Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,820,539 G→A intergenic (+38639/+14845) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,820,5390GA100.0% 188.7 / NA 67intergenic (+38639/+14845)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (50/17);  total (50/17)

TACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATTACATTCAATGTTGAAAATCCACGGTGAACCAGGACTTTATCCATCACGACTTGAAAAAAGAGTGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACGGCAGGAATAAACCAGGTAAAGTCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGATGCAATTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGAATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTTAATAAAATAAAGTGTTCACCATCATCACGCCAAGCCAATGCCGGTAAATGTAAAAAAGGCAATCTGTCAACTGTTTT  >  1/1820298‑1820772
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                         
tgcTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAAttt                                                                                                                                                                                                                                   <  1:378813/248‑1 (MQ=255)
            acaCATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTc                                                                                                                                                                                                                        >  1:95941/3‑249 (MQ=255)
             caCATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTa                                                                                                                                                                                                                     >  1:83531/2‑251 (MQ=255)
               cATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAAttt                                                                                                                                                                                                                                   >  1:703163/1‑235 (MQ=255)
                   ggTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGAGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAg                                                                                                                                                                                                               >  1:401112/1‑251 (MQ=255)
                    gttctcagcccccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                                                                                                                                                 >  1:300907/13‑248 (MQ=255)
                    gttctcagcccccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGa                                                                                                                                                                                                              >  1:527488/13‑251 (MQ=255)
                               ccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCGATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGacg                                                                                                                                                                                                   >  1:62356/2‑249 (MQ=255)
                               ccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGacg                                                                                                                                                                                                   >  1:63219/2‑249 (MQ=255)
                                                   aGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCtt                                                                                                                                                                               >  1:132698/1‑251 (MQ=255)
                                                    gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCttt                                                                                                                                                                              >  1:227416/1‑251 (MQ=255)
                                                    gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCttt                                                                                                                                                                              >  1:560011/1‑251 (MQ=255)
                                                    gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGCGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTAc                                                                                                                                                                                                                    >  1:764145/1‑213 (MQ=255)
                                                      cTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATc                                                                                                                                                                                        >  1:829824/1‑239 (MQ=255)
                                                      cTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGa                                                                                                                                                                            >  1:349983/1‑251 (MQ=255)
                                                            tAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                                                                                                                                                 >  1:876964/1‑208 (MQ=255)
                                                              gCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGtt                                                                                                                                                                     >  1:98813/1‑250 (MQ=255)
                                                                        cTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCa                                                                                                                                                          >  1:702999/1‑251 (MQ=255)
                                                                        aggTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCa                                                                                                                                                          >  1:47721/3‑251 (MQ=255)
                                                                                      aaTGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAAc                                                                                                                                            <  1:724083/251‑1 (MQ=255)
                                                                                                     cGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAAc                                                                                                                                            >  1:598554/1‑236 (MQ=255)
                                                                                                         gAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCAtt                                                                                                                         >  1:333185/1‑251 (MQ=255)
                                                                                                          aaCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATg                                                                                                                                                                                                            <  1:141377/167‑1 (MQ=255)
                                                                                                          aaCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGt                                                                                                                                                                      >  1:683780/1‑205 (MQ=255)
                                                                                                           aCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAg                                                                                                                       >  1:683547/1‑251 (MQ=255)
                                                                                                             caagaccttATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGAt                                                                                                                     <  1:314564/244‑1 (MQ=255)
                                                                                                                gaccttATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGcgcg                                                                                                                                                                                                        >  1:713415/5‑165 (MQ=255)
                                                                                                                 accttATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTAc                                                                                                                                                                                                                    >  1:862197/4‑152 (MQ=255)
                                                                                                                   cttATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCaaaaa                                                                                                               <  1:497234/250‑1 (MQ=255)
                                                                                                                                aCTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGAt                                                                                                   <  1:72530/250‑1 (MQ=255)
                                                                                                                                 cTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCg                                                                                                 >  1:414826/1‑251 (MQ=255)
                                                                                                                                    gAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGtt                                                                                              >  1:83480/1‑251 (MQ=255)
                                                                                                                                           gagcggtgTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                                                                                                                                                 >  1:545749/5‑129 (MQ=255)
                                                                                                                                               ggtgTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTAc                                                                                                                                                                                                                    >  1:745146/1‑122 (MQ=255)
                                                                                                                                               ggtgTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATg                                                                                                                                                                                                            >  1:381920/1‑130 (MQ=255)
                                                                                                                                               ggtgTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGttcttc                                                                                                                                                                 <  1:598455/173‑1 (MQ=255)
                                                                                                                                               ggtgTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTAt                                                                                   >  1:538728/1‑251 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTAc                                                                                                                                                                                                                    >  1:384974/1‑121 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                                                                                                                                                 >  1:129780/1‑124 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCAtttt                                                                                                                                                      >  1:14381/1‑183 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAg                                                                                                                                       <  1:671927/198‑1 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTAtt                                                                                  >  1:656098/1‑251 (MQ=255)
                                                                                                                                                gtgtAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTAtt                                                                                  >  1:252514/1‑251 (MQ=255)
                                                                                                                                                         gTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAgg                                                                                                          <  1:343534/218‑1 (MQ=255)
                                                                                                                                                         gTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCaataaa                                                                         >  1:681118/1‑251 (MQ=255)
                                                                                                                                                         gTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCaataaa                                                                         >  1:686088/1‑251 (MQ=255)
                                                                                                                                                         gTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCaataaa                                                                         >  1:849964/1‑251 (MQ=255)
                                                                                                                                                             aaaaaTTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCaataaaataa                                                                     <  1:567909/251‑1 (MQ=255)
                                                                                                                                                                  tttGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAgtgg                                                                <  1:195016/251‑2 (MQ=255)
                                                                                                                                                                                    cGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTaaaa                                                                                                                                                                                          <  1:87515/111‑1 (MQ=255)
                                                                                                                                                                                    cGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACgccaa                                              >  1:885193/1‑251 (MQ=255)
                                                                                                                                                                                             tttCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAAtac                                      <  1:93367/250‑3 (MQ=255)
                                                                                                                                                                                                                gTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGAt                                                                                                                                    >  1:862863/1‑137 (MQ=255)
                                                                                                                                                                                                                gTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATg                                                                                                             >  1:600105/1‑160 (MQ=255)
                                                                                                                                                                                                                gTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGtt                                                                                              >  1:472839/1‑175 (MQ=255)
                                                                                                                                                                                                                gTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACgccaagcc                                           <  1:481532/226‑1 (MQ=255)
                                                                                                                                                                                                                gTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAATACCGGTAAATGTAAAAAAggta                  >  1:431418/1‑249 (MQ=255)
                                                                                                                                                                                                                  aTTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACgccaagc                                            >  1:571277/1‑223 (MQ=255)
                                                                                                                                                                                                                  aTTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAAtac                                      <  1:618817/229‑3 (MQ=255)
                                                                                                                                                                                                                     tAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTcaat                                                                            >  1:778095/1‑188 (MQ=255)
                                                                                                                                                                                                                           cagCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTg                                                                                         >  1:322745/3‑169 (MQ=255)
                                                                                                                                                                                                                              cAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAATACCGGTAAATGTAAAAAAGGTAATCTATCAATTGt     <  1:570325/250‑1 (MQ=255)
                                                                                                                                                                                                                                ggAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAAc                                                                                                                                            >  1:553291/1‑113 (MQ=255)
                                                                                                                                                                                                                                ggAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAgt                                                                  >  1:472245/1‑187 (MQ=255)
                                                                                                                                                                                                                                ggAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAATACCGGTAAATGTAAAAAAGGTAATCTATCAATTGtttt  >  1:541494/1‑251 (MQ=255)
                                                                                                                                                                                                                                 gAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCAATAAAATAAAGTGGTCACCATCATCACGCCAAGCCAAtac                                      <  1:814704/214‑3 (MQ=255)
                                                                                                                                                                                                                                      aaCCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTCaataaaat                                                                       >  1:847325/1‑176 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                         
TACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATTACATTCAATGTTGAAAATCCACGGTGAACCAGGACTTTATCCATCACGACTTGAAAAAAGAGTGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACGGCAGGAATAAACCAGGTAAAGTCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGATGCAATTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGAATTAGATCAAAAATGAGGTAACGATCGGTTTCTTGATCTATTTTTAATAAAATAAAGTGTTCACCATCATCACGCCAAGCCAATGCCGGTAAATGTAAAAAAGGCAATCTGTCAACTGTTTT  >  1/1820298‑1820772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑