| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 291,285 | A→G | intergenic (‑6656/‑72042) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 291,285 | 0 | A | G | 100.0% | 186.5 / NA | 71 | intergenic (‑6656/‑72042) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (44/27); total (44/27) | |||||||||||
CAAGTGGTTGGTCGGCTCGTCCAGCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCACGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTGGGCAGCG > 1/291044‑291522 | atccaagtggttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAg < 1:2910‑M1/226‑1 (MQ=255)atccaagtggttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAg < 1:668774‑M1/226‑1 (MQ=255) tccaagtggttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGc < 1:632244‑M1/227‑1 (MQ=255) tggttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCaa < 1:754110‑M1/231‑1 (MQ=255) tggttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCaa < 1:2484‑M1/231‑1 (MQ=255) gttggtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc < 1:271758‑M1/229‑1 (MQ=255) gtcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑c > 1:732572‑M1/12‑250 (MQ=255) tcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑cc > 1:776562‑M1/11‑250 (MQ=255) tcggctcgtcCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCt > 1:90098‑M1/11‑251 (MQ=255) AAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGt > 1:858255‑M1/1‑251 (MQ=255) aaTTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTg > 1:890140/1‑251 (MQ=255) aTTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTgc < 1:759633/251‑1 (MQ=255) aTTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAACCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGCGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGCACG‑CCTTTTGCCAACTGAATGGTg > 1:850821/1‑250 (MQ=255) ttGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTg > 1:818557/1‑216 (MQ=255) ttGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAg > 1:562699/1‑251 (MQ=255) aTGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc > 1:208586/1‑201 (MQ=255) aTGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATgg > 1:415085/1‑229 (MQ=255) aTGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGactt > 1:779908/1‑247 (MQ=255) gcgcCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAgg > 1:667660/1‑238 (MQ=255) cgcCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTcgcccg > 1:68175/1‑251 (MQ=255) gCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCaat > 1:357022/1‑251 (MQ=255) cgcgCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGAAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGAt < 1:87072/251‑1 (MQ=255) ttttCGCCGCCGAAAAAAGAAGCAACCGGTTGATTCTCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGTTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATACCCCACCTGTACC‑CCTTTTGCCACCTGAATGGTCCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGt < 1:766860/251‑1 (MQ=255) aaaaaGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAAt > 1:636517/1‑159 (MQ=255) aaaaaGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTgc < 1:743507/195‑1 (MQ=255) aagaagCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCg > 1:61013/1‑251 (MQ=255) accgggTTGATTCCCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTTTTCCGTCTGTGGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCAAAATAGCCCACCTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTcc < 1:813471/247‑1 (MQ=255) ccGGTTAATTCTCTTTATCGCCGTAAACCGCAAATCCGCCCAAATAATCGGGCAGTTGTTTTTCCGTCTGTTGGGGGGCAATTTTTTGTAATTGCCGAAGGGCGTTTTGGTCGGCGCCCAAGGTATCCAATTGGTGCGGCGAGAAATGGCCCAACTGTCCG‑CCTTTTGCCAACTGTATGGTGCCGCCGGTAGGCGTTTTTTCTACCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTcccc < 1:513209/251‑1 (MQ=255) gTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcag > 1:346410/1‑250 (MQ=255) gTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcag > 1:574353/1‑250 (MQ=255) ttGATTCACTTTATCGCCGTGAAACGAAAACCCGCCCAAATAACCGCGCAGTTGCTGTTCCGTCTGTTGGGGGGCATTTTTTTGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATGGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcagc < 1:661145/250‑1 (MQ=255) tttCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTGGCGGGGAAATTTTTTGTAAATGCCACAGGGCGCTTGCGCCGGCGCGCAACGTATCCAATTGGTGCTGCGCAAAATAGCCCAACTGTCCG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGAc < 1:223766/250‑1 (MQ=255) aTTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcagc > 1:873055/1‑247 (MQ=255) ttATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGt > 1:43945/1‑167 (MQ=255) ccaatcccgccaaaataaccgggaggTTGCTGTTCCTTCTGTTGGGGGGAATTTTTTTGTAAATGCCACGGGGCGTTTTCGTCGGCGCGCAACGTATCAAATTGGGGCTGCGCGAAATAGCCCACCTGTCCG‑CCTTTTGCAAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAg < 1:218503/226‑1 (MQ=255) caactCCGCCAAAATAACCGCGCAGTTGCTGTTCCGTTTGTGGGGGGGAAATTTTTTGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTCCG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGa < 1:821241/247‑1 (MQ=255) cAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTTTGGCGGGGCATTTTTTTGTAAATGCCACAGGGCGTTTTCGTCGGCGCGCAACGTATCCAATTGGTGCGGCGCGAAATAGCCCACCTGTCCG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTGGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAg < 1:389104/250‑1 (MQ=255) taatCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCCACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGCTTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTACtttt > 1:784953/1‑251 (MQ=255) cAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTaaaa > 1:723963/1‑251 (MQ=255) gTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc > 1:554162/1‑98 (MQ=255) gTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑c > 1:692241/1‑108 (MQ=255) gTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAAtt > 1:798731/1‑251 (MQ=255) ttGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTaaaa > 1:69471/1‑248 (MQ=255) gTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCAc > 1:728719/1‑250 (MQ=255) cGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCa > 1:125907/1‑250 (MQ=255) gTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCa > 1:546077/1‑249 (MQ=255) gggCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc > 1:238438/1‑77 (MQ=255) tttGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTCCG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGTTTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCG‑TTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGc < 1:197690/251‑1 (MQ=255) tgaaaaTGCCACAGGGCGCTTGCGTCGGCGCGCAACTTATCAAATTGGTGCTGCGCAAAATAGCCCACCTTTCCC‑CCTTTTCCCATCAGAAGGGCGCCGCCGGTAGCCGCGATTCCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGcc < 1:897448/248‑1 (MQ=255) accccACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTCCG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCg < 1:507540/248‑1 (MQ=255) tgcacaggggCGCTTTGGTCGGCGCCCACCGTATCCAATGGGTGCTGCGGGAAATGGCCCACCTGT‑CGCCCTTTTGCAAACGGAAGGGTGCCGCGGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGa < 1:670113/244‑1 (MQ=255) tGCCACAGGGCGTTTTCGTCGGCGCGCACCGTATCAAATTGGTGCGGCGCAAAATACCCCAACTGTCCG‑CTTTTTGCCAACTGAATGGTGCCGCGGGTAGGCGCGTTTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGa < 1:514851/251‑1 (MQ=255) ccACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTccc > 1:131226/1‑156 (MQ=255) ccACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGc > 1:434806/1‑242 (MQ=255) ccACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAgg > 1:205899/1‑251 (MQ=255) gggCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGttt > 1:644195/1‑251 (MQ=255) gcgcTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGtttt > 1:653506/1‑250 (MQ=255) gtcgGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGAt > 1:353223/1‑121 (MQ=255) cgcgcAACGTCTCCATTGGGTGCTGCGCGAAATAGCCCACCTGTACG‑CCTTTTGCCAACTGAAGGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAAc < 1:490119/251‑1 (MQ=255) gcgcAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACg > 1:501503/1‑251 (MQ=255) cAACTTATCCAATTGGTGCTGCGCAAAATACCCCAACTGTCCC‑CTTTTTCCCAACTGAATGGTCCCGCCGGTAGGCGCGTTTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGt < 1:580383/251‑1 (MQ=255) cAACGTACCCAATTGGTGCGGCGCAAAATAGCCCACCTGTCCG‑CCTTTTCCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGt < 1:195651/251‑1 (MQ=255) aCGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTc > 1:477414/1‑128 (MQ=255) gTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTggg > 1:247605/1‑251 (MQ=255) tATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTggg > 1:555198/1‑250 (MQ=255) aTCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACggg > 1:323125/1‑244 (MQ=255) tCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTGGGCAg > 1:167269/1‑251 (MQ=255) cAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTcgcc < 1:179278/78‑1 (MQ=255) cAATTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTGGGCAGCg > 1:495263/1‑251 (MQ=255) aatgggTGCTGCGCAAAATACCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTcc < 1:616846/176‑1 (MQ=255) aaTTGGTGCTGCGCGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGAcc > 1:783609/1‑131 (MQ=255) | CAAGTGGTTGGTCGGCTCGTCCAGCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGCCGGAAAAAGAAGCAACCGGTTGATTCACTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCACGAAATAGCCCAACTGTACG‑CCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGACCAATGCGCGAGCCGGGCACCAGATTGAGTTTAATTTTACTTAAAATTTCCACCGCACTTTTTTCGCCCTCGCCGTAGCCTACCGAGGCGTTTTCCATCATTAATAACGGGTTGGGCAGCG > 1/291044‑291522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |