| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,828,975 | G→A | intergenic (+47075/+6409) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,828,975 | 0 | G | A | 98.6% | 205.7 / ‑4.8 | 70 | intergenic (+47075/+6409) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (46/23); total (46/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
GTTGAATATAACTGCCGATCACTCCCGCGCCGCAGCCCACGTCCAACACCCCGCCTGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGTTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAATTTGTGGCGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAACTGAAAATGATACAGACTGCAACGGCGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACGCCGCTACGATTTTCGCCCACCAGCAAAACCTCCTGCCCGGCGGTGCATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTGGCGTTTGATGTTGTCTGT > 1/1828737‑1829219 | gTTGAATATAACTGCCAATCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCg > 1:151337/1‑251 (MQ=255)gTTGAATATAACTGCCAATCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGAGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCg > 1:510831/1‑251 (MQ=255) gAATATAACTGCCAATCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGAtt > 1:658031/1‑251 (MQ=255) gAATATAACTGCCAATCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGAtt > 1:180815/1‑251 (MQ=255) atatAACTGCCAATCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCGGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGAtttt > 1:615956/1‑251 (MQ=255) gccaaTCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAatat > 1:791005/5‑251 (MQ=255) ccGATCACTCCCGCGCCGCAGCCCACGTCCAGCACCTCGCCTGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGTTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAATTTGTGGCGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAACTGAAAATGATACAGACTGCAACGGCGGGCGGAGTCGATTTTGTGAatat < 1:11417/250‑1 (MQ=255) aaTCACCCCTGCGCCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCg > 1:393609/2‑250 (MQ=255) cacccctgcgcCGCAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGt > 1:839009/8‑251 (MQ=255) gcAGCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCa > 1:374079/1‑251 (MQ=255) gCCCACGTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAatat > 1:381684/1‑230 (MQ=255) gTCCAACGCCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCAtttttt < 1:751717/248‑1 (MQ=255) gTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGa < 1:726661/220‑1 (MQ=255) gTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAata < 1:716407/223‑1 (MQ=255) gTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTcgg > 1:364997/1‑251 (MQ=255) gTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTcgg > 1:406534/1‑251 (MQ=255) gTCCAACACCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTcgg > 1:874023/1‑251 (MQ=255) cacCTCGCCCGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGTCGGaa > 1:276473/1‑250 (MQ=255) ccgcccgcGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAacgcac < 1:782685/251‑1 (MQ=255) cccgCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAacgcacacc < 1:235148/248‑4 (MQ=255) cccgCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAacgcacacc < 1:685270/248‑4 (MQ=255) cccgCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAacgcacac < 1:831075/247‑3 (MQ=255) gTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTaa > 1:109320/1‑211 (MQ=255) gTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGa > 1:645805/1‑250 (MQ=255) ttttttAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGAtt < 1:7695/251‑1 (MQ=255) tttttAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCAtttttt < 1:391161/225‑1 (MQ=255) cAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGTTAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTaaaa > 1:327340/1‑251 (MQ=255) cAATAATGCCGTGCCGCCATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTaaaa > 1:267767/1‑251 (MQ=255) ccgccATCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCcgg > 1:726689/1‑250 (MQ=255) aTCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGa > 1:366719/1‑214 (MQ=255) aTCCAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCCCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGta > 1:768600/1‑249 (MQ=255) ccAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt < 1:452063/251‑1 (MQ=255) ccAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt < 1:899841/251‑1 (MQ=255) ccAGCTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt < 1:385221/251‑1 (MQ=255) cTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAg > 1:150425/1‑248 (MQ=255) gAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt < 1:599727/235‑1 (MQ=255) gAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCa > 1:699636/1‑251 (MQ=255) gAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCa > 1:194344/1‑251 (MQ=255) gAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCa > 1:110471/1‑251 (MQ=255) gCAACGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTgag < 1:275620/230‑1 (MQ=255) aCGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATgg > 1:99561/1‑251 (MQ=255) cGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGa > 1:352346/1‑181 (MQ=255) cGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATgg > 1:845888/1‑250 (MQ=255) cGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATgg > 1:749738/1‑250 (MQ=255) cGCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATgg > 1:212149/1‑250 (MQ=255) gCATAGATAGTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCa > 1:169108/1‑251 (MQ=255) atagTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAacgcgcaccactacg > 1:217985/1‑162 (MQ=255) tagTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTc > 1:529807/1‑247 (MQ=255) tagTTAAATCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTc > 1:783633/1‑247 (MQ=255) aaTCGGCAAGTTGCGACGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTAttc < 1:244789/251‑1 (MQ=255) gATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt > 1:34984/1‑189 (MQ=255) gATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAg > 1:381789/1‑251 (MQ=255) tAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATcac < 1:193855/251‑1 (MQ=255) aTTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATc < 1:6723/250‑1 (MQ=255) aTTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCg < 1:688114/251‑1 (MQ=255) tCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGgcg < 1:794608/251‑1 (MQ=255) tCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGgcg > 1:55890/1‑251 (MQ=255) ttCAGTTCAAAGTGCGGTGGATTTTTTAATTGAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGaaa < 1:821885/251‑1 (MQ=255) gAAAATGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTgg > 1:53459/1‑250 (MQ=255) aaaTGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGaaa > 1:772392/1‑159 (MQ=255) aTGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACAt > 1:392336/1‑130 (MQ=255) aTGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTgagag > 1:105046/1‑138 (MQ=255) aTGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAggg > 1:105341/1‑224 (MQ=255) aTGATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAAt < 1:520717/230‑1 (MQ=255) gATACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTAttc > 1:311964/1‑173 (MQ=255) aTACAGACTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTGGCGTTTggt > 1:414259/1‑249 (MQ=255) cTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATcaca < 1:807440/189‑1 (MQ=255) cTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACttt > 1:233494/1‑232 (MQ=255) cTGCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTGGCGTTTggtg < 1:741319/245‑4 (MQ=255) gCAACGACGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACACCACTACGATTTTCGCCCACCAGTAAAACTTCCTGTCCGGCGGTACATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTGGCGTTTGGTGTTGTcggt > 1:369840/1‑248 (MQ=255) | GTTGAATATAACTGCCGATCACTCCCGCGCCGCAGCCCACGTCCAACACCCCGCCTGCGATGTTTTTTAGCGTAGAAAGCAATAATGCCGTGCCGCCATCCAGTTCGGCGGCGCTGAATACGCCGGGCAACGCATAGATAGTTAAATCGGCAATTTGTGGCGATTGATAGGATTTCCAGAAAGTTTTCAGTTCAAAGTGCGGTGGATTTTTTAACTGAAAATGATACAGACTGCAACGGCGGGCGGAGTCGATTTTGTGAATATCGCCGTAATCGGCAAGCATTTTTTCGGCGGAACGCACGCCGCTACGATTTTCGCCCACCAGCAAAACCTCCTGCCCGGCGGTGCATTGTGAGAGAAGCTGCATGAGCTGGAAATGGCATTCCTGTTTATTCTTCGTCCAATAAAACAGGATCACATCGGCGCTGCCATGAAATTCAAGGGAAAAATCCACCGCACTTTGTGGCGTTTGATGTTGTCTGT > 1/1828737‑1829219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |