| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,831,684 | T→C | intergenic (+49784/+3700) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,831,684 | 0 | T | C | 100.0% | 211.1 / NA | 70 | intergenic (+49784/+3700) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (34/36); total (34/36) | |||||||||||
GATGTAATCCAGCAACTGACTCACCAGCACCGACGGCTCCCGCTCCTGATTATCGGCAATAGAACGACCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCGCGACGGGCGCGATCGCCTTTTAAGCGGTGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGGCGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACCACTTTGAACGGAATGGAGCGCATCGGCAACAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGATAATGGTTCGGATTTTCCTCCAACGCATTATTCATGACATCCGCCACCACATCCACGCCCAACGCGTCGCTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGTCGGATTACCTCTTTAATATAAAACAGGGTTTCATCGGTTTCCGCCGAGGAGGCGAAGAATTTATC > 1/1831437‑1831916 | gATGTAATCCAACAACTGACTCACCAGCACCGACGGCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGa > 1:27081/1‑251 (MQ=255) aTGTAATCCAACAACTGACTCACCAGCACCGACGGCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGaa > 1:523683/1‑251 (MQ=255) aTGTAATCCAACAACTGACTCACCAGCACCGACGGCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGaa > 1:372735/1‑251 (MQ=255) cAACTGACTCACCAGCACCGACGGCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAgc < 1:891037/251‑1 (MQ=255) cGGCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACaaa > 1:816794/1‑251 (MQ=255) gCTCCCGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACa < 1:528612/247‑1 (MQ=255) cccGTTCCTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAAtt > 1:671082/1‑250 (MQ=255) ccTGATTATCGGCGATGGAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTg > 1:525708/1‑251 (MQ=255) ggAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCAc > 1:332082/2‑231 (MQ=255) gAACGTCCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCggt < 1:252549/250‑3 (MQ=255) gtccGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAAt > 1:785030/3‑193 (MQ=255) gtccGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGAAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCggtagtga > 1:800790/3‑244 (MQ=255) ccGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCggtagtgatt < 1:151457/251‑10 (MQ=255) aTGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTGAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAAt < 1:707300/188‑1 (MQ=255) aTGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGcagcaa > 1:646663/1‑206 (MQ=255) aTGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACaaaaa > 1:701300/1‑216 (MQ=255) aTGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCgg > 1:66252/1‑251 (MQ=255) cAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACg > 1:48057/1‑251 (MQ=255) aaaTAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACg > 1:764899/1‑250 (MQ=255) atCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCattgt > 1:12777/1‑249 (MQ=255) ccGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGAc < 1:750877/250‑1 (MQ=255) gACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCATCCAACGCATTGTTCATGACAt > 1:15892/1‑250 (MQ=255) ggCTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATctg < 1:461484/245‑3 (MQ=255) cTTCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACcaca < 1:267484/251‑1 (MQ=255) tCAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGcagc < 1:118674/162‑3 (MQ=255) cAAGGAACAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATcc < 1:206365/251‑1 (MQ=255) aCAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAAc > 1:497950/1‑215 (MQ=255) aCAGATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGcc > 1:248450/1‑250 (MQ=255) gATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACaaaaa > 1:469601/1‑164 (MQ=255) gATAACGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGAc > 1:93721/1‑226 (MQ=255) aCGATCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTtcc > 1:312832/1‑202 (MQ=255) aTCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACaaa > 1:852904/1‑155 (MQ=255) aTCGTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATcc > 1:74318/1‑235 (MQ=255) gTCATCACGACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGAt < 1:88655/191‑1 (MQ=255) tcacgACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATg < 1:794054/248‑1 (MQ=255) cgACGGGCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCa > 1:259187/1‑250 (MQ=255) ggCGCGATCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGccc > 1:267651/1‑226 (MQ=255) aTCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAAc < 1:579490/250‑1 (MQ=255) aTCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACt < 1:253501/251‑1 (MQ=255) tCGCCTTTTAAACGATGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTg < 1:586312/251‑1 (MQ=255) atatTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACa < 1:521065/181‑1 (MQ=255) atatTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGc < 1:26919/200‑1 (MQ=255) tatTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCGCCTCCGCTAACTGTTCGGCAAATTgctggat < 1:581962/251‑7 (MQ=255) tatTGCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTgctggat < 1:375007/251‑7 (MQ=255) gCATTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTgctggatcac > 1:409057/1‑241 (MQ=255) aTTAAATCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACctc < 1:14748/251‑1 (MQ=255) aTCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTaa < 1:617525/251‑1 (MQ=255) aTCGAAACTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTaa < 1:786969/251‑1 (MQ=255) aaaCTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAatat < 1:821291/250‑1 (MQ=255) aaaCTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAAtata > 1:534565/1‑251 (MQ=255) aCTGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTaa > 1:727643/1‑245 (MQ=255) tGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAAc < 1:811508/251‑1 (MQ=255) tGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAAc < 1:322303/251‑1 (MQ=255) tGTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAAc < 1:777041/251‑1 (MQ=255) gTTCGGCGCTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAAc > 1:304761/1‑211 (MQ=255) gcgcTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGt < 1:845299/250‑1 (MQ=255) cgcTTGTTGACGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGATCGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAATGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGtt < 1:381713/250‑1 (MQ=255) cgGGTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAgc > 1:119207/1‑56 (MQ=255) ggTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTaa > 1:670424/1‑222 (MQ=255) ggTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAAc < 1:397597/230‑1 (MQ=255) gTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTc < 1:21720/183‑1 (MQ=255) gTATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAatat < 1:209463/224‑1 (MQ=255) tATTCGCCGTCGTTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAAc < 1:271996/228‑1 (MQ=255) tcgtTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGTTTCATCGGTTTccgccgtggcggagaa > 1:578325/1‑241 (MQ=255) cgtTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGTTTCATCGGTTTccgccgtggcggagaag > 1:205563/1‑240 (MQ=255) cgtTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCAGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCa > 1:565006/1‑144 (MQ=255) gtTCATACCGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGt < 1:427831/222‑1 (MQ=255) ccGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGTTTCATCGGTTTCCGCCGTGGCGGAGAAGAATTTATc < 1:66918/251‑1 (MQ=255) ccGAGCAGACAAACTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGCTGGATCACCTCTTTAATATAAAACAGGGTTTCATCGGTTTCCGCCGTGGCGGAGAAGAATTTATc < 1:557273/251‑1 (MQ=255) aaaCTACTCTGAACGGAATAGAGCGCATCGGCAGCAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGGTAGTGATTCGGATTTTCCTCCAACGCATTGTTCATGACATCTGCCACCACATCCACGCCCAACGCGTCGTTAAAATGCACCTCCGCTAACTGTTCGGCAAATTgctggat < 1:379379/181‑7 (MQ=255) | GATGTAATCCAGCAACTGACTCACCAGCACCGACGGCTCCCGCTCCTGATTATCGGCAATAGAACGACCGATGTAGCTGATGTACAAATAATCCTGCGCCGACAGCAAGGCTTCAAGGAACAGATAACGATCGTCATCGCGACGGGCGCGATCGCCTTTTAAGCGGTGATATTGCATTAAATCGAAACTGTTCGGCGCTTGTTGGCGCGGGTATTCGCCGTCGTTCATACCGAGCAGACAAACCACTTTGAACGGAATGGAGCGCATCGGCAACAATGTACAAAAATTCACTTTGCCGGCGAGGAAGCGATAATGGTTCGGATTTTCCTCCAACGCATTATTCATGACATCCGCCACCACATCCACGCCCAACGCGTCGCTAAAATGCACCTCCGCTAACTGTTCGGCAAATTGTCGGATTACCTCTTTAATATAAAACAGGGTTTCATCGGTTTCCGCCGAGGAGGCGAAGAATTTATC > 1/1831437‑1831916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |