Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,827,043 G→A intergenic (+45143/+8341) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,827,0430GA100.0% 184.4 / NA 62intergenic (+45143/+8341)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (26/36);  total (26/36)

ACGTTCACATAATCGGCGCCGAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGGGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACGCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAACGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATATCTCTGCCAA  >  1/1826803‑1827288
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     
ccGTTCACATAATCGGCGCCAATTTTTTCTTCCCCCCGCTCAAGGGCGCGCTTTCCCAAATTTTCCGCTTATTCAAAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATc                                                                                                                                                                                                                                             <  1:476774/250‑1 (MQ=255)
     cacaTAATCGGCGCCGAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGa                                                                                                                                                                                                                                        >  1:118864/1‑251 (MQ=255)
     cacaTAATCGGCGCCGAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGa                                                                                                                                                                                                                                        >  1:513890/1‑251 (MQ=255)
     cacaTAATCGGCGCCGAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGa                                                                                                                                                                                                                                        >  1:208461/1‑251 (MQ=255)
                    gAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACtttttt                                                                                                                                                                                                                         >  1:590010/1‑251 (MQ=255)
                                      cTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTtctc                                                                                                                                                                                                         >  1:588356/1‑249 (MQ=255)
                                      cTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTtctc                                                                                                                                                                                                         >  1:393302/1‑249 (MQ=255)
                                       taaagggcggtttttcccACATTGTCCGCTTATCCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTctccac                                                                                                                                                                                                      <  1:364726/235‑3 (MQ=255)
                                        cAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTctcct                                                                                                                                                                                                       >  1:299566/1‑249 (MQ=255)
                                         aagagcgggctttcccaaaaTGCCCGCTTATCCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTG‑ATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTg                                                                                                                                                                                                   <  1:486655/233‑1 (MQ=255)
                                          aTAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATACTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTg                                                                                                                                                                                                   >  1:486348/1‑251 (MQ=255)
                                                         ccattttCCGCGTATCCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAAc                                                                                                                                                                                    <  1:687176/245‑1 (MQ=255)
                                                           aaaaaagacggtcccacaACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTg                                                                                                                                                                                  <  1:36994/237‑1 (MQ=255)
                                                              gTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGt                                                                                                                                                                                                 >  1:321877/1‑233 (MQ=255)
                                                               tCCGCGTATTAAAAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCgg                                                                                                                                                                               <  1:843877/250‑1 (MQ=255)
                                                                     ttttCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTg                                                                                                                                                                        <  1:501552/249‑1 (MQ=255)
                                                                     tttacaaaaCCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTg                                                                                                                                                                        <  1:723401/244‑1 (MQ=255)
                                                                     tATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTg                                                                                                                                                                        <  1:53088/251‑1 (MQ=255)
                                                                      aTTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGt                                                                                                                                                                       <  1:296035/251‑1 (MQ=255)
                                                                        ccacaACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTAc                                                                                                                                                                     <  1:629424/250‑1 (MQ=255)
                                                                        caaaaaCCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTAc                                                                                                                                                                     <  1:559086/247‑1 (MQ=255)
                                                                          acaACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTc                                                                                                                                                                   <  1:354299/251‑1 (MQ=255)
                                                                               cGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGaa                                                                                                                                                                                     >  1:730328/1‑228 (MQ=255)
                                                                                 ccATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAAc                                                                                                                                                                                    >  1:472171/1‑227 (MQ=255)
                                                                                 ccATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTc                                                                                                                                                                   >  1:599634/1‑244 (MQ=255)
                                                                                    taataaCGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTAc                                                                                                                                                                     >  1:236375/1‑239 (MQ=255)
                                                                                          cGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAAt                                                                                                                                                   <  1:82076/251‑1 (MQ=255)
                                                                                                cccGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTtaat                                                                                                                                             <  1:494775/251‑1 (MQ=255)
                                                                                                   gggTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGt                                                                                                                                                                       <  1:58006/222‑1 (MQ=255)
                                                                                                    ggTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGt                                                                                                                                                                                                 >  1:630300/1‑195 (MQ=255)
                                                                                                        gCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGaa                                                                                                                                                                                     <  1:669966/203‑1 (MQ=255)
                                                                                                         ccTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTATGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGt                                                                                                                                                                       <  1:430652/216‑1 (MQ=255)
                                                                                                                               aTTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAAtt                                                                                                              >  1:171209/1‑251 (MQ=255)
                                                                                                                                       ccTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTctcc                                                                                                                                                                                                        <  1:611648/153‑1 (MQ=255)
                                                                                                                                              cTTGCATTACGCGCGGGCTGGCACAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCaa                                                                                                                                                         <  1:449998/193‑1 (MQ=255)
                                                                                                                                                tGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACt                                                                                              >  1:60902/1‑250 (MQ=255)
                                                                                                                                                  cATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGAtg                                                                                                                                  >  1:375764/1‑212 (MQ=255)
                                                                                                                                                         cgcgGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTAt                                                                                     <  1:786364/250‑1 (MQ=255)
                                                                                                                                                             ggCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGt                                                                                 >  1:639676/1‑250 (MQ=255)
                                                                                                                                                               cTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCgg                                                                              <  1:853504/251‑1 (MQ=255)
                                                                                                                                                                       gTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAAc                                                                                                                                          >  1:202877/1‑183 (MQ=255)
                                                                                                                                                                                  cGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGt                                                                                                                                                                                                 >  1:50035/1‑117 (MQ=255)
                                                                                                                                                                                  cGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCa                                                             <  1:826473/249‑1 (MQ=255)
                                                                                                                                                                                   gATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACt                                                                                                                                                                                                                              <  1:63362/87‑1 (MQ=255)
                                                                                                                                                                                         ttCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGaaaa                                                                                                       >  1:279610/1‑200 (MQ=255)
                                                                                                                                                                                           cGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGgtgt                                                  <  1:146593/251‑1 (MQ=255)
                                                                                                                                                                                              tatGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGc                                               <  1:193458/251‑1 (MQ=255)
                                                                                                                                                                                                 gTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTTTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTc                                                                                >  1:197966/1‑215 (MQ=255)
                                                                                                                                                                                                   tcttcCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCttttt                                          <  1:343232/251‑1 (MQ=255)
                                                                                                                                                                                                    cttcCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGTAAGCAAGCTGTGGTGTAGCtttttt                                         >  1:485504/1‑251 (MQ=255)
                                                                                                                                                                                                                      cATTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTa                       >  1:105548/1‑251 (MQ=255)
                                                                                                                                                                                                                       aTTTTGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAAt                                                                                                               >  1:710893/1‑162 (MQ=255)
                                                                                                                                                                                                                          ttGAATAGCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTg                                                                      <  1:502995/200‑1 (MQ=255)
                                                                                                                                                                                                                                 gCTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTc                                                                                                                                                                   <  1:901127/100‑1 (MQ=255)
                                                                                                                                                                                                                                  cTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTcatcat             <  1:328316/249‑1 (MQ=255)
                                                                                                                                                                                                                                  cTTGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCata            <  1:54551/250‑1 (MQ=255)
                                                                                                                                                                                                                                   ttGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATAtc          <  1:659902/251‑1 (MQ=255)
                                                                                                                                                                                                                                   ttGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATAtc          <  1:495402/251‑1 (MQ=255)
                                                                                                                                                                                                                                   ttGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATAtc          <  1:29813/251‑1 (MQ=255)
                                                                                                                                                                                                                                   ttGCCATAACACGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACACGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATAtc          <  1:49685/251‑1 (MQ=255)
                                                                                                                                                                                                                                           acacGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTc                                                                                                                       <  1:386495/134‑1 (MQ=255)
                                                                                                                                                                                                                                           acacGAGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACTCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAAAGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATATCTCTGCCaa  >  1:391984/1‑251 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                     
ACGTTCACATAATCGGCGCCGAATAATTCTTTCGCACGCTCAATAGCGAGCTGTTCCACAATGTCCGCGTATTCACAACCGCCATAATAACGCTTGCCCGGGTAGCCTTCCGCATATTTGTTGGTGAATTGGGAACCTTGCGCTTGCATTACGCGCGGGCTGGCATAGTTTTCAGAAGCGATTAATTCGATATGTTCTTCCTGGCGGCGGTTTTCATTTTGAATAGCTTGCCATAACACGGGATCGTAATCGGCGATGTTCATACTTTTTTTAAACATGGTGTTCTCCTCTTGGTAGTGAATTGGAACTGCGGTCTATTGTACTCAATTTCGCAATAAAATCTTAATAACGCCGGATGTGTTTTTTTTCATTCTAATTATGAAAATTTTTCACTCGGCAGTATTTGTCGGTGTTATTGGCGAACGCAAGCTGTGGTGTAGCTTTTTTGTGCTGTTTTTTGCGTTAAAGTCATCATATCTCTGCCAA  >  1/1826803‑1827288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑