| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,906,057 | T→C | intergenic (‑6314/–) | unknown ← / – | tRNA‑Met‑CAT/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,906,057 | 0 | T | C | 100.0% | 219.3 / NA | 76 | intergenic (‑6314/–) | unknown/– | tRNA‑Met‑CAT/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (29/47); total (29/47) | |||||||||||
ACGGCGAGTTATTGGCGCAAAGCACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTTGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAATTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCCCAATTGAGCG > 1/1905822‑1906293 | aCGGCGAGTTATTGGCGCAAAGCACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCtt < 1:328486/251‑1 (MQ=255) gTTATTGGCGCAAAGCACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCcagca > 1:256952/1‑251 (MQ=255) gCACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTAttt > 1:706494/1‑250 (MQ=255) cACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTc < 1:566957/250‑1 (MQ=255) cGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATc < 1:832080/251‑1 (MQ=255) gATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCATCCATTATCg > 1:180512/1‑251 (MQ=255) tatGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGa > 1:55752/1‑250 (MQ=255) gcgcAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTAttt < 1:258039/231‑1 (MQ=255) gTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCatt < 1:557333/222‑1 (MQ=255) gTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATc < 1:520217/240‑1 (MQ=255) gTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGt > 1:117085/1‑251 (MQ=255) gTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGt > 1:282209/1‑251 (MQ=255) gTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGATTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGt > 1:269215/1‑251 (MQ=255) ttATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTAttt < 1:864454/224‑1 (MQ=255) ttATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTAt < 1:248049/251‑1 (MQ=255) aTTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTc < 1:546395/251‑1 (MQ=255) aTTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTc < 1:852653/251‑1 (MQ=255) ggATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCAtg > 1:271863/1‑245 (MQ=255) aaaaaGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACg < 1:76053/226‑1 (MQ=255) tCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACaaaac < 1:811432/251‑2 (MQ=255) cccAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACaaaa > 1:389972/1‑249 (MQ=255) aaaTTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCAtg < 1:415594/210‑1 (MQ=255) aaaTTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGCATTGCGCAACACAACTACGCaa > 1:263892/1‑251 (MQ=255) ttGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACaaaactctatctctt > 1:661576/1‑240 (MQ=255) ttGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACaaaac < 1:574305/241‑2 (MQ=255) ttGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAAt > 1:603895/1‑249 (MQ=255) aaCCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:784737/250‑1 (MQ=255) aaCCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:192359/250‑1 (MQ=255) aaCCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:435878/250‑1 (MQ=255) aaCCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:493301/250‑1 (MQ=255) aCCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTa < 1:145534/251‑1 (MQ=255) cccATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGc < 1:97569/238‑1 (MQ=255) cATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGc > 1:208163/1‑143 (MQ=255) cATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCAtgtg < 1:894356/199‑1 (MQ=255) cATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAgt < 1:280149/251‑1 (MQ=255) cATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAAGACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCattat < 1:868278/163‑1 (MQ=255) aTTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAgtt < 1:146936/251‑1 (MQ=255) tttATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATAATTTCCTc < 1:847791/167‑1 (MQ=255) gCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTtcat > 1:514717/1‑250 (MQ=255) ccGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTtcatc < 1:333420/250‑1 (MQ=255) gAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCAtg < 1:880059/185‑1 (MQ=255) aaCGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGc < 1:708222/250‑1 (MQ=255) gCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:784347/229‑1 (MQ=255) gCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACg > 1:50571/1‑250 (MQ=255) gCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACg > 1:185573/1‑250 (MQ=255) aaGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAg < 1:146354/250‑1 (MQ=255) aaGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAg < 1:605574/250‑1 (MQ=255) ggTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTgcgc < 1:515658/198‑1 (MQ=255) ggTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAg < 1:581991/248‑1 (MQ=255) tCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAAt < 1:856544/251‑1 (MQ=255) cTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATa < 1:636828/251‑1 (MQ=255) tGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAg < 1:404718/251‑1 (MQ=255) aCCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGt > 1:253987/1‑251 (MQ=255) ccTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACAcc > 1:318919/1‑172 (MQ=255) ccTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:549676/205‑1 (MQ=255) ccTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAAt > 1:403012/1‑240 (MQ=255) aaaTACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGttttt < 1:267453/251‑1 (MQ=255) aagcaaaATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCTGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATg < 1:3158/172‑1 (MQ=255) aagcaaaATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTtca > 1:241924/1‑186 (MQ=255) aagcaaaATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGa > 1:6951/1‑251 (MQ=255) tcaatcaTATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAaca < 1:139732/251‑1 (MQ=255) atcaTATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTgcgc < 1:57709/140‑1 (MQ=255) tCGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg > 1:664416/1‑150 (MQ=255) cGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCAtg < 1:93728/100‑1 (MQ=255) cGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGtt < 1:238508/203‑1 (MQ=255) cGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACaaa > 1:834889/1‑251 (MQ=255) cGTTTATACGGCGAGATTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATATGGTGGAAAAAACACCGGTATTgcgc < 1:493491/126‑1 (MQ=255) gaTTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAg < 1:773269/135‑1 (MQ=255) gaTTATTATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCTCAATTg > 1:704279/1‑251 (MQ=255) attattATCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCTCAATTg < 1:49703/250‑1 (MQ=255) ttattaTCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAAt < 1:70780/222‑1 (MQ=255) ttattaTCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATaaa > 1:75886/1‑229 (MQ=255) ttattaTCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCTCAATTGAg > 1:623998/1‑251 (MQ=255) ttattaTCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCTCAATTGAg > 1:471533/1‑251 (MQ=255) attatCGTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTCTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCTCAATTGAGCg > 1:843015/1‑251 (MQ=255) gTCTTCCTCGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAACTACGCAATCTATGAGTAAGTTGTTTCATCAGCGa > 1:777081/1‑144 (MQ=255) | ACGGCGAGTTATTGGCGCAAAGCACCAATTCGTCCGATATGCGCAGTTTATTGGGGCTGGATAAAAAAGAAGAAAATGAAAAGGATTCCCAGCAAATTGTGGAACCCATTTATTCGCCGAACGGCGTGGAAGGTTTTCTGCGCGTGACCTTTGATGCCAAATACGGACAAACCACGCAAAGCAAAATCAATCATATTTTTCATCGTTTATACGGCGAGATTATTATCGTCTTCCTTGCCGGGATCCTGCTTGCCAGCAGCCTGCATTATTTCCTCAGCCATTATCGACGTAGCCGTATTCATGTGGTGGAAAAAACACCGGTATTGCGCAACAAAATTACGCAATCTATGAGTAAGTTGTTTCATCAGCGACGCAGAAGGGTGAAATAGGGAAAAGTGCGGTGGTTTTTCCCGGCGTTTTTTCATCGGAAATAAACACAATTGATAAAAACAAAAAACCGCCCAATTGAGCG > 1/1905822‑1906293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |