Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,889,722	T→C	intergenic (‑6004/‑1351)	unknown ← / → unknown	tRNA‑Ser‑TGA/tRNA‑Gly‑GCC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,889,722	0	T	C	100.0%	179.6 / NA	60	intergenic (‑6004/‑1351)	unknown/unknown	tRNA‑Ser‑TGA/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/32);  total (28/32)

GCAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATTAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACTTTCATCC  >  1/1889486‑1889964                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                   gCAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAg                                                                                                                                                                                                                                       >  1:785132/1‑250 (MQ=255)  cAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAg                                                                                                                                                                                                                                       >  1:264460/1‑249 (MQ=255)  cAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGc                                                                                                                                                                                                                                      <  1:36016/250‑1 (MQ=255)  cAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGc                                                                                                                                                                                                                                      <  1:899294/250‑1 (MQ=255)                  aaGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTAc                                                                                                                                                                                                                     <  1:681789/251‑1 (MQ=255)                         gcgAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATc                                                                                                                                                                                                               <  1:13624/250‑1 (MQ=255)                           gAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCg                                                                                                                                                                                                             >  1:109630/1‑250 (MQ=255)                                tttCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGc                                                                                                                                                                                                                           <  1:68136/231‑1 (MQ=255)                                 ttCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAatttattt                                                                                                                                                                                                                                          >  1:390443/1‑215 (MQ=255)                                 ttCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATc                                                                                                                                                                                                               >  1:517764/1‑242 (MQ=255)                                            ttCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACAt                                                                                                                                                                                           <  1:268297/251‑1 (MQ=255)                                                   tCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTAcc                                                                                                                                                                                                                    >  1:723928/1‑219 (MQ=255)                                                                     aaTACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCa                                                                                                                                                                                                                   <  1:698159/202‑1 (MQ=255)                                                                                cTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTgg                                                                                                                                                       <  1:612200/251‑1 (MQ=255)                                                                                   cacaATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGTAAACGCCTGTAcc                                                                                                                                                                                                                    <  1:190818/187‑1 (MQ=255)                                                                                        tGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACcg                                                                                                                                               <  1:477183/251‑1 (MQ=255)                                                                                               ccATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCaa                                                                                                                                        <  1:274792/251‑1 (MQ=255)                                                                                                          gTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGc                                                                                                                                                                                                                                 >  1:578261/1‑151 (MQ=255)                                                                                                          gTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATAc                                                                                                                                                 <  1:559399/231‑1 (MQ=255)                                                                                                                tCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGa                                                                                                                       <  1:637012/251‑1 (MQ=255)                                                                                                                 cACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGaa                                                                                                                      >  1:581021/1‑251 (MQ=255)                                                                                                                       gCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCa                                                                                                                >  1:499663/1‑251 (MQ=255)                                                                                                                        cATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATcc                                                                                                                 <  1:315016/249‑1 (MQ=255)                                                                                                                                   aaaaTTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAg                                                                                                    <  1:279960/251‑1 (MQ=255)                                                                                                                                                   gCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGAt                                                                                                                                                   >  1:135512/1‑188 (MQ=255)                                                                                                                                                   gCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATAc                                                                                                                                                 <  1:73255/190‑1 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGattat                                                                                                                                                          >  1:9104/1‑178 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCAtgtg                                                                                                            >  1:124145/1‑224 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCAtgtg                                                                                                            >  1:623284/1‑224 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGt                                                                                                   <  1:731443/233‑1 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGaa                                                                                 >  1:901781/1‑251 (MQ=255)                                                                                                                                                      gTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGaa                                                                                 >  1:7861/1‑251 (MQ=255)                                                                                                                                                                 cAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACcg                                                                                                                                               <  1:556851/178‑1 (MQ=255)                                                                                                                                                                  aaTTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGa                                                                                                                       <  1:863250/201‑1 (MQ=255)                                                                                                                                                                       aCTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAAc                                                                               <  1:216556/236‑1 (MQ=255)                                                                                                                                                                       aCTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCaa                                                                >  1:148002/1‑251 (MQ=255)                                                                                                                                                                       aCTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCaa                                                                >  1:426664/1‑251 (MQ=255)                                                                                                                                                                          ctaagttgttgcGGTCATTGCTTTTGGTGCTATTTCCTTCAACTTTCTTTTTACCCTCCAGTTATGTCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCAACATTTTCCAAACCGACAGCGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGTTCTGCTTCCGGAATATCCATGTGGGTTTGTTTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGc                                                             <  1:227790/240‑1 (MQ=255)                                                                                                                                                                                              cTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAAt                                         <  1:209889/251‑1 (MQ=255)                                                                                                                                                                                                    gTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAatttattt                                                                                                                                                                                                                                          <  1:70141/52‑1 (MQ=255)                                                                                                                                                                                                    gTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAAt                                    <  1:674027/250‑1 (MQ=255)                                                                                                                                                                                                      gCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTg                                                                                                      <  1:648009/182‑1 (MQ=255)                                                                                                                                                                                                      gCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAAc                                                                               >  1:153692/1‑205 (MQ=255)                                                                                                                                                                                                      gCTATATACTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCg                                  >  1:895055/1‑250 (MQ=255)                                                                                                                                                                                                         atataCTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTAc                                                                                                                                                                                                                     >  1:243116/1‑68 (MQ=255)                                                                                                                                                                                                         atataCTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCt                                                            <  1:356786/221‑1 (MQ=255)                                                                                                                                                                                                           ataCTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATcc                                                                                                                 >  1:66387/1‑166 (MQ=255)                                                                                                                                                                                                           ataCTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATc                                            >  1:491587/1‑235 (MQ=255)                                                                                                                                                                                                           ataCTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCa                            >  1:426/1‑251 (MQ=255)                                                                                                                                                                                                              cTGCAACTTTCATTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCg                                  <  1:255225/242‑1 (MQ=255)                                                                                                                                                                                                                         aTTTTACCCTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGAt                                                                                                                                                   >  1:680602/1‑118 (MQ=255)                                                                                                                                                                                                                               cccTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACtt        <  1:649839/251‑1 (MQ=255)                                                                                                                                                                                                                                ccTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACttt       >  1:542348/1‑251 (MQ=255)                                                                                                                                                                                                                                 cTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACttt       >  1:687035/1‑250 (MQ=255)                                                                                                                                                                                                                                 cTCCAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACttt       >  1:359523/1‑250 (MQ=255)                                                                                                                                                                                                                                   ccAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTggg                                                                                                          <  1:881814/149‑1 (MQ=255)                                                                                                                                                                                                                                    cAAATATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACTTTCATc   <  1:577632/251‑1 (MQ=255)                                                                                                                                                                                                                                     aaaTATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGa                                                                                                                       >  1:261690/1‑134 (MQ=255)                                                                                                                                                                                                                                     aaaTATATCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACTTTCATcc  <  1:845672/251‑1 (MQ=255)                                                                                                                                                                                                                                         atatCAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAAcc              <  1:383217/235‑1 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                   GCAATAATTTTTACTCCAAGTGCGGCGAGTTTTTCCAACACTTTTCTGCTTCCGTCATCATTCACGAAAATACATACGGCTTCACAATGTTCCGCCATTTTTGCCGTGCGCTCACTGAGCATGAAATCGTAAAATTCCAAATCCAAGCCGTATTTAGCATCAATTAACTCTAAATATTTTCGGTCATAACTTTTGGTGCTATATACTGCAACTTTCATTTTACCCTCCAAATATATTAAATTTATTTAAGCTGTGCAAACGCCTGTACCAGATCCGCTTTGATGTCTTCCACATTTTCCAAACCGACAGAGAAACGCAGCAGATTATTGGTGATACCGCGCGCAATGCGCTCTGCTTCCGGAATATCCATGTGGGTTTGAGTTGCCGGGTAAGTAATGAAACTTTCGGTACCGCCAAGGCTTTCGGCGAACGTAATCAATTTAATCGCCTTCAAGAACGTATTAACCCAACTTTCATCC  >  1/1889486‑1889964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑