (MQ=255) cTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCAt < 1:732036/251‑1 (MQ=255) ccGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGa > 1:175206/1‑249 (MQ=255) gTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGaa > 1:456176/1‑251 (MQ=255) cTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGATTGTGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAAc < 1:845017/251‑1 (MQ=255) gTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATc < 1:842852/220‑1 (MQ=255) gTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTa > 1:686525/1‑251 (MQ=255) gTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTa > 1:338815/1‑251 (MQ=255) gTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTa > 1:257031/1‑251 (MQ=255) cAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata < 1:194419/251‑1 (MQ=255) cAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata < 1:812719/251‑1 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAAc < 1:857643/204‑1 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTc < 1:269360/218‑1 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTacac > 1:625281/1‑242 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCg > 1:477511/1‑250 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCg > 1:370809/1‑250 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCg > 1:327526/1‑250 (MQ=255) aT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCg > 1:400208/1‑250 (MQ=255) gtgtACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGCTGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAgg > 1:549219/1‑251 (MQ=255) gtgtACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata > 1:480951/1‑211 (MQ=255) gtgtACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAgg > 1:818584/1‑251 (MQ=255) gtgtACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAgg > 1:504786/1‑251 (MQ=255) gtgtACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAgg > 1:596986/1‑251 (MQ=255) cgccccgaccGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTacac < 1:156730/231‑1 (MQ=255) cgacccgaccGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata > 1:705107/1‑206 (MQ=255) acccgaccGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAggg > 1:564387/1‑245 (MQ=255) accGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATAAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata > 1:864481/1‑199 (MQ=255) gggCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGc < 1:394444/163‑1 (MQ=255) cGATTAAAAAATGGAGTCGCGCCTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGc < 1:185217/250‑1 (MQ=255) cGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGc < 1:596902/250‑1 (MQ=255) aaaaaTGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAAc < 1:266975/251‑1 (MQ=255) cgcgACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCgg > 1:375456/1‑251 (MQ=255) cgcgTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGcc < 1:850796/251‑1 (MQ=255) cGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTc < 1:385248/251‑1 (MQ=255) ttATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCg > 1:709103/1‑251 (MQ=255) tATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGa < 1:191697/251‑1 (MQ=255) tATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGa < 1:326100/251‑1 (MQ=255) aTTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata < 1:879714/141‑1 (MQ=255) atatCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCa < 1:619694/251‑1 (MQ=255) tatCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCat < 1:200535/251‑1 (MQ=255) aCCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATAtctc < 1:73063/251‑1 (MQ=255) aTCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGccc > 1:262890/1‑225 (MQ=255) tCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTacac < 1:810900/153‑1 (MQ=255) tCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGGCCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAg < 1:542453/221‑1 (MQ=255) tCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGa < 1:378957/234‑1 (MQ=255) tCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTa > 1:415249/1‑251 (MQ=255) tCCGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAAcc > 1:756815/1‑186 (MQ=255) ccGTGAATCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTacac < 1:135781/141‑1 (MQ=255) tCCTTTGAAACCTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTgcg > 1:77430/1‑251 (MQ=255) ccTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACg > 1:711614/1‑250 (MQ=255) ccTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACg > 1:485790/1‑250 (MQ=255) cTTGGGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGAGGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCGGGCGGTTTACACTGCTGCCGCAGGGATTGCCCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCt < 1:144244/251‑1 (MQ=255) agacggggTGCGGACGTTGTGGATCTGATGGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATTTTCCCGTCGGCAAGCTGGCGTTTTACACTGCTGCCGCAGGGATTGCCCCCGCCCGCGCCATTGCCGTGACCCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGACCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTac < 1:347507/244‑1 (MQ=255) gaTTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTacga > 1:93643/1‑250 (MQ=255) ggTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGCCTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGCCCCCGCCCGCGCCATTGCCGTGACCCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCgcgg < 1:246961/233‑1 (MQ=255) ggTGCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGAc > 1:209432/1‑132 (MQ=255) gCGGACGATGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCg < 1:655906/67‑1 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata < 1:776378/75‑1 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATc > 1:613669/1‑186 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGt > 1:545921/1‑200 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGaa > 1:167104/1‑251 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGaa > 1:366565/1‑251 (MQ=255) aTGTGGATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGaa > 1:222720/1‑251 (MQ=255) ggATCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATAc > 1:822992/1‑250 (MQ=255) gATCTGATTGGGGTGTCGGATGCGGAAGAACTCCTCGGCACCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTCCACTGCTGCCGCAGGGATTGCCCCCGCCCGCGCCTTTGCCGTGACCCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGa < 1:67789/245‑1 (MQ=255) aTCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATa < 1:262838/159‑1 (MQ=255) aTCTGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATAc > 1:18680/1‑248 (MQ=255) tGATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATACCTGaaa > 1:338025/1‑251 (MQ=255) gATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGata < 1:362268/65‑1 (MQ=255) gATTGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATACCTGaaaa > 1:646508/1‑251 (MQ=255) ttGTGGTGTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATAtc < 1:608451/183‑1 (MQ=255) gtggtgTCGGATGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTacgac > 1:549854/1‑222 (MQ=255) | CGACCAACTGCACAACCGCAACGAAGTGCTGTATTACAAACTGCTGACCGACCATTTGGCGGAAATGCTGCCGAT‑‑TGTGTACGACCCGACCGTGGGCGAAGCGATTAAAAAATGGAGTCGCGACTACCGCCGTTCGCGTGCGGTTTATTTGGATATCAACCATCCCGAAGCCATCCGTGAATCCTTTGAAACCTTGAGATTGGGTGCGGACGATGTGGATCTGATTGTGGTGTCGGACGCGGAAGAAATCCTCGGCATCGGCGACTGGGGCGTGAACGGTACAGATATTTCCGTCGGCAAGCTGGCGGTTTACACTGCTGCCGCAGGGATTGACCCCGCCCGCGCCATTGCCGTGAACCTTGATGTCGGCACAGATAACGAAGCCCTGCTCAGCGATCCCGCATATCTCGGTAACCGCCATGCCCGCGTGCGCGGCGAACGCTACGACGCGATGATTGCCGAATACCTGAAAA > 1/1960163‑1960635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |