| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,829,743 | T→C | intergenic (+47843/+5641) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,829,743 | 0 | T | C | 100.0% | 213.8 / NA | 72 | intergenic (+47843/+5641) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/36); total (36/36) | |||||||||||
GGCATCAGCCAATGGCAATTGGTGCGCCCTGAAGCCTTAAAAGGCGCGATTAATATCGTCGTGCCCGAATCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCATACAGGATCTGTTGCGCAGTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGATGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACACGCGGTGCCTTGGAGCTTAGGCACGC > 1/1829498‑1829984 | ggCATCAGCCAATGGCAATTGGTGCGCCCTGAAGCCTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAAt > 1:668132/1‑251 (MQ=255) cAATTGGTGCGCCCTGAAGCCTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAg > 1:755473/1‑251 (MQ=255) cccTGAAGCCTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCaa > 1:321134/1‑250 (MQ=255) gCCTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGtt > 1:448539/1‑251 (MQ=255) gCCTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGtt > 1:520356/1‑251 (MQ=255) cTTAAAAGGCGCGATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGa > 1:817068/1‑251 (MQ=255) cgATTAATATCGCCGTGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCaa < 1:168220/251‑1 (MQ=255) gtGCCCGAGTCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTcg > 1:741045/1‑250 (MQ=255) gTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGaa < 1:13001/215‑1 (MQ=255) ttCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACa < 1:41185/250‑1 (MQ=255) ttCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACAt < 1:665475/251‑1 (MQ=255) cGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACAt < 1:126190/249‑1 (MQ=255) tGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCg > 1:267401/1‑251 (MQ=255) ggTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCg > 1:50955/1‑250 (MQ=255) gCAACAACCCATCGCGCAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGc > 1:642183/1‑160 (MQ=255) acccatcgcgcAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAg > 1:251653/11‑250 (MQ=255) acccatcgcgcAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAg > 1:433296/11‑250 (MQ=255) cccatcgcgcAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCa > 1:161868/10‑251 (MQ=255) ccatcgcgcAGGACCTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCaa < 1:183015/243‑1 (MQ=255) ggaccTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGa > 1:348570/5‑251 (MQ=255) ggaccTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGa > 1:130457/5‑251 (MQ=255) gaccTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAAc < 1:254142/148‑1 (MQ=255) gaccTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGAt > 1:483417/4‑251 (MQ=255) gaccTGTTGCGCGCTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGAt > 1:662154/4‑251 (MQ=255) cgctctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGa < 1:725801/247‑1 (MQ=255) cgctctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGa < 1:843599/247‑1 (MQ=255) ctctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCaaa < 1:75682/218‑1 (MQ=255) ctctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGAtt > 1:817274/2‑250 (MQ=255) ctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAActc > 1:393438/1‑207 (MQ=255) ctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAActc > 1:352685/1‑207 (MQ=255) ctcACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAg > 1:463736/1‑240 (MQ=255) tGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGTCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATa > 1:859654/1‑250 (MQ=255) tGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATac < 1:212539/251‑1 (MQ=255) gCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGaa > 1:199309/1‑133 (MQ=255) cAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTtctc > 1:151318/1‑250 (MQ=255) cAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTcc < 1:325038/251‑1 (MQ=255) gTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTggcgg > 1:828749/1‑192 (MQ=255) cTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGa > 1:113743/1‑251 (MQ=255) tGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGaa < 1:311749/251‑1 (MQ=255) gAATATCTCCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGa < 1:60850/220‑1 (MQ=255) gAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTg < 1:560355/248‑1 (MQ=255) gAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGaa > 1:19086/1‑250 (MQ=255) atatCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGcc > 1:333369/1‑224 (MQ=255) atatCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAAATCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAAccc < 1:290687/251‑1 (MQ=255) tatCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAAcc > 1:765584/1‑249 (MQ=255) ccTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGaaa < 1:11102/164‑1 (MQ=255) tttGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGAttt < 1:486999/251‑1 (MQ=255) gcTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAAc < 1:174957/233‑1 (MQ=255) tATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTAtct < 1:68810/251‑1 (MQ=255) aTTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAAc < 1:443407/225‑1 (MQ=255) aTTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTAtct > 1:105965/1‑250 (MQ=255) aTTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTAtc < 1:256605/249‑1 (MQ=255) ttGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCAt > 1:92643/1‑251 (MQ=255) ttGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCAt < 1:869665/251‑1 (MQ=255) ttGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCAt < 1:572295/251‑1 (MQ=255) gTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCa > 1:559997/1‑251 (MQ=255) tCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGc < 1:184252/249‑1 (MQ=255) aaCCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTcc > 1:860128/1‑206 (MQ=255) cacCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGAttt < 1:185396/219‑1 (MQ=255) cacCGTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGca > 1:102124/1‑250 (MQ=255) gTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTAtc < 1:3980/229‑1 (MQ=255) gTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACAcg > 1:787114/1‑250 (MQ=255) gTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACAcg > 1:199126/1‑250 (MQ=255) gTCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAACGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTcc < 1:102084/197‑1 (MQ=255) tCAATTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACAcgcg < 1:405109/251‑1 (MQ=255) aaTTATTGGCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTAtc < 1:883756/226‑1 (MQ=255) ggCTACTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATc < 1:700393/76‑1 (MQ=255) tcTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAGCCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACACGCGATGCCTTGGAGCt < 1:740684/250‑1 (MQ=255) cTCCATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGa < 1:115473/197‑1 (MQ=255) ccATAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGc < 1:9699/221‑1 (MQ=255) tAAAAACGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGAt < 1:44859/199‑1 (MQ=255) aaaCGCCGACGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTCAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACACGCGATGCCTTGGAGCTTAGGCAcac < 1:424252/251‑3 (MQ=255) | GGCATCAGCCAATGGCAATTGGTGCGCCCTGAAGCCTTAAAAGGCGCGATTAATATCGTCGTGCCCGAATCGGTTCGTTTGGTTATCGTGAGCCATCAAAATCTGTTGCAACAACCCATCATACAGGATCTGTTGCGCAGTCTCACACTTGATAGCACGCAAGTGCTGAATATCACCTTTGAGCAGCTTGCCTATTTGCAAGTCAACCACACCGTCAATTATTGGCTACTCCATAAAAACGCCGATGAAATCCACCGCACTTTAAGCGGGCTGCAACAGCCGTTGAATGTCTGGCAATCCGTCGATCTCGCCGCGTTTAAACATGATCCGCAGGCGAAACGCCAACTCTGGCGGCAAATTCAGCAATCCGCACCGATAAAGTAAGGATTCGCCGTGATACACATTTCTCCTATTGAACCCTCGGATTTTGATCGTCTTTATCTCATTGAGCAGGCGGCACACGCGGTGCCTTGGAGCTTAGGCACGC > 1/1829498‑1829984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |