| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,897,821 | C→A | intergenic (+6591/+1846) | unknown → / ← unknown | tRNA‑Cys‑GCA/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,897,821 | 0 | C | A | 100.0% | 234.0 / NA | 80 | intergenic (+6591/+1846) | unknown/unknown | tRNA‑Cys‑GCA/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (34/46); total (34/46) | |||||||||||
AGGAACCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGCCACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTCCGCTTGTTTTTCTACGATAAATTGACC > 1/1897575‑1898061 | aggaACCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGacac < 1:529024/250‑1 (MQ=255) aCCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTc > 1:831641/1‑249 (MQ=255) aCCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTc > 1:522661/1‑249 (MQ=255) aCCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTc > 1:609450/1‑249 (MQ=255) tACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACg > 1:666196/1‑251 (MQ=255) tACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACg > 1:192471/1‑251 (MQ=255) aTGTACCCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGc < 1:485108/247‑1 (MQ=255) aTGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCAt > 1:8524/1‑251 (MQ=255) aTGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCAt > 1:506755/1‑251 (MQ=255) aTGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCAt > 1:197544/1‑251 (MQ=255) gTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTa > 1:648973/1‑251 (MQ=255) taccccGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAg < 1:496364/248‑1 (MQ=255) taccccGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAg < 1:74462/248‑1 (MQ=255) taccccGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAg < 1:736593/248‑1 (MQ=255) taccccGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAg < 1:494876/248‑1 (MQ=255) tAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGAGAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAg < 1:445902/251‑1 (MQ=255) ccccGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAggg < 1:540064/250‑1 (MQ=255) ccACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGttt > 1:663843/1‑250 (MQ=255) ttGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGACGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCg < 1:611632/251‑1 (MQ=255) ttACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATg < 1:163768/251‑1 (MQ=255) aCCCGGTTGCATGAAATCTTCGAGGGTACCCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCGCGGCTCATTAGGGCCTGTTTCATCGTATGATGAg < 1:692498/251‑1 (MQ=255) tGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATcc < 1:897618/251‑1 (MQ=255) cTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAATCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCaaata > 1:347676/1‑240 (MQ=255) gggTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCGGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCg > 1:438866/1‑219 (MQ=255) ccGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCa > 1:172723/1‑251 (MQ=255) gtgtACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCAcc > 1:57327/1‑250 (MQ=255) aCCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCAc < 1:513321/245‑1 (MQ=255) aCCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCa > 1:180417/1‑251 (MQ=255) gggCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGtttt > 1:173369/1‑251 (MQ=255) ggCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTCCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGc > 1:809883/1‑209 (MQ=255) aaaTCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCt > 1:656401/1‑154 (MQ=255) cGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTgg < 1:240806/251‑1 (MQ=255) cGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTgg < 1:552565/251‑1 (MQ=255) tGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGt < 1:707429/250‑1 (MQ=255) ccGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAAcccc < 1:413982/251‑1 (MQ=255) caTTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGc > 1:525171/1‑145 (MQ=255) caTTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGt > 1:751086/1‑238 (MQ=255) caTTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTtta > 1:726091/1‑251 (MQ=255) aTTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTtta‑t > 1:495959/1‑251 (MQ=255) tAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTtta‑tta < 1:232753/251‑1 (MQ=255) tAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTtta‑tta < 1:715600/251‑1 (MQ=255) cATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATg < 1:178545/251‑1 (MQ=255) cATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATg < 1:266990/251‑1 (MQ=255) cATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATg < 1:29326/251‑1 (MQ=255) aTGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTc > 1:135879/1‑248 (MQ=255) tGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGa > 1:298915/1‑251 (MQ=255) tGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGa < 1:173364/251‑1 (MQ=255) tAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGttt > 1:596012/1‑191 (MQ=255) tAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAAccc > 1:746732/1‑229 (MQ=255) tAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGa > 1:648059/1‑251 (MQ=255) gaaCCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCa > 1:489812/1‑250 (MQ=255) ccATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATg > 1:597913/1‑140 (MQ=255) aTCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTg > 1:602915/1‑251 (MQ=255) tCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGcc < 1:493856/120‑1 (MQ=255) cGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGaa > 1:59462/1‑251 (MQ=255) ttAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAAt < 1:643887/250‑1 (MQ=255) aaaTAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCg < 1:844158/114‑1 (MQ=255) aaCATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATag > 1:334023/1‑245 (MQ=255) tatTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAAt > 1:399423/1‑251 (MQ=255) atTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCa > 1:212091/1‑228 (MQ=255) tttCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATcc < 1:162903/251‑1 (MQ=255) tttCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATcc < 1:555153/251‑1 (MQ=255) cgTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTAc < 1:181536/165‑1 (MQ=255) tCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTATTTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAg < 1:30309/251‑1 (MQ=255) ccGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCa < 1:764924/251‑1 (MQ=255) ccGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCa < 1:464489/251‑1 (MQ=255) ccGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCa < 1:242364/251‑1 (MQ=255) ccGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCa < 1:466499/251‑1 (MQ=255) aTCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTg < 1:803932/132‑1 (MQ=255) cAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTggg < 1:389716/251‑1 (MQ=255) cAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTgg < 1:553159/153‑1 (MQ=255) cAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATg < 1:760331/173‑1 (MQ=255) cAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTc < 1:427887/250‑1 (MQ=255) cAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTc < 1:63722/250‑1 (MQ=255) aaTGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTtta‑tta < 1:54211/169‑1 (MQ=255) aTGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTCCGc < 1:305963/251‑1 (MQ=255) tcttcAGACGCAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTgg < 1:558390/136‑1 (MQ=255) cAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTCCGCTTGTTTTTCTACGATAAATTGAcc < 1:613676/250‑1 (MQ=255) cAAAGCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTCCGCTTGTTTTTCTACGATAAATTGAcc < 1:150350/250‑1 (MQ=255) gCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAAccc < 1:202952/129‑1 (MQ=255) gCCTGACACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATaaaa < 1:193614/185‑1 (MQ=255) | AGGAACCATACACGATGTAACCCGCCGCCACTTGGCGATTACCCGGTTGCATGAAATCTTCGAGGGTAACCGGTGTACCAACGGGCGATACACGGCGATAAATAGAAAAAATCGTGCCGACCGCCACATTAACATCAATGTTAGAAGAACCATCCAATGGATCCGTTAAAATAACATATTTCGCGTTACGACCGCGTTCCGTATCAAAAGCAATGAAATTTTCCTCTTCTTCAGACGCAAAGCCTGCCACTTCCTCACGGCTCATTAGGGCCTGTTTCATCGTATTATGAGCAAATAAATCCAATTTCATTTGCGCTTCACCCTGCACGTTTTGCACGCCTGAATTACCGATAATGTCATTGGTTAACCCCGCTTTA‑TTAATGTCACGATGAACCACTTTTGCCACGAGGCGAATAGAAGATAAAATCCCGCTCAATTCTCCTTTAGCATGTGGGTATTCCGCTTGTTTTTCTACGATAAATTGACC > 1/1897575‑1898061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |