Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,938,787	C→A	intergenic (‑39044/–)	unknown ← / –	tRNA‑Met‑CAT/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,938,787	0	C	A	100.0%	227.0 / NA	77	intergenic (‑39044/–)	unknown/–	tRNA‑Met‑CAT/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (36/41);  total (36/41)

GAAACATATTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGCTGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAGTTGAGTT  >  1/1938540‑1939021                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           gAAACATATTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTTCCGGCGTTTCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATgg                                                                                                                                                                                                                                         >  1:644759/1‑251 (MQ=255) gAAACATATTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATgg                                                                                                                                                                                                                                         >  1:734141/1‑251 (MQ=255)      atatTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCa                                                                                                                                                                                                                                    >  1:299024/1‑251 (MQ=255)      atatTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCa                                                                                                                                                                                                                                    >  1:264805/1‑251 (MQ=255)         ttCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGaa                                                                                                                                                                                                                                 <  1:416357/251‑1 (MQ=255)          tCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAg                                                                                                                                                                                                                                <  1:830491/251‑1 (MQ=255)                  cGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACGCACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTAt                                                                                                                                                                                                                        <  1:47696/251‑1 (MQ=255)                     aaaGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATgg                                                                                                                                                                                                                      <  1:100854/250‑1 (MQ=255)                         ccAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:347112/249‑1 (MQ=255)                         ccAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:493153/249‑1 (MQ=255)                         ccAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:42319/249‑1 (MQ=255)                                 gTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:630763/241‑1 (MQ=255)                                 gTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:863179/241‑1 (MQ=255)                                 gTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         >  1:565030/1‑251 (MQ=255)                                 gTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         >  1:715190/1‑251 (MQ=255)                                  tcatcaACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         <  1:833068/250‑1 (MQ=255)                                  tcatcaACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         <  1:753619/250‑1 (MQ=255)                                  tcatcaACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         <  1:389531/250‑1 (MQ=255)                                   catcaACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGc                                                                                                                                                                                                                     <  1:294859/237‑1 (MQ=255)                                      caACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGgcgc                                                                                                                                                                                                              <  1:649426/241‑1 (MQ=255)                                      caACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGt                                                                                                                                                                                                    <  1:582119/251‑1 (MQ=255)                                            aTGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGa                                                                                                                                                                                              >  1:877092/1‑251 (MQ=255)                                                   gTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCg                                                                                                                                                                                       >  1:408829/1‑251 (MQ=255)                                                              cgcTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACAccc                                                                                                                                                                             <  1:637255/250‑1 (MQ=255)                                                                    gAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGc                                                                                                                                                                                         <  1:796077/232‑1 (MQ=255)                                                                    gAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTgggt                                                                                                                                                                      >  1:266825/1‑250 (MQ=255)                                                                           aaCTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGatttattt                                                                                                                                                               <  1:801867/251‑1 (MQ=255)                                                                              tGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGc                                                                                                                                                            <  1:293077/251‑1 (MQ=255)                                                                                               gAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGaaatcct                                                                                                                                                                                                                        >  1:683461/1‑168 (MQ=255)                                                                                                 aTTGCCGGCGTTGCGTCGAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGAt                                                                                                                                         <  1:785277/251‑1 (MQ=255)                                                                                                      cGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACAt                                                                                                                                    <  1:132506/251‑1 (MQ=255)                                                                                                             gCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGa                                                                                                                                                                                              >  1:187189/1‑186 (MQ=255)                                                                                                                tCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAg                                                                                                                          <  1:823941/251‑1 (MQ=255)                                                                                                                    aaGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCt                                                                                                                      <  1:35/251‑1 (MQ=255)                                                                                                                          ccGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTacaac                                                                                                                 <  1:759581/250‑1 (MQ=255)                                                                                                                          ccGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTacaac                                                                                                                 <  1:489469/250‑1 (MQ=255)                                                                                                                          ccGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTacaac                                                                                                                 <  1:598057/250‑1 (MQ=255)                                                                                                                           cGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAg                                                                                                               <  1:820929/251‑1 (MQ=255)                                                                                                                                         aTTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCGGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGaa                                                                                                 >  1:758557/1‑251 (MQ=255)                                                                                                                                         aTTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAg                                                                                                                                                                                                                                <  1:798248/124‑1 (MQ=255)                                                                                                                                         aTTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         <  1:784482/147‑1 (MQ=255)                                                                                                                                         aTTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGcaacaa                                                                                                                                                                                                         >  1:879090/1‑147 (MQ=255)                                                                                                                                                aaGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAAccc                                                                                            <  1:220599/249‑1 (MQ=255)                                                                                                                                                  ggggAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCg                                                                                        >  1:227906/1‑251 (MQ=255)                                                                                                                                                   gggAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTAc                                                                                                                                      >  1:169159/1‑204 (MQ=255)                                                                                                                                                     gAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGtc                                                                                      <  1:251310/250‑1 (MQ=255)                                                                                                                                                                   ccTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGaaa                                                                       <  1:612546/251‑1 (MQ=255)                                                                                                                                                                   ccTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGaaa                                                                       >  1:623667/1‑251 (MQ=255)                                                                                                                                                                   ccTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGaaa                                                                       <  1:39261/251‑1 (MQ=255)                                                                                                                                                                     tCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAAc                                                                                              >  1:193603/1‑226 (MQ=255)                                                                                                                                                                     tCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAAt                                                                      >  1:57459/1‑250 (MQ=255)                                                                                                                                                                          gAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAAccc                                                                                            >  1:313405/1‑223 (MQ=255)                                                                                                                                                                          gAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATctccg                                                                 >  1:471734/1‑250 (MQ=255)                                                                                                                                                                           aacaacACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATctccgcc                                                               <  1:373495/251‑1 (MQ=255)                                                                                                                                                                             caacaCACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGa                                                                                                                                                                                                                                  >  1:42079/1‑86 (MQ=255)                                                                                                                                                                               acacacTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGcc                                                                                                                                                                                        <  1:2848/126‑1 (MQ=255)                                                                                                                                                                                    cTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCAtt                                                      >  1:750090/1‑251 (MQ=255)                                                                                                                                                                                            gAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTgccgccg                                               >  1:82993/1‑250 (MQ=255)                                                                                                                                                                                                 gTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACAt                                         >  1:3956/1‑251 (MQ=255)                                                                                                                                                                                                 gTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACAt                                         >  1:150692/1‑251 (MQ=255)                                                                                                                                                                                                  tttAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACAt                                                                                                                                    >  1:445690/1‑159 (MQ=255)                                                                                                                                                                                                      aCGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACAccc                                                                                                                                                                             >  1:518932/1‑114 (MQ=255)                                                                                                                                                                                                         gCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGca                                 >  1:659709/1‑251 (MQ=255)                                                                                                                                                                                                           aTTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGcaca                               >  1:772784/1‑251 (MQ=255)                                                                                                                                                                                                             tCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCacaac                             <  1:614895/251‑1 (MQ=255)                                                                                                                                                                                                              ccGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCacaaca                            >  1:186328/1‑251 (MQ=255)                                                                                                                                                                                                                   gTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTg                       >  1:680570/1‑251 (MQ=255)                                                                                                                                                                                                                      cATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGc                    <  1:815647/251‑1 (MQ=255)                                                                                                                                                                                                                      cATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACAGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGc                    <  1:839292/251‑1 (MQ=255)                                                                                                                                                                                                                                 aaGGTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAg         <  1:368166/251‑1 (MQ=255)                                                                                                                                                                                                                                   ggTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCAc                                                                                                                                                                                                                   <  1:376399/47‑1 (MQ=255)                                                                                                                                                                                                                                   ggTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAGtt       >  1:234925/1‑251 (MQ=255)                                                                                                                                                                                                                                   ggTTTCTTCCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAGtt       >  1:534377/1‑251 (MQ=255)                                                                                                                                                                                                                                        cttcCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAAcc                                                                                             <  1:330728/160‑1 (MQ=255)                                                                                                                                                                                                                                        cttcCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCgg                                   >  1:831299/1‑218 (MQ=255)                                                                                                                                                                                                                                        cttcCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCacaac                             >  1:485028/1‑224 (MQ=255)                                                                                                                                                                                                                                        cttcCAAACCAATCCGATGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAGTTGAGtt  >  1:692880/1‑251 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           GAAACATATTCTGCTGACGGAAAGCCAACACAGTCATCAACTGATGTTGCGTTTTGTGTTGCGCTCGGAAAGCAAACTGCCGCTGATCCGGCGGGAATTGCCGGCGTTGCGTCAAAAGCTGCCGCAACTTGCCGCTATTTTAGAAGGGGAAAAAGAGATTTTCCTCACGGAACAACACACTTTACCGGAATCGTTTAACGGCATTCCGCTGTTCATCCGCCCGCAAGGTTTCTTCCAAACCAATCCGCTGGTTGCAGAAGGATTGTATGGCACGGCGCAACAATGGGTTCAAGATCTGCCGATTAACACCCTTTGGGATTTATTTTGCGGTGTGGGCGGCTTCGGATTACATTGTTTACAAGCGCTACAACAGCGACATACGCAGAAAACCCTTCGTCTCACCGGCATTGAAATCTCCGCCTCCGCCATTGCCGCCGCCACATTATCGGCACAACAGCTTGGGCTTGCCGAACAGTTGAGTT  >  1/1938540‑1939021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑