| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,927,744 | T→C | intergenic (‑28001/–) | unknown ← / – | tRNA‑Met‑CAT/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,927,744 | 0 | T | C | 100.0% | 270.1 / NA | 93 | intergenic (‑28001/–) | unknown/– | tRNA‑Met‑CAT/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/49); total (44/49) | |||||||||||
AACCATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGTGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCACGATACGGTGAAAG > 1/1927502‑1927970 | aaCCATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTg < 1:627417/250‑1 (MQ=255)aaCCATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTg > 1:849988/1‑250 (MQ=255) ccATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCgg > 1:720027/1‑251 (MQ=255) ccATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCgg > 1:755449/1‑251 (MQ=255) ccATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCgg > 1:244696/1‑251 (MQ=255) ccATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCgg > 1:622301/1‑251 (MQ=255) ccATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCgg > 1:196461/1‑251 (MQ=255) ataataTTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGa < 1:93376/251‑1 (MQ=255) gCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATgg > 1:228345/1‑251 (MQ=255) aaaaaaTATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCa < 1:260651/251‑1 (MQ=255) aaaaaaTATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCa < 1:226834/251‑1 (MQ=255) aaaTATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACa > 1:16566/1‑251 (MQ=255) gTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa < 1:325850/250‑1 (MQ=255) gTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa < 1:500538/250‑1 (MQ=255) tGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACAt < 1:413815/251‑1 (MQ=255) ggTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa > 1:422283/1‑244 (MQ=255) ggTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATggg > 1:170864/1‑250 (MQ=255) tttAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCAc < 1:155050/251‑1 (MQ=255) aCGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCa < 1:567530/251‑1 (MQ=255) aCGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCa < 1:367299/251‑1 (MQ=255) cGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAAcc < 1:844674/251‑1 (MQ=255) cAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCaa < 1:734199/212‑1 (MQ=255) cAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGc > 1:59700/1‑228 (MQ=255) tCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAgatgat < 1:342766/251‑1 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCAc < 1:19900/220‑1 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATa > 1:405954/1‑251 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATa > 1:706379/1‑251 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATa > 1:281839/1‑251 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATa > 1:515697/1‑251 (MQ=255) cTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAACCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATa > 1:448207/1‑251 (MQ=255) aaCTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTa > 1:678626/1‑251 (MQ=255) tAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACAt < 1:808152/251‑1 (MQ=255) tAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACAt < 1:817172/251‑1 (MQ=255) aCCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGTCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAg < 1:762317/251‑1 (MQ=255) cccGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAggg > 1:15952/1‑215 (MQ=255) gCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCAc < 1:311589/204‑1 (MQ=255) gCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTcc > 1:205914/1‑250 (MQ=255) gCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACgg > 1:799644/1‑234 (MQ=255) cACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAAc < 1:627622/249‑1 (MQ=255) cTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATAc > 1:169651/1‑170 (MQ=255) cTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCAc > 1:901320/1‑196 (MQ=255) cTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAggg < 1:241896/204‑1 (MQ=255) cgcCCAAAGCAAGCTGAGGAAAACCCAAAAATTGGCATAAAAACCCCAACCACATGGCCAACCGAAAAAGAAAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACgg < 1:894791/219‑1 (MQ=255) gcCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATgg > 1:410464/1‑162 (MQ=255) gcCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTaa > 1:777062/1‑251 (MQ=255) cccAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACAt < 1:274453/167‑1 (MQ=255) cAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAatat < 1:566135/251‑1 (MQ=255) aaaGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACAt > 1:385584/1‑220 (MQ=255) caagcTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGa < 1:506534/251‑1 (MQ=255) aagcTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAat < 1:92247/243‑1 (MQ=255) agcTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTg < 1:45723/183‑1 (MQ=255) aaCCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCAttttt < 1:468431/251‑1 (MQ=255) aCCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCAc < 1:267398/162‑1 (MQ=255) cccAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTAc < 1:174296/251‑1 (MQ=255) gAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa > 1:406365/1‑148 (MQ=255) gAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAggg > 1:410589/1‑165 (MQ=255) gCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGAtt < 1:265181/250‑1 (MQ=255) tAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACgg < 1:504877/182‑1 (MQ=255) tAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGACAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCa > 1:444458/1‑251 (MQ=255) aacaacCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAAc < 1:173342/197‑1 (MQ=255) caacCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCAt < 1:880210/249‑1 (MQ=255) acCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAAc < 1:556895/175‑1 (MQ=255) acCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATtaat < 1:370802/251‑1 (MQ=255) ccccAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa > 1:692919/1‑132 (MQ=255) cAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACAt > 1:271936/1‑179 (MQ=255) cAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAAc < 1:864118/251‑1 (MQ=255) ccACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATtaat < 1:538796/244‑1 (MQ=255) ccACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTg > 1:855079/1‑250 (MQ=255) ggCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATaa > 1:34197/1‑120 (MQ=255) gAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGt > 1:568852/1‑251 (MQ=255) gAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAAt < 1:690362/250‑1 (MQ=255) gAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATa > 1:340268/1‑251 (MQ=255) atataAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAata > 1:532806/1‑166 (MQ=255) atataAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAAc < 1:211584/209‑1 (MQ=255) atataAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAgg < 1:876935/243‑1 (MQ=255) atataAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCa > 1:139691/1‑251 (MQ=255) aaaTGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAAt > 1:65835/1‑215 (MQ=255) aaaTGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCAccc > 1:388415/1‑250 (MQ=255) aaTGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAAc < 1:334383/83‑1 (MQ=255) aaTGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAAc > 1:273996/1‑124 (MQ=255) aaTGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCa > 1:587763/1‑251 (MQ=255) cAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCg < 1:806421/250‑1 (MQ=255) ggcggcACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACAt > 1:704501/1‑122 (MQ=255) gcACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATc < 1:901195/155‑1 (MQ=255) gcACAAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGa > 1:139325/1‑175 (MQ=255) cacaAGAAGCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCACGAt < 1:588777/251‑1 (MQ=255) aagaagCGGCGGCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAAc > 1:740573/1‑186 (MQ=255) cggcggCAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCACGATACGGTGa < 1:550261/249‑1 (MQ=255) gcggcAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCACGATACGGTGAAAg < 1:595360/250‑1 (MQ=255) gcAATTAATAAGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCa < 1:291054/233‑1 (MQ=255) taataaGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAAc < 1:467847/108‑1 (MQ=255) taataaGCCGATTTGCGCCGTTGCGGGATACCATGGCAACATCAACAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAata < 1:575860/127‑1 (MQ=255) gATTTGCGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAAc > 1:301631/1‑99 (MQ=255) | AACCATAATATTGCAAAAAATATTGGTTGCAGGTTTAACGCAAAAACACGAAAACAAAAATATTCTTTATAACTTAACCCGCCCAGCACTAAAAACGCCGCGCCCAAAGCAAGCTGAGGAAAACCCAGAATTTGGCATAACAACCCCAACCACATGGCGAACTGAAAAAGATAACGGAAATTTTTCATATATAAATGCACGCAGGCGGCACAAGAAGCGGCGGCAATTAATAAGCCGATTTGTGCCGTTGCGGGATACCATGGCAACATCAATAACATGGGCACCGCAAGGGTGAAACCCGAACGATAGATGATAACGGTAACATAGTCCCAAACATCCATATGGGATTTAATATGTGGATCAGCCATTTTTACTCCTTAGATTATCATTAATAAACTGCATGGAATCGGGCGTAACTTCCAAAATAGAGGAAGTTTCACCCCAATCACCGAGCACGATACGGTGAAAG > 1/1927502‑1927970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |